Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 5.2e-268 927.2 473 100.0
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 8.3e-226 786.9 484 83.7
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 1.2e-115 421.0 410 53.7
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 6.0e-115 418.7 399 53.9
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 2.3e-114 416.8 407 53.8
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 2.3e-114 416.8 396 53.3
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 3.0e-114 416.4 392 55.1
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 5.0e-114 415.6 408 52.0
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 6.6e-114 415.2 400 54.0
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 1.1e-113 414.5 398 53.3
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 1.1e-113 414.5 400 52.8
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 1.5e-113 414.1 446 50.7
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 1.5e-113 414.1 407 52.8
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 1.9e-113 413.7 393 53.7
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 5.6e-113 412.1 400 54.0
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 9.5e-113 411.4 403 51.6
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 1.2e-112 411.0 407 52.8
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 1.2e-112 411.0 402 53.2
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 1.2e-112 411.0 402 50.5
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 2.8e-112 409.8 397 52.9
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 2.8e-112 409.8 398 53.0
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 6.2e-112 408.7 409 53.1
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 6.2e-112 408.7 384 54.7
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.1e-111 407.9 392 52.6
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 1.1e-111 407.9 399 52.4
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 1.4e-111 407.5 404 52.0
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 1.4e-111 407.5 364 55.5
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 1.4e-111 407.5 407 51.8
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 1.8e-111 407.1 398 53.0
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 1.8e-111 407.1 386 54.4
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.8e-111 407.1 406 51.7
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 2.3e-111 406.8 390 55.1
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 3.1e-111 406.4 401 53.1
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 3.1e-111 406.4 401 53.1
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.1e-111 406.4 364 55.8
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 3.1e-111 406.4 364 55.8
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 3.1e-111 406.4 408 51.5
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 4.0e-111 406.0 390 54.4
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 4.0e-111 406.0 367 55.3
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.0e-111 406.0 367 55.3
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 4.0e-111 406.0 415 52.5
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 4.0e-111 406.0 364 55.2
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 5.2e-111 405.6 396 53.5
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 5.2e-111 405.6 399 53.9
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 5.2e-111 405.6 391 54.5
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 5.2e-111 405.6 402 52.0
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 6.8e-111 405.2 365 55.6
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 6.8e-111 405.2 367 55.0
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 6.8e-111 405.2 367 55.3
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 8.9e-111 404.8 392 52.8
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 1.2e-110 404.4 363 55.9
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 1.5e-110 404.1 392 53.6
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 1.5e-110 404.1 400 53.5
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 2.0e-110 403.7 364 55.2
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 3.4e-110 402.9 396 51.8
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 5.8e-110 402.1 397 53.4
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 1.3e-109 401.0 391 53.5
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 1.3e-109 401.0 450 49.3
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 2.2e-109 400.2 365 55.9
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 2.2e-109 400.2 409 52.1
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 2.2e-109 400.2 409 52.1
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 2.9e-109 399.8 389 52.4
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 3.7e-109 399.4 393 51.9
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 3.7e-109 399.4 408 51.2
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 3.7e-109 399.4 408 51.2
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 4.9e-109 399.1 396 52.8
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 6.4e-109 398.7 463 50.3
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 6.4e-109 398.7 404 51.7
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 8.3e-109 398.3 364 54.4
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 1.1e-108 397.9 399 52.4
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 1.4e-108 397.5 396 51.8
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 4.1e-108 396.0 394 53.0
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 4.1e-108 396.0 394 51.5
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 4.1e-108 396.0 461 47.5
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 4.1e-108 396.0 391 52.7
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 7.1e-108 395.2 379 53.3
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 7.1e-108 395.2 391 51.4
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 9.2e-108 394.8 400 53.5
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 1.6e-107 394.0 400 51.8
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 2.7e-107 393.3 400 52.8
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 2.7e-107 393.3 408 51.5
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 3.5e-107 392.9 405 52.1
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 6.0e-107 392.1 393 51.1
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 6.0e-107 392.1 369 55.0
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 7.8e-107 391.7 400 50.5
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 7.8e-107 391.7 419 49.9
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 1.3e-106 391.0 406 51.5
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.5e-105 387.5 407 49.9
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 1.9e-105 387.1 400 51.0
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 1.9e-105 387.1 386 52.6
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 2.5e-105 386.7 389 52.7
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 3.3e-105 386.3 402 50.7
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 9.5e-105 384.8 369 52.8
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 3.6e-104 382.9 367 50.7
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 1.1e-103 381.3 438 47.3
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 1.1e-103 381.3 395 51.9
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 1.4e-103 380.9 410 50.2
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 2.4e-103 380.2 423 48.7
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 3.1e-103 379.8 365 53.7
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 4.0e-103 379.4 399 50.1
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 2.0e-102 377.1 457 47.0
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 2.6e-102 376.7 370 53.0
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 5.8e-102 375.6 378 51.1
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 5.8e-102 375.6 372 51.6
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.7e-101 374.0 326 57.4
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 1.7e-101 374.0 397 50.6
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 2.9e-101 373.2 349 55.6
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 4.9e-101 372.5 391 50.6
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 1.6e-99 367.5 361 52.9
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 6.0e-99 365.5 408 48.5
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 1.1e-95 354.8 336 53.0
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 2.2e-93 347.1 400 48.5
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 9.3e-92 341.7 368 50.8
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 3.9e-90 336.3 391 47.1
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 5.8e-86 322.4 455 42.0
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 2.1e-83 313.9 285 54.4
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 5.8e-78 295.8 402 41.8
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 1.3e-77 294.7 265 53.6
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 6.0e-75 285.8 335 48.1
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 3.0e-74 283.5 406 42.6
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 2.1e-72 277.3 334 43.7
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 4.6e-67 259.6 361 40.2
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 4.6e-67 259.6 292 47.9
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 2.3e-58 230.7 245 45.3
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 1.4e-52 211.5 184 54.9
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 2.7e-51 207.2 407 33.4
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 4.4e-41 173.3 410 32.9
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 3.8e-37 160.2 151 51.0
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 8.6e-13 79.3 106 40.6
Eucgr.C04148 Eucalyptus grandis HOM05D000836 ORTHO05D000709 5.4e-07 60.1 240 25.0
ATR0705G066 Amborella trichopoda HOM05D004669 ORTHO05D005767 4.6e-06 57.0 230 26.1
Pp3c7_9990 Physcomitrium patens HOM05D004669 ORTHO05D005767 4.6e-06 57.0 224 25.4
Mapoly0043s0035 Marchantia polymorpha HOM05D006776 ORTHO05D007603 6.0e-06 56.6 147 27.9


User provided reference genes

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