Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 4.2e-231 804.3 397 100.0
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.1e-82 311.2 391 42.2
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 6.8e-80 302.0 390 38.5
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.4e-79 299.7 382 40.1
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.7e-75 287.3 382 40.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.8e-72 277.3 386 39.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 6.8e-72 275.4 388 36.3
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.5e-71 274.2 386 37.3
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.0e-71 273.9 388 36.1
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.4e-71 273.1 388 35.8
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 7.6e-71 271.9 386 36.8
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.2e-70 270.4 391 36.8
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.8e-70 269.6 390 36.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 4.9e-70 269.2 389 35.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 1.9e-69 267.3 384 37.2
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.4e-69 265.8 388 36.9
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 5.4e-69 265.8 386 36.3
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 7.1e-69 265.4 390 36.2
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 7.1e-69 265.4 390 36.2
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 7.1e-69 265.4 386 37.8
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 3.5e-68 263.1 390 36.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.0e-67 261.5 386 36.0
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.0e-67 261.5 390 36.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.3e-67 261.2 391 35.5
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.3e-67 260.4 386 36.0
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 5.1e-67 259.2 390 35.6
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 5.1e-67 259.2 387 36.2
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 5.1e-67 259.2 396 35.4
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 6.6e-67 258.8 384 35.7
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.5e-66 256.9 392 34.4
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 2.5e-66 256.9 387 36.2
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 5.6e-66 255.8 391 35.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 7.3e-66 255.4 394 36.3
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.6e-65 254.2 396 37.6
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.8e-65 253.4 384 36.7
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 3.6e-65 253.1 386 36.3
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 6.2e-65 252.3 392 35.2
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 6.2e-65 252.3 393 37.4
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 3.1e-64 250.0 387 35.7
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 6.9e-64 248.8 388 34.3
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 6.9e-64 248.8 392 36.0
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 9.0e-64 248.4 387 35.7
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 9.0e-64 248.4 387 34.9
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 9.0e-64 248.4 354 37.3
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.0e-63 247.3 393 34.9
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.6e-63 246.9 381 36.5
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 3.4e-63 246.5 386 35.0
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 4.4e-63 246.1 381 36.5
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.4e-63 246.1 395 35.2
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 5.8e-63 245.7 405 33.3
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 7.6e-63 245.4 395 34.4
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 9.9e-63 245.0 393 36.1
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.3e-62 244.6 398 36.7
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.3e-62 244.6 391 34.0
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.7e-62 244.2 401 33.9
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 2.2e-62 243.8 390 34.9
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 3.8e-62 243.0 394 33.8
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.9e-62 242.7 393 35.1
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.9e-62 242.7 391 34.8
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 6.4e-62 242.3 394 34.0
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 6.4e-62 242.3 393 34.6
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 8.4e-62 241.9 392 34.7
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 8.4e-62 241.9 391 34.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 8.4e-62 241.9 390 34.4
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.4e-61 241.1 387 34.4
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.9e-61 240.7 369 35.8
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.9e-61 240.7 391 34.5
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.4e-61 240.4 394 34.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 2.4e-61 240.4 391 34.5
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 4.2e-61 239.6 369 34.1
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 4.2e-61 239.6 394 34.3
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 7.1e-61 238.8 387 33.3
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 9.3e-61 238.4 393 33.6
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 9.3e-61 238.4 391 34.0
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 1.2e-60 238.0 394 34.8
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 2.7e-60 236.9 397 34.0
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 6.0e-60 235.7 395 34.2
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 6.0e-60 235.7 395 34.2
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.7e-59 234.2 393 35.1
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 3.9e-59 233.0 433 31.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 3.9e-59 233.0 393 34.4
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 3.9e-59 233.0 373 36.2
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 5.1e-59 232.6 391 32.2
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.6e-59 232.3 388 31.7
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.5e-58 231.1 390 33.3
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 3.3e-58 229.9 386 32.9
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 8.1e-57 225.3 390 31.3
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 4.0e-56 223.0 391 33.2
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.4e-55 219.9 393 34.9
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.8e-55 219.2 393 34.9
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.9e-54 216.9 343 35.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 6.4e-54 215.7 387 32.6
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.4e-54 215.3 396 34.1
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.4e-53 213.8 387 32.6
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 4.2e-53 213.0 393 32.3
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 6.0e-52 209.1 373 33.8
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 2.3e-51 207.2 391 31.7
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 8.7e-51 205.3 422 30.3
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.0e-48 196.4 343 32.9
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 6.9e-48 195.7 397 31.2
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.9e-46 189.5 404 30.4
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.1e-45 188.3 294 34.4
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 2.5e-45 187.2 315 32.7
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 6.0e-44 182.6 269 35.3
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.3e-43 180.6 322 32.0
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 7.4e-42 175.6 308 32.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.0e-38 162.9 386 29.3
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 2.5e-37 160.6 289 31.8
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 2.1e-36 157.5 293 32.4
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 2.7e-36 157.1 299 30.8
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 5.1e-35 152.9 408 28.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 5.1e-35 152.9 231 35.1
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 4.8e-33 146.4 353 27.2
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 4.5e-31 139.8 230 34.8
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.9e-29 134.4 176 38.1
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.5e-26 124.8 165 33.9
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 4.7e-20 103.2 141 39.0
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.5e-15 87.0 188 30.9
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.2e-14 84.3 112 39.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.9e-13 81.3 95 44.2
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.4e-11 75.1 117 35.0


User provided reference genes

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