Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.4e-190 669.1 457 100.0
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.8e-21 107.5 224 36.2
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 1.3e-18 98.6 217 36.4
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.3e-18 98.6 191 37.2
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 2.9e-18 97.4 217 38.2
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 3.8e-18 97.1 221 35.7
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 5.0e-18 96.7 186 38.2
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 6.6e-18 96.3 186 38.7
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 8.6e-18 95.9 195 36.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.9e-17 94.7 188 38.3
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.5e-17 94.4 186 38.2
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.5e-17 94.4 224 36.2
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 4.2e-17 93.6 198 34.3
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 4.2e-17 93.6 208 35.6
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 5.5e-17 93.2 186 38.7
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 9.5e-17 92.4 220 34.1
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 9.5e-17 92.4 215 35.8
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 1.2e-16 92.0 226 36.3
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.2e-16 92.0 189 36.5
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.2e-16 92.0 216 35.2
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 1.2e-16 92.0 164 38.4
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.6e-16 91.7 170 37.6
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 1.6e-16 91.7 186 37.6
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 2.1e-16 91.3 195 38.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 2.8e-16 90.9 187 36.4
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 3.6e-16 90.5 186 37.1
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 4.7e-16 90.1 210 33.8
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 4.7e-16 90.1 187 38.0
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 8.0e-16 89.4 170 37.1
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 8.0e-16 89.4 200 35.0
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 8.0e-16 89.4 228 33.8
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.0e-15 89.0 195 33.8
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 1.4e-15 88.6 216 35.6
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.8e-15 88.2 188 34.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.8e-15 88.2 189 38.6
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.8e-15 88.2 189 38.6
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.3e-15 87.8 186 37.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.3e-15 87.8 186 37.1
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 3.0e-15 87.4 210 33.3
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 3.0e-15 87.4 218 34.9
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 4.0e-15 87.0 181 34.3
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 5.2e-15 86.7 180 34.4
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 5.2e-15 86.7 166 35.5
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 6.8e-15 86.3 210 33.8
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 6.8e-15 86.3 225 33.3
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 6.8e-15 86.3 229 32.8
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 6.8e-15 86.3 180 35.0
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 6.8e-15 86.3 180 35.0
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 6.8e-15 86.3 170 37.1
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 8.9e-15 85.9 187 33.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 8.9e-15 85.9 168 36.3
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.2e-14 85.5 180 35.0
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.2e-14 85.5 163 39.3
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.5e-14 85.1 186 35.5
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 1.5e-14 85.1 214 31.8
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.0e-14 84.7 163 38.0
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.0e-14 84.7 205 32.7
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.0e-14 84.7 205 32.7
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 2.0e-14 84.7 182 36.3
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.6e-14 84.3 180 33.9
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 2.6e-14 84.3 199 34.2
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.6e-14 84.3 214 32.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.4e-14 84.0 166 35.5
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.4e-14 84.0 215 32.6
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 3.4e-14 84.0 188 36.2
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 3.4e-14 84.0 220 35.9
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.4e-14 83.6 189 38.1
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 4.4e-14 83.6 184 35.3
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 4.4e-14 83.6 184 35.3
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 7.5e-14 82.8 186 36.0
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 7.5e-14 82.8 190 36.3
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 9.8e-14 82.4 180 33.9
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 9.8e-14 82.4 186 36.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 9.8e-14 82.4 186 34.9
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 9.8e-14 82.4 186 34.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 9.8e-14 82.4 218 33.0
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.3e-13 82.0 222 36.9
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.7e-13 81.6 186 36.0
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 1.7e-13 81.6 228 32.0
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 1.7e-13 81.6 208 34.1
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.7e-13 81.6 190 33.2
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.2e-13 81.3 185 35.7
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.2e-13 81.3 219 33.3
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 3.7e-13 80.5 188 34.6
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 3.7e-13 80.5 165 35.8
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 4.9e-13 80.1 218 33.0
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 4.9e-13 80.1 219 32.9
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.9e-13 80.1 180 34.4
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 4.9e-13 80.1 160 35.6
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 4.9e-13 80.1 218 33.0
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 8.3e-13 79.3 215 33.0
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 8.3e-13 79.3 196 30.6
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.1e-12 79.0 219 32.4
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 1.1e-12 79.0 223 33.2
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.4e-12 78.6 204 32.8
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.8e-12 78.2 196 30.6
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.8e-12 78.2 186 35.5
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 2.4e-12 77.8 212 31.1
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 4.1e-12 77.0 199 32.7
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 7.0e-12 76.3 159 34.6
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 7.0e-12 76.3 191 31.9
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.2e-12 75.9 165 35.2
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 9.2e-12 75.9 225 33.8
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 9.2e-12 75.9 197 32.5
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.6e-11 75.1 225 33.3
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.7e-11 74.3 225 33.3
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.7e-11 74.3 223 32.7
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.0e-10 72.4 172 32.6
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.0e-10 72.4 212 31.6
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 1.0e-10 72.4 226 31.9
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.3e-10 72.0 212 30.7
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 1.7e-10 71.6 220 33.2
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 2.3e-10 71.2 111 40.5
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.5e-09 68.6 222 29.7
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.9e-09 68.2 134 38.8
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 1.9e-09 68.2 107 41.1
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.5e-09 67.8 232 30.6
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.3e-09 66.2 184 31.5
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.2e-08 65.5 72 52.8
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 4.7e-08 63.5 111 40.5
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 6.1e-08 63.2 116 40.5
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 8.0e-08 62.8 181 29.8
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-07 62.4 109 40.4
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 8.9e-07 59.3 271 29.2
Cre02.g095850 Chlamydomonas reinhardtii HOM05D005155 ORTHO05D006266 4.4e-06 57.0 225 29.8
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.8e-06 56.6 177 31.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 5.8e-06 56.6 141 36.2


User provided reference genes

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