Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g22491 Chara braunii HOM05D047391 ORTHO05D001083 7.3e-249 863.6 491 100.0
PRCOL_00006349 Prasinoderma coloniale HOM05D047391 ORTHO05D001083 6.2e-22 109.8 316 30.1
Pp3s30_250 Physcomitrium patens HOM05D037711 ORTHO05D016913 4.7e-14 83.6 289 26.0
Cre17.g722000 Chlamydomonas reinhardtii HOM05D013059 ORTHO05D014381 8.3e-11 72.8 362 25.7
Hund22238 Selenicereus undatus HOM05D001269 ORTHO05D001083 1.2e-09 68.9 199 28.6
Duzib114G0834 Durio zibethinus HOM05D001269 ORTHO05D001083 7.8e-09 66.2 205 29.8
Potri.008G010600 Populus trichocarpa HOM05D001269 ORTHO05D001083 1.0e-08 65.9 217 29.0
ECA238G4012 Erigeron canadensis HOM05D001269 ORTHO05D001083 1.7e-08 65.1 157 29.3
Duzib106G0227 Durio zibethinus HOM05D001269 ORTHO05D001083 2.3e-08 64.7 205 28.8
Sabra08G0006400 Salix brachista HOM05D001269 ORTHO05D001083 3.9e-08 63.9 173 30.1
Atru.chr12.1100 Acer truncatum HOM05D001269 ORTHO05D001083 5.1e-08 63.5 216 28.2
HanXRQChr04g0115211 Helianthus annuus HOM05D001269 ORTHO05D001083 5.1e-08 63.5 213 26.8
Thecc.10G109500 Theobroma cacao HOM05D001269 ORTHO05D001083 6.6e-08 63.2 205 28.8
Rhsim05G0161800 Rhododendron simsii HOM05D001269 ORTHO05D001083 8.6e-08 62.8 200 29.5
HPP92_019904 Vanilla planifolia HOM05D001269 ORTHO05D001083 8.6e-08 62.8 161 28.6
Atru.chr12.1105 Acer truncatum HOM05D001269 ORTHO05D001083 1.1e-07 62.4 216 27.8
Peaxi162Scf00220g00237 Petunia axillaris HOM05D001269 ORTHO05D001083 1.5e-07 62.0 213 28.6
AagrBONN_evm.TU.Sc2ySwM_228.5798 Anthoceros agrestis HOM05D001269 ORTHO05D001083 1.9e-07 61.6 157 29.3
AagrBONN_evm.TU.Sc2ySwM_228.5802 Anthoceros agrestis HOM05D001269 ORTHO05D001083 1.9e-07 61.6 157 29.3
CANSAT54G2837 Cannabis sativa HOM05D001269 ORTHO05D001083 1.9e-07 61.6 200 26.0
Lalb_Chr19g0132771 Lupinus albus HOM05D001269 ORTHO05D001083 1.9e-07 61.6 165 30.9
Nitab4.5_0002687g0010 Nicotiana tabacum HOM05D001269 ORTHO05D001083 1.9e-07 61.6 196 30.1
Nitab4.5_0005848g0020 Nicotiana tabacum HOM05D001269 ORTHO05D001083 1.9e-07 61.6 196 30.1
AagrBONN_evm.TU.Sc2ySwM_362.162 Anthoceros agrestis HOM05D001269 ORTHO05D001083 2.5e-07 61.2 159 28.3
Lalb_Chr18g0048211 Lupinus albus HOM05D001269 ORTHO05D001083 2.5e-07 61.2 193 28.0
TAR633G2121 Trochodendron aralioides HOM05D001269 ORTHO05D001083 2.5e-07 61.2 203 27.1
Cpa.g.sc125.47 Carica papaya HOM05D001269 ORTHO05D001083 3.3e-07 60.8 168 27.4
Atru.chr12.1097 Acer truncatum HOM05D001269 ORTHO05D001083 4.3e-07 60.5 216 27.3
Ah.04g150000 Amaranthus hybridus HOM05D001269 ORTHO05D001083 4.3e-07 60.5 150 26.7
EL10Ac4g08813 Beta vulgaris HOM05D001269 ORTHO05D001083 4.3e-07 60.5 209 25.4
CSS0034806 Camellia sinensis var. sinensis HOM05D001269 ORTHO05D001083 4.3e-07 60.5 205 28.8
Lalb_Chr19g0132781 Lupinus albus HOM05D001269 ORTHO05D001083 4.3e-07 60.5 151 29.1
MD02G1266900 Malus domestica HOM05D001269 ORTHO05D001083 4.3e-07 60.5 205 27.3
Rhsim05G0161700 Rhododendron simsii HOM05D001269 ORTHO05D001083 4.3e-07 60.5 200 28.5
SMO111G0049 Selaginella moellendorffii HOM05D001269 ORTHO05D001083 4.3e-07 60.5 157 27.4
Ca_18107_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 5.6e-07 60.1 105 35.2
Cc06_g21170 Coffea canephora HOM05D001269 ORTHO05D001083 5.6e-07 60.1 168 26.8
HanXRQChr13g0406241 Helianthus annuus HOM05D001269 ORTHO05D001083 5.6e-07 60.1 200 27.0
Psat4g143720 Pisum sativum HOM05D001269 ORTHO05D001083 5.6e-07 60.1 151 29.1
RcHm_v2.0_Chr1g0330291 Rosa chinensis HOM05D001269 ORTHO05D001083 5.6e-07 60.1 205 27.3
Hma1.2p1_1426F.1_g282890 Hydrangea macrophylla HOM05D001269 ORTHO05D001083 7.3e-07 59.7 200 28.0
MD02G1267000 Malus domestica HOM05D001269 ORTHO05D001083 7.3e-07 59.7 205 26.3
PSO210G4957 Papaver somniferum HOM05D001269 ORTHO05D001083 7.3e-07 59.7 154 28.6
TPR.G6900 Trifolium pratense HOM05D001269 ORTHO05D001083 7.3e-07 59.7 99 34.3
CDE08G1582 Ceratophyllum demersum HOM05D001269 ORTHO05D001083 9.5e-07 59.3 219 25.6
Glyma.13G186600 Glycine max HOM05D001269 ORTHO05D001083 9.5e-07 59.3 163 28.2
Lsat_1_v5_gn_8_117061 Lactuca sativa HOM05D001269 ORTHO05D001083 9.5e-07 59.3 153 29.4
Medtr8g042870 Medicago truncatula HOM05D001269 ORTHO05D001083 9.5e-07 59.3 215 26.5
PGR142G0497 Punica granatum HOM05D001269 ORTHO05D001083 9.5e-07 59.3 205 28.3
QL07p015430 Quercus lobata HOM05D001269 ORTHO05D001083 9.5e-07 59.3 199 26.1
DCAR_024470 Daucus carota HOM05D001269 ORTHO05D001083 1.2e-06 58.9 205 27.3
HanXRQChr04g0115271 Helianthus annuus HOM05D001269 ORTHO05D001083 1.2e-06 58.9 144 29.9
Psat4g143680 Pisum sativum HOM05D001269 ORTHO05D001083 1.2e-06 58.9 208 26.4
TAR623G0745 Trochodendron aralioides HOM05D001269 ORTHO05D001083 1.2e-06 58.9 207 26.6
Cfa010426 Carpinus fangiana HOM05D001269 ORTHO05D001083 1.6e-06 58.5 191 27.2
DCAR_030801 Daucus carota HOM05D001269 ORTHO05D001083 1.6e-06 58.5 194 28.4
Dinv14540 Davidia involucrata HOM05D001269 ORTHO05D001083 1.6e-06 58.5 214 25.7
Lj9A661T33 Lonicera japonica HOM05D001269 ORTHO05D001083 1.6e-06 58.5 200 27.5
Lj9A662T27 Lonicera japonica HOM05D001269 ORTHO05D001083 1.6e-06 58.5 200 27.5
Lalb_Chr19g0132801 Lupinus albus HOM05D001269 ORTHO05D001083 1.6e-06 58.5 111 32.4
PSO210G0637 Papaver somniferum HOM05D001269 ORTHO05D001083 1.6e-06 58.5 155 28.4
ClCG11G013130 Citrullus lanatus HOM05D001269 ORTHO05D001083 2.1e-06 58.2 205 24.9
ECA232G3250 Erigeron canadensis HOM05D001269 ORTHO05D001083 2.1e-06 58.2 147 29.3
Glyma.06G313500 Glycine max HOM05D001269 ORTHO05D001083 2.1e-06 58.2 193 26.9
HanXRQChr09g0258211 Helianthus annuus HOM05D001269 ORTHO05D001083 2.1e-06 58.2 140 28.6
HanXRQChr15g0487261 Helianthus annuus HOM05D001269 ORTHO05D001083 2.1e-06 58.2 199 26.6
Hma1.2p1_1269F.1_g271580 Hydrangea macrophylla HOM05D001269 ORTHO05D001083 2.1e-06 58.2 200 27.5
Lalb_Chr01g0007561 Lupinus albus HOM05D001269 ORTHO05D001083 2.1e-06 58.2 194 28.4
Mapoly0019s0109 Marchantia polymorpha HOM05D001269 ORTHO05D001083 2.1e-06 58.2 148 30.4
Oeu060848.1 Olea europaea HOM05D001269 ORTHO05D001083 2.1e-06 58.2 217 25.8
Phvul.011G189900 Phaseolus vulgaris HOM05D001269 ORTHO05D001083 2.1e-06 58.2 163 28.2
Pp3c25_6140 Physcomitrium patens HOM05D001269 ORTHO05D001083 2.1e-06 58.2 213 24.4
Solyc01g096720.4 Solanum lycopersicum HOM05D001269 ORTHO05D001083 2.1e-06 58.2 196 28.6
SGA_v2.0_scaffold5G02799 Striga asiatica HOM05D001269 ORTHO05D001083 2.1e-06 58.2 218 24.3
unitig_746.g26556 Utricularia gibba HOM05D001269 ORTHO05D001083 2.1e-06 58.2 170 25.3
arahy.Tifrunner.gnm1.ann1.IC07XZ Arachis hypogaea HOM05D001269 ORTHO05D001083 2.8e-06 57.8 205 25.4
Glyma.13G186700 Glycine max HOM05D001269 ORTHO05D001083 2.8e-06 57.8 151 27.2
Peaxi162Scf00153g00416 Petunia axillaris HOM05D001269 ORTHO05D001083 2.8e-06 57.8 199 24.1
TPR.G6892 Trifolium pratense HOM05D001269 ORTHO05D001083 2.8e-06 57.8 149 29.5
VMungo1127G0779 Vigna mungo HOM05D001269 ORTHO05D001083 2.8e-06 57.8 160 27.5
CsaV3_5G029650 Cucumis sativus L. HOM05D001269 ORTHO05D001083 3.6e-06 57.4 205 24.9
Glyma.15G224200 Glycine max HOM05D001269 ORTHO05D001083 3.6e-06 57.4 157 28.0
Gohir.D05G289300 Gossypium hirsutum HOM05D001269 ORTHO05D001083 3.6e-06 57.4 193 28.0
Gorai.009G304400 Gossypium raimondii HOM05D001269 ORTHO05D001083 3.6e-06 57.4 193 28.0
Lalb_Chr19g0132751 Lupinus albus HOM05D001269 ORTHO05D001083 3.6e-06 57.4 111 31.5
MD07G1052100 Malus domestica HOM05D001269 ORTHO05D001083 3.6e-06 57.4 205 27.3
TPR.G6864 Trifolium pratense HOM05D001269 ORTHO05D001083 3.6e-06 57.4 211 24.2
AT5G13740 Arabidopsis thaliana HOM05D001269 ORTHO05D001083 4.7e-06 57.0 205 24.9
EL10Ac3g07377 Beta vulgaris HOM05D001269 ORTHO05D001083 4.7e-06 57.0 139 25.9
BcaC04g19020 Brassica carinata HOM05D001269 ORTHO05D001083 4.7e-06 57.0 160 25.6
C09p62560 Brassica napus HOM05D001269 ORTHO05D001083 4.7e-06 57.0 160 25.6
BolC9t59094H Brassica oleracea HOM05D001269 ORTHO05D001083 4.7e-06 57.0 160 25.6
AUR62020967 Chenopodium quinoa HOM05D001269 ORTHO05D001083 4.7e-06 57.0 99 29.3
COL.COLO4_33893 Corchorus olitorius HOM05D001269 ORTHO05D001083 4.7e-06 57.0 150 28.0
Eucgr.G02629 Eucalyptus grandis HOM05D001269 ORTHO05D001083 4.7e-06 57.0 193 27.5
Glyma.13G186500 Glycine max HOM05D001269 ORTHO05D001083 4.7e-06 57.0 157 28.0
Lj3g0001460 Lotus japonicus HOM05D001269 ORTHO05D001083 4.7e-06 57.0 151 26.5
Medtr8g042770 Medicago truncatula HOM05D001269 ORTHO05D001083 4.7e-06 57.0 151 29.1
Medtr8g042780 Medicago truncatula HOM05D001269 ORTHO05D001083 4.7e-06 57.0 157 26.8
PGR102G1229 Punica granatum HOM05D001269 ORTHO05D001083 4.7e-06 57.0 153 26.1
PGSC0003DMG401003297 Solanum tuberosum HOM05D001269 ORTHO05D001083 4.7e-06 57.0 154 31.2
Ah.04g149560 Amaranthus hybridus HOM05D001269 ORTHO05D001083 6.2e-06 56.6 111 27.0
CAN.G134.36 Capsicum annuum HOM05D001269 ORTHO05D001083 6.2e-06 56.6 133 31.6
CiPaw.09G161400 Carya illinoinensis HOM05D001269 ORTHO05D001083 6.2e-06 56.6 223 24.7
Dinv04331 Davidia involucrata HOM05D001269 ORTHO05D001083 6.2e-06 56.6 205 27.3
FvH4_7g04820 Fragaria vesca HOM05D001269 ORTHO05D001083 6.2e-06 56.6 197 25.9
FAN06G3814 Fragaria x ananassa HOM05D001269 ORTHO05D001083 6.2e-06 56.6 197 25.9
Glyma.06G313600 Glycine max HOM05D001269 ORTHO05D001083 6.2e-06 56.6 211 27.0
Glyma.13G186400 Glycine max HOM05D001269 ORTHO05D001083 6.2e-06 56.6 157 28.0
HanXRQChr09g0258231 Helianthus annuus HOM05D001269 ORTHO05D001083 6.2e-06 56.6 199 25.6
Os12g0133000 Oryza sativa ssp. japonica HOM05D001269 ORTHO05D001083 6.2e-06 56.6 181 30.9
Phvul.011G189600 Phaseolus vulgaris HOM05D001269 ORTHO05D001083 6.2e-06 56.6 160 27.5
SalBow1G7329 Salvia bowleyana HOM05D001269 ORTHO05D001083 6.2e-06 56.6 154 28.6
AL6G24350 Arabidopsis lyrata HOM05D001269 ORTHO05D001083 8.1e-06 56.2 205 24.9
CAN.G959.44 Capsicum annuum HOM05D001269 ORTHO05D001083 8.1e-06 56.2 182 25.8
Cfa022246 Carpinus fangiana HOM05D002008 ORTHO05D002054 8.1e-06 56.2 231 24.7
Ca_19745_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 8.1e-06 56.2 142 28.2
DCAR_030807 Daucus carota HOM05D001269 ORTHO05D001083 8.1e-06 56.2 197 27.4
Lalb_Chr03g0032531 Lupinus albus HOM05D001269 ORTHO05D001083 8.1e-06 56.2 157 26.8
Lalb_Chr19g0132811 Lupinus albus HOM05D001269 ORTHO05D001083 8.1e-06 56.2 158 28.5
Manes.10G069400 Manihot esculenta HOM05D001269 ORTHO05D001083 8.1e-06 56.2 205 24.9
Nitab4.5_0002687g0020 Nicotiana tabacum HOM05D001269 ORTHO05D001083 8.1e-06 56.2 139 28.8
Potri.016G024400 Populus trichocarpa HOM05D001269 ORTHO05D001083 8.1e-06 56.2 199 24.6
SMO137G0303 Selaginella moellendorffii HOM05D001269 ORTHO05D001083 8.1e-06 56.2 157 28.0


User provided reference genes

Program Settings