Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 1.9e-43 178.7 88 100.0
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 1.4e-25 119.4 85 70.6
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.8e-25 119.0 77 75.3
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 2.4e-25 118.6 78 71.8
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 5.3e-25 117.5 78 70.5
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 2.6e-24 115.2 75 72.0
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 1.1e-22 109.8 78 67.9
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 7.1e-22 107.1 83 66.3
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 2.1e-21 105.5 78 67.9
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 2.1e-21 105.5 78 67.9
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.7e-21 105.1 79 65.8
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 2.7e-21 105.1 80 67.5
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 2.7e-21 105.1 80 67.5
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 4.6e-21 104.4 84 61.9
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 67.9
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 66.7
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 4.6e-21 104.4 78 66.7
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 4.6e-21 104.4 75 66.7
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 4.6e-21 104.4 75 68.0
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 6.1e-21 104.0 85 60.0
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 7.9e-21 103.6 78 65.4
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 7.9e-21 103.6 78 66.7
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 7.9e-21 103.6 78 66.7
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 7.9e-21 103.6 78 66.7
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 7.9e-21 103.6 75 66.7
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 7.9e-21 103.6 75 66.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 65.4
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 1.0e-20 103.2 82 62.2
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 1.0e-20 103.2 75 65.3
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.0e-20 103.2 75 66.7
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.0e-20 103.2 75 66.7
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.0e-20 103.2 78 66.7
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.3e-20 102.8 78 65.4
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.8e-20 102.4 73 67.1
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 1.8e-20 102.4 73 67.1
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 1.8e-20 102.4 73 67.1
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 1.8e-20 102.4 73 67.1
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 1.8e-20 102.4 78 65.4
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 1.8e-20 102.4 75 65.3
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 1.8e-20 102.4 78 65.4
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.8e-20 102.4 78 65.4
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 1.8e-20 102.4 78 65.4
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 2.3e-20 102.1 80 63.8
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 2.3e-20 102.1 75 66.7
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 2.3e-20 102.1 78 65.4
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 2.3e-20 102.1 80 63.8
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 3.0e-20 101.7 78 64.1
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 3.0e-20 101.7 75 64.0
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 3.9e-20 101.3 78 64.1
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 3.9e-20 101.3 78 64.1
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 3.9e-20 101.3 78 64.1
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 3.9e-20 101.3 78 64.1
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 3.9e-20 101.3 78 65.4
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 5.1e-20 100.9 78 65.4
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 5.1e-20 100.9 78 64.1
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 5.1e-20 100.9 78 64.1
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 5.1e-20 100.9 78 65.4
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 5.1e-20 100.9 80 63.8
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 5.1e-20 100.9 78 66.7
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 6.7e-20 100.5 78 64.1
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 6.7e-20 100.5 78 66.7
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 6.7e-20 100.5 78 64.1
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 8.7e-20 100.1 78 64.1
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 8.7e-20 100.1 78 64.1
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 8.7e-20 100.1 78 64.1
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 1.1e-19 99.8 78 65.4
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.1e-19 99.8 75 65.3
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.1e-19 99.8 78 65.4
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 1.1e-19 99.8 78 65.4
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 1.1e-19 99.8 87 56.3
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 1.5e-19 99.4 78 62.8
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.5e-19 99.4 78 62.8
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.5e-19 99.4 78 62.8
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 1.5e-19 99.4 78 62.8
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 1.5e-19 99.4 78 62.8
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 1.9e-19 99.0 78 62.8
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 2.5e-19 98.6 78 62.8
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 2.5e-19 98.6 75 62.7
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 2.5e-19 98.6 80 61.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 2.5e-19 98.6 78 64.1
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 3.3e-19 98.2 75 62.7
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 4.3e-19 97.8 78 64.1
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 5.7e-19 97.4 74 66.2
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 5.7e-19 97.4 78 61.5
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 5.7e-19 97.4 75 61.3
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 5.7e-19 97.4 78 61.5
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 5.7e-19 97.4 78 61.5
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 5.7e-19 97.4 78 61.5
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 7.4e-19 97.1 87 52.9
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 7.4e-19 97.1 75 62.7
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 9.7e-19 96.7 78 60.3
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.3e-18 96.3 78 61.5
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.3e-18 96.3 78 62.8
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.2e-18 95.5 78 59.0
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 2.2e-18 95.5 78 59.0
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 2.2e-18 95.5 78 61.5
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 2.2e-18 95.5 79 58.2
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 8.2e-18 93.6 73 60.3
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 1.4e-17 92.8 84 54.8
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 1.4e-17 92.8 78 59.0
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 1.8e-17 92.4 73 60.3
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 2.4e-17 92.0 78 59.0
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 5.3e-17 90.9 73 58.9
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 9.0e-17 90.1 77 55.8
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 2.6e-16 88.6 78 57.7
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 3.4e-16 88.2 78 56.4
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.3e-07 59.7 48 62.5
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 8.5e-07 57.0 52 57.7


User provided reference genes

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