Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.1e-168 596.7 311 100.0
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 4.0e-144 515.0 311 84.9
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 6.2e-44 182.2 214 42.1
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 2.0e-42 177.2 218 43.1
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 5.8e-42 175.6 218 42.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.4e-40 171.0 217 40.1
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 1.9e-40 170.6 218 41.3
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.9e-40 170.6 214 40.2
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.4e-40 170.2 217 39.6
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 5.4e-40 169.1 217 41.5
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 7.1e-40 168.7 217 39.6
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 9.2e-40 168.3 213 40.8
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 2.1e-39 167.2 217 39.2
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.1e-39 167.2 217 38.7
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.5e-39 166.4 216 39.4
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 4.6e-39 166.0 217 39.2
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 6.0e-39 165.6 217 39.2
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 6.0e-39 165.6 217 39.6
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 7.8e-39 165.2 217 38.7
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 1.3e-38 164.5 216 39.4
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 5.1e-38 162.5 263 35.4
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 5.1e-38 162.5 226 37.6
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 5.1e-38 162.5 219 38.4
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 8.6e-38 161.8 217 36.4
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.9e-37 160.6 219 37.9
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.5e-37 160.2 217 36.4
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.5e-37 160.2 216 37.0
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 3.3e-37 159.8 229 36.2
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 3.3e-37 159.8 218 36.2
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 3.3e-37 159.8 217 37.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 4.3e-37 159.5 225 36.9
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 4.3e-37 159.5 216 37.0
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 5.6e-37 159.1 231 35.5
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 7.3e-37 158.7 230 36.5
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 7.3e-37 158.7 228 37.7
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 9.6e-37 158.3 229 37.6
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.2e-36 157.9 220 38.6
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.2e-36 157.9 216 37.5
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.6e-36 157.5 217 38.7
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.6e-36 157.5 217 37.8
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 1.6e-36 157.5 218 35.3
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 2.8e-36 156.8 235 37.0
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.8e-36 156.8 231 35.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 2.8e-36 156.8 229 36.7
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 3.6e-36 156.4 225 36.4
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 3.6e-36 156.4 226 35.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 3.6e-36 156.4 228 36.4
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 3.6e-36 156.4 216 37.5
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 4.7e-36 156.0 216 35.6
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 6.2e-36 155.6 215 37.7
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 6.2e-36 155.6 214 39.3
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 6.2e-36 155.6 214 37.9
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 1.8e-35 154.1 218 34.9
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.8e-35 154.1 217 37.3
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 1.8e-35 154.1 229 36.2
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 3.1e-35 153.3 202 40.1
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 3.1e-35 153.3 229 34.9
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 5.2e-35 152.5 218 34.9
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 6.8e-35 152.1 218 34.9
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 6.8e-35 152.1 219 35.2
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 6.8e-35 152.1 213 38.0
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 6.8e-35 152.1 217 35.9
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 8.9e-35 151.8 216 37.5
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 8.9e-35 151.8 227 36.1
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 8.9e-35 151.8 227 34.8
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.2e-34 151.4 226 35.4
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.2e-34 151.4 217 35.9
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 1.5e-34 151.0 218 35.8
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 1.5e-34 151.0 217 37.3
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.5e-34 151.0 227 35.7
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.5e-34 151.0 218 36.2
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 2.6e-34 150.2 227 35.7
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 2.6e-34 150.2 218 35.8
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 4.4e-34 149.4 220 34.1
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 4.4e-34 149.4 218 37.6
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 4.4e-34 149.4 225 34.7
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 5.8e-34 149.1 235 33.2
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 7.6e-34 148.7 218 35.8
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 7.6e-34 148.7 218 35.8
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 7.6e-34 148.7 227 34.8
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 9.9e-34 148.3 218 34.9
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 9.9e-34 148.3 218 33.9
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 1.3e-33 147.9 226 34.1
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 1.7e-33 147.5 217 34.6
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 1.7e-33 147.5 216 34.7
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.7e-33 147.5 215 35.3
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 3.8e-33 146.4 217 35.5
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 3.8e-33 146.4 218 35.8
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 4.9e-33 146.0 225 33.3
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 4.9e-33 146.0 229 33.6
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 1.1e-32 144.8 219 35.6
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 1.1e-32 144.8 218 36.2
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 1.1e-32 144.8 221 35.7
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 7.1e-32 142.1 213 33.3
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 9.3e-32 141.7 228 35.5
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.0e-30 138.3 216 33.8
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 1.0e-30 138.3 218 35.3
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.1e-29 134.8 210 33.3
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 4.4e-26 122.9 260 28.5
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 2.9e-25 120.2 218 31.7
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.9e-25 119.4 188 33.5
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 2.4e-24 117.1 270 32.6
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 3.9e-22 109.8 142 44.4
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 1.1e-21 108.2 180 33.3
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.3e-20 104.8 150 34.0
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.3e-20 104.8 138 32.6
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 9.0e-19 98.6 128 33.6
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 1.2e-15 88.2 132 33.3
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 7.9e-15 85.5 141 29.1
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.0e-10 70.9 188 26.6
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.9e-08 64.3 82 45.1
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 3.2e-08 63.5 69 36.2
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 9.3e-08 62.0 77 33.8


User provided reference genes

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