Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 6.9e-174 614.0 335 100.0
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 5.7e-11 72.8 217 32.3
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 2.6e-08 63.9 187 31.6
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.5e-08 63.2 63 50.8
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 5.9e-08 62.8 180 30.6
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 7.7e-08 62.4 65 46.2
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.3e-07 61.6 62 50.0
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.9e-07 60.5 226 27.9
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 2.9e-07 60.5 61 49.2
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 2.9e-07 60.5 61 49.2
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 3.8e-07 60.1 65 46.2
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.8e-07 60.1 61 52.5
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 3.8e-07 60.1 65 46.2
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 3.8e-07 60.1 144 31.9
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 3.8e-07 60.1 226 27.9
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 6.5e-07 59.3 64 45.3
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 6.5e-07 59.3 64 45.3
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 8.5e-07 58.9 166 30.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 8.5e-07 58.9 71 43.7
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 8.5e-07 58.9 196 28.1
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.1e-06 58.5 110 35.5
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.1e-06 58.5 96 35.4
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.4e-06 58.2 66 45.5
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.4e-06 58.2 64 43.8
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.9e-06 57.8 65 44.6
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 1.9e-06 57.8 63 44.4
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 1.9e-06 57.8 67 43.3
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 2.5e-06 57.4 65 43.1
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 2.5e-06 57.4 65 43.1
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 2.5e-06 57.4 62 46.8
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.5e-06 57.4 151 31.8
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 2.5e-06 57.4 65 43.1
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 3.2e-06 57.0 58 48.3
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 3.2e-06 57.0 67 41.8
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.2e-06 56.6 202 27.7
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 4.2e-06 56.6 54 51.9
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 4.2e-06 56.6 87 36.8
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 5.5e-06 56.2 90 37.8
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 5.5e-06 56.2 68 41.2
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 5.5e-06 56.2 188 27.7
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 7.2e-06 55.8 90 40.0
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 7.2e-06 55.8 82 36.6
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 7.2e-06 55.8 208 28.8
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 9.4e-06 55.5 87 37.9
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 9.4e-06 55.5 59 47.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 9.4e-06 55.5 56 48.2


User provided reference genes

Program Settings