Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 1.1e-303 1045.8 512 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 6.9e-101 372.1 298 60.1
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 9.1e-101 371.7 296 59.1
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 1.3e-99 367.9 283 60.4
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 1.2e-97 361.3 292 56.5
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 4.8e-86 322.8 284 54.2
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 4.1e-85 319.7 287 54.4
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 2.0e-84 317.4 279 56.3
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 2.0e-84 317.4 290 54.1
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 2.6e-84 317.0 282 55.0
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.0e-83 315.1 284 53.2
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 5.0e-83 312.8 299 51.2
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 8.5e-83 312.0 284 51.4
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 1.1e-82 311.6 299 50.8
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 1.1e-82 311.6 284 51.4
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 3.2e-82 310.1 313 48.6
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 5.5e-82 309.3 282 53.2
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 7.2e-82 308.9 284 52.1
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 7.2e-82 308.9 285 53.0
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 9.4e-82 308.5 290 52.4
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.1e-81 307.4 284 52.1
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.7e-81 307.0 284 51.4
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 8.0e-81 305.4 281 51.2
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 1.0e-80 305.1 279 52.3
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 8.8e-80 302.0 289 49.8
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 5.7e-79 299.3 271 54.6
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 5.7e-79 299.3 290 51.7
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 9.7e-79 298.5 287 50.5
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 1.7e-78 297.7 285 53.7
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 3.7e-78 296.6 287 51.9
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 4.2e-74 283.1 304 49.3
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.2e-73 281.6 248 56.9
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 9.8e-71 271.9 295 49.5
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 1.8e-69 267.7 262 49.6
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 1.0e-67 261.9 309 45.3
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 2.3e-67 260.8 240 52.9
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.4e-64 251.5 271 47.6
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 4.0e-64 250.0 243 51.9
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 1.3e-59 235.0 256 47.7
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.5e-58 231.5 221 53.8
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 7.3e-58 229.2 237 49.4
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 1.7e-46 191.4 146 58.9
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 2.4e-45 187.6 168 56.5
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.5e-42 178.3 151 51.0
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 2.2e-38 164.5 158 50.6
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 3.0e-35 154.1 144 49.3
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 1.6e-28 131.7 148 48.0
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 2.3e-27 127.9 135 48.9
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.6e-26 122.5 203 40.9
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.2e-25 119.8 139 47.5
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.4e-24 117.9 137 46.7
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 2.4e-24 117.9 135 45.9
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 9.9e-23 112.5 82 58.5
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.6e-15 87.8 101 48.5
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 1.9e-13 81.6 94 47.9
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 9.6e-10 69.3 128 35.2


User provided reference genes

Program Settings