Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g221 Chara braunii HOM05D007111 ORTHO05D008698 0.0e+00 1541.6 806 100.0
COL.COLO4_19495 Corchorus olitorius HOM05D007111 ORTHO05D008698 1.2e-70 272.3 519 35.1
PSO170G0219 Papaver somniferum HOM05D007111 ORTHO05D008698 2.6e-70 271.2 538 34.6
Hund15777 Selenicereus undatus HOM05D007111 ORTHO05D008698 5.8e-70 270.0 484 36.6
PSO455G0076 Papaver somniferum HOM05D007111 ORTHO05D008698 8.4e-69 266.2 549 34.2
AUR62032551 Chenopodium quinoa HOM05D007111 ORTHO05D008698 1.4e-68 265.4 487 35.7
AUR62031668 Chenopodium quinoa HOM05D007111 ORTHO05D008698 1.9e-68 265.0 505 36.2
Gohir.A13G008600 Gossypium hirsutum HOM05D007111 ORTHO05D008698 9.3e-68 262.7 483 35.4
AagrBONN_evm.TU.Sc2ySwM_362.2785 Anthoceros agrestis HOM05D007111 ORTHO05D008698 1.2e-67 262.3 493 34.3
arahy.Tifrunner.gnm1.ann1.8KS8EB Arachis hypogaea HOM05D007111 ORTHO05D008698 7.9e-67 259.6 499 33.1
TPR.G13956 Trifolium pratense HOM05D007111 ORTHO05D008698 1.8e-66 258.5 517 33.5
Potri.013G092900 Populus trichocarpa HOM05D007111 ORTHO05D008698 2.3e-66 258.1 487 35.3
Sabra13G0079700 Salix brachista HOM05D007111 ORTHO05D008698 2.3e-66 258.1 500 35.4
Thecc.10G187300 Theobroma cacao HOM05D007111 ORTHO05D008698 3.0e-66 257.7 499 34.5
Glyma.06G140200 Glycine max HOM05D007111 ORTHO05D008698 3.9e-66 257.3 522 32.8
Gohir.D13G009300 Gossypium hirsutum HOM05D007111 ORTHO05D008698 3.9e-66 257.3 482 35.3
Gorai.013G010000 Gossypium raimondii HOM05D007111 ORTHO05D008698 3.9e-66 257.3 482 35.3
Eucgr.G03170 Eucalyptus grandis HOM05D007111 ORTHO05D008698 1.1e-65 255.8 511 33.7
Medtr3g093570 Medicago truncatula HOM05D007111 ORTHO05D008698 1.1e-65 255.8 500 33.8
Prupe.2G267200 Prunus persica HOM05D007111 ORTHO05D008698 1.5e-65 255.4 507 33.1
Ciclev10031346m.g Citrus clementina HOM05D007111 ORTHO05D008698 2.5e-65 254.6 491 34.4
QL08p065301 Quercus lobata HOM05D007111 ORTHO05D008698 2.5e-65 254.6 494 33.6
Sc11g0006100 Simmondsia chinensis HOM05D007111 ORTHO05D008698 2.5e-65 254.6 504 34.1
Ca_16848_v3 Cicer arietinum L. HOM05D007111 ORTHO05D008698 3.3e-65 254.2 512 31.6
Ah.10g030620 Amaranthus hybridus HOM05D007111 ORTHO05D008698 4.3e-65 253.8 506 33.8
Pp3c9_26100 Physcomitrium patens HOM05D007111 ORTHO05D008698 4.3e-65 253.8 510 33.5
Cfa001180 Carpinus fangiana HOM05D007111 ORTHO05D008698 5.7e-65 253.4 489 34.6
Cc02_g05040 Coffea canephora HOM05D007111 ORTHO05D008698 1.6e-64 251.9 532 34.0
Duzib114G0721 Durio zibethinus HOM05D007111 ORTHO05D008698 1.6e-64 251.9 531 33.5
arahy.Tifrunner.gnm1.ann1.H2KE0M Arachis hypogaea HOM05D007111 ORTHO05D008698 2.1e-64 251.5 486 32.7
Lalb_Chr08g0239311 Lupinus albus HOM05D007111 ORTHO05D008698 2.1e-64 251.5 489 34.4
Solyc03g095290.3 Solanum lycopersicum HOM05D007111 ORTHO05D008698 2.1e-64 251.5 561 33.5
A05p38400 Brassica napus HOM05D007111 ORTHO05D008698 2.8e-64 251.1 490 34.5
SEGI_08727 Sequoiadendron giganteum HOM05D007111 ORTHO05D008698 2.8e-64 251.1 488 34.2
RcHm_v2.0_Chr1g0372761 Rosa chinensis HOM05D007111 ORTHO05D008698 4.8e-64 250.4 501 33.3
TWI09G0231 Tripterygium wilfordii HOM05D007111 ORTHO05D008698 4.8e-64 250.4 486 34.0
BraA05t22631Z Brassica rapa HOM05D007111 ORTHO05D008698 1.1e-63 249.2 490 34.5
ATR1127G005 Amborella trichopoda HOM05D007111 ORTHO05D008698 1.4e-63 248.8 491 34.6
unitig_748.g7012 Utricularia gibba HOM05D007111 ORTHO05D008698 1.4e-63 248.8 506 34.2
CANSAT56G0317 Cannabis sativa HOM05D007111 ORTHO05D008698 1.8e-63 248.4 495 33.7
FvH4_7g26310 Fragaria vesca HOM05D007111 ORTHO05D008698 1.8e-63 248.4 510 33.3
GSVIVG01032868001 Vitis vinifera HOM05D007111 ORTHO05D008698 1.8e-63 248.4 521 33.4
Rhsim09G0187300 Rhododendron simsii HOM05D007111 ORTHO05D008698 2.4e-63 248.1 484 34.9
CAN.G77.12 Capsicum annuum HOM05D007111 ORTHO05D008698 3.1e-63 247.7 490 35.3
Nitab4.5_0000103g0010 Nicotiana tabacum HOM05D007111 ORTHO05D008698 4.1e-63 247.3 497 35.2
MBI15_g31023_MAGBIO Magnolia biondii HOM05D007111 ORTHO05D008698 5.3e-63 246.9 528 31.8
Sopen03g025300 Solanum pennellii HOM05D007111 ORTHO05D008698 5.3e-63 246.9 558 32.8
Dinv34512 Davidia involucrata HOM05D007111 ORTHO05D008698 6.9e-63 246.5 491 34.4
Phvul.009G041500 Phaseolus vulgaris HOM05D007111 ORTHO05D008698 9.0e-63 246.1 491 33.0
BolC5t34385H Brassica oleracea HOM05D007111 ORTHO05D008698 1.2e-62 245.7 469 34.1
Nn5g26779 Nelumbo nucifera HOM05D007111 ORTHO05D008698 1.2e-62 245.7 511 33.5
CSS0034301 Camellia sinensis var. sinensis HOM05D007111 ORTHO05D008698 2.6e-62 244.6 512 34.4
Sed0018935 Sechium edule HOM05D007111 ORTHO05D008698 2.6e-62 244.6 506 35.0
Lj1A970T56 Lonicera japonica HOM05D007111 ORTHO05D008698 5.9e-62 243.4 501 33.1
Manes.07G141300 Manihot esculenta HOM05D007111 ORTHO05D008698 5.9e-62 243.4 487 34.1
TAR623G1475 Trochodendron aralioides HOM05D007111 ORTHO05D008698 7.6e-62 243.0 484 32.6
C05p57300 Brassica napus HOM05D007111 ORTHO05D008698 1.0e-61 242.7 555 31.4
Migut.F00562 Erythranthe guttata HOM05D007111 ORTHO05D008698 1.0e-61 242.7 522 32.6
PGR142G1265 Punica granatum HOM05D007111 ORTHO05D008698 1.0e-61 242.7 528 32.6
Nitab4.5_0001493g0010 Nicotiana tabacum HOM05D007111 ORTHO05D008698 1.7e-61 241.9 497 34.6
Psat5g070040 Pisum sativum HOM05D007111 ORTHO05D008698 2.9e-61 241.1 501 32.7
Thhalv10020632m.g Eutrema salsugineum HOM05D007111 ORTHO05D008698 3.8e-61 240.7 558 30.8
Peaxi162Scf00073g02025 Petunia axillaris HOM05D007111 ORTHO05D008698 3.8e-61 240.7 490 33.9
Cpa.g.sc361.2 Carica papaya HOM05D007111 ORTHO05D008698 5.0e-61 240.4 507 33.7
THA.LOC104816498 Tarenaya hassleriana HOM05D007111 ORTHO05D008698 5.0e-61 240.4 483 32.3
Oeu001371.1 Olea europaea HOM05D007111 ORTHO05D008698 6.5e-61 240.0 366 38.3
Os12g0118400 Oryza sativa ssp. japonica HOM05D007111 ORTHO05D008698 8.5e-61 239.6 494 32.8
Aa31LG3G3800 Aethionema arabicum HOM05D007111 ORTHO05D008698 1.1e-60 239.2 478 32.6
Mapoly0007s0120 Marchantia polymorpha HOM05D007111 ORTHO05D008698 1.1e-60 239.2 480 32.7
HPP92_019761 Vanilla planifolia HOM05D001050 ORTHO05D008698 1.1e-60 239.2 493 32.0
MELO3C022100.2 Cucumis melo HOM05D007111 ORTHO05D008698 1.4e-60 238.8 504 33.5
SalBow3G2513 Salvia bowleyana HOM05D007111 ORTHO05D008698 1.4e-60 238.8 490 33.5
Lsat_1_v5_gn_9_60440 Lactuca sativa HOM05D007111 ORTHO05D008698 2.5e-60 238.0 484 32.6
EL10Ac2g02692 Beta vulgaris HOM05D007111 ORTHO05D008698 4.2e-60 237.3 514 31.9
AT3G10840 Arabidopsis thaliana HOM05D007111 ORTHO05D008698 5.5e-60 236.9 361 38.8
Sp3g09160 Schrenkiella parvula HOM05D007111 ORTHO05D008698 5.5e-60 236.9 381 36.7
CARHR085410 Cardamine hirsuta HOM05D007111 ORTHO05D008698 1.2e-59 235.7 368 38.0
Lj1g0009466 Lotus japonicus HOM05D007111 ORTHO05D008698 1.6e-59 235.3 488 32.0
vmacro09946 Vaccinium macrocarpon HOM05D007111 ORTHO05D008698 1.6e-59 235.3 520 32.3
Aqoxy4G03314 Aquilegia oxysepala HOM05D007111 ORTHO05D008698 2.1e-59 235.0 482 32.8
AL3G22360 Arabidopsis lyrata HOM05D007111 ORTHO05D008698 2.1e-59 235.0 376 37.5
CsaV3_5G039230 Cucumis sativus L. HOM05D007111 ORTHO05D008698 2.7e-59 234.6 473 34.2
FAN01G1610 Fragaria x ananassa HOM05D007111 ORTHO05D008698 7.9e-59 233.0 538 31.6
Carub.0003s1008 Capsella rubella HOM05D007111 ORTHO05D008698 1.0e-58 232.6 359 37.3
DCAR_009466 Daucus carota HOM05D007111 ORTHO05D008698 1.3e-58 232.3 544 31.2
ClCG11G005480 Citrullus lanatus HOM05D007111 ORTHO05D008698 2.3e-58 231.5 514 33.3
FAN06G3859 Fragaria x ananassa HOM05D007111 ORTHO05D008698 1.5e-57 228.8 531 31.6
Cc02_g04850 Coffea canephora HOM05D007111 ORTHO05D008698 4.3e-57 227.3 533 32.3
SGA_v2.0_scaffold44G16613 Striga asiatica HOM05D007111 ORTHO05D008698 4.3e-57 227.3 508 30.9
FAN10G2056 Fragaria x ananassa HOM05D007111 ORTHO05D008698 5.7e-57 226.9 531 31.6
Atru.chr12.220 Acer truncatum HOM05D007111 ORTHO05D008698 1.3e-56 225.7 504 31.9
ECA232G2945 Erigeron canadensis HOM05D002443 ORTHO05D002674 2.8e-56 224.6 503 31.8
HPP92_019044 Vanilla planifolia HOM05D007111 ORTHO05D008698 1.1e-55 222.6 486 32.9
VMungo1309G0640 Vigna mungo HOM05D007111 ORTHO05D008698 1.4e-55 222.2 516 32.4
arahy.Tifrunner.gnm1.ann1.GU1K3S Arachis hypogaea HOM05D007111 ORTHO05D008698 9.0e-55 219.5 493 30.6
Haze_17381 Corylus avellana HOM05D007111 ORTHO05D008698 1.0e-53 216.1 548 30.8
arahy.Tifrunner.gnm1.ann1.FPM1PX Arachis hypogaea HOM05D007111 ORTHO05D008698 2.2e-53 214.9 367 35.4
Actinidia01017 Actinidia chinensis HOM05D007111 ORTHO05D008698 1.4e-52 212.2 489 31.3
CDE06G1989 Ceratophyllum demersum HOM05D007111 ORTHO05D008698 7.2e-52 209.9 481 31.6
HanXRQChr09g0252411 Helianthus annuus HOM05D007111 ORTHO05D008698 6.1e-51 206.8 486 30.9
MD07G1238400 Malus domestica HOM05D007111 ORTHO05D008698 1.0e-50 206.1 350 36.3
SMO361G0418 Selaginella moellendorffii HOM05D007111 ORTHO05D008698 1.2e-46 192.6 473 27.7
FAN03G3512 Fragaria x ananassa HOM05D007111 ORTHO05D008698 5.3e-39 167.2 397 30.0
Zm00001eb284330 Zea mays HOM05D007111 ORTHO05D008698 4.8e-32 144.1 268 35.4
SMO172G0187 Selaginella moellendorffii HOM05D001629 ORTHO05D003842 1.9e-20 105.5 464 23.7
Pp3c27_6880 Physcomitrium patens HOM05D001629 ORTHO05D003842 3.0e-18 98.2 524 23.3
THA.LOC104815542 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 1.2e-17 96.3 508 24.0
Pp3c16_15720 Physcomitrium patens HOM05D001629 ORTHO05D003842 8.3e-16 90.1 504 23.0
AL2G41220 Arabidopsis lyrata HOM05D001629 ORTHO05D003842 1.8e-15 89.0 515 23.3
SEGI_32935 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 5.4e-15 87.4 359 24.0
Pp3c5_1730 Physcomitrium patens HOM05D001629 ORTHO05D003842 9.2e-15 86.7 504 23.0
THA.LOC104808220 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 1.2e-14 86.3 700 22.4
AL1G27610 Arabidopsis lyrata HOM05D001629 ORTHO05D003842 4.5e-14 84.3 512 22.1
SMO364G0686 Selaginella moellendorffii HOM05D001629 ORTHO05D003842 4.5e-14 84.3 373 24.4
Aa31LG4G560 Aethionema arabicum HOM05D001629 ORTHO05D003842 1.0e-13 83.2 506 23.1
Cre01.g039400 Chlamydomonas reinhardtii HOM05D001629 ORTHO05D003842 1.0e-13 83.2 156 32.7
AT1G80280 Arabidopsis thaliana HOM05D001629 ORTHO05D003842 1.3e-13 82.8 390 24.1
CBR_g40151 Chara braunii HOM05D001629 ORTHO05D003842 6.6e-13 80.5 522 21.3
AT1G15490 Arabidopsis thaliana HOM05D001629 ORTHO05D003842 1.5e-12 79.3 507 23.3
Os11g0119100 Oryza sativa ssp. japonica HOM05D007111 ORTHO05D008698 2.5e-12 78.6 168 29.8
PGR102G2868 Punica granatum HOM05D001629 ORTHO05D003842 4.3e-12 77.8 552 22.3
Peaxi162Scf00015g00523 Petunia axillaris HOM05D001629 ORTHO05D003842 7.3e-12 77.0 516 22.5
Sp1g13850 Schrenkiella parvula HOM05D001629 ORTHO05D003842 7.3e-12 77.0 126 33.3
A06p11550 Brassica napus HOM05D001629 ORTHO05D003842 1.6e-11 75.9 507 23.3
BraA06t24329Z Brassica rapa HOM05D001629 ORTHO05D003842 2.8e-11 75.1 504 22.8
Cre09.g407300 Chlamydomonas reinhardtii HOM05D001629 ORTHO05D008698 3.6e-11 74.7 515 22.3
Psat7g254800 Pisum sativum HOM05D001629 ORTHO05D003842 4.7e-11 74.3 539 22.6
CANSAT56G2113 Cannabis sativa HOM05D001629 ORTHO05D003842 1.0e-10 73.2 504 22.6
Manes.04G119000 Manihot esculenta HOM05D001629 ORTHO05D003842 1.0e-10 73.2 364 23.1
Pp3c6_29370 Physcomitrium patens HOM05D001629 ORTHO05D003842 1.4e-10 72.8 491 23.0
Pp3c6_29375 Physcomitrium patens HOM05D001629 ORTHO05D003842 1.4e-10 72.8 491 23.0
BcaB05g25283 Brassica carinata HOM05D001629 ORTHO05D003842 1.8e-10 72.4 667 22.6
C05p13680 Brassica napus HOM05D001629 ORTHO05D003842 1.8e-10 72.4 126 32.5
Psat5g208160 Pisum sativum HOM05D007111 ORTHO05D008698 1.8e-10 72.4 140 30.0
Potri.003G059400 Populus trichocarpa HOM05D001629 ORTHO05D003842 1.8e-10 72.4 372 22.8
arahy.Tifrunner.gnm1.ann1.62DI5E Arachis hypogaea HOM05D001629 ORTHO05D003842 2.3e-10 72.0 562 23.0
arahy.Tifrunner.gnm1.ann1.I8612F Arachis hypogaea HOM05D001629 ORTHO05D003842 2.3e-10 72.0 562 23.0
BcaC05g25626 Brassica carinata HOM05D001629 ORTHO05D003842 2.3e-10 72.0 126 32.5
BolC5t30105H Brassica oleracea HOM05D001629 ORTHO05D003842 2.3e-10 72.0 126 32.5
A06p01650 Brassica napus HOM05D001629 ORTHO05D003842 3.0e-10 71.6 496 21.8
Lalb_Chr14g0373601 Lupinus albus HOM05D001629 ORTHO05D003842 4.0e-10 71.2 547 23.2
Haze_16500 Corylus avellana HOM05D001629 ORTHO05D003842 6.8e-10 70.5 384 23.2
Rhsim08G0217400 Rhododendron simsii HOM05D001629 ORTHO05D003842 8.9e-10 70.1 514 23.7
THA.LOC104812487 Tarenaya hassleriana HOM05D001629 ORTHO05D003842 1.2e-09 69.7 670 23.0
Sp1g39320 Schrenkiella parvula HOM05D001629 ORTHO05D003842 1.5e-09 69.3 492 21.3
Nitab4.5_0000410g0370 Nicotiana tabacum HOM05D001629 ORTHO05D003842 2.0e-09 68.9 241 28.6
Potri.001G174900 Populus trichocarpa HOM05D001629 ORTHO05D003842 3.4e-09 68.2 373 22.0
Aa31LG10G2290 Aethionema arabicum HOM05D001629 ORTHO05D003842 4.4e-09 67.8 115 31.3
TAR626G1732 Trochodendron aralioides HOM05D001629 ORTHO05D003842 5.7e-09 67.4 378 22.8
Ca_07176_v3 Cicer arietinum L. HOM05D001629 ORTHO05D003842 7.5e-09 67.0 545 21.5
Oeu015230.1 Olea europaea HOM05D001629 ORTHO05D003842 1.3e-08 66.2 125 30.4
Oeu020518.1 Olea europaea HOM05D001629 ORTHO05D003842 1.3e-08 66.2 652 23.2
Sabra03G0034000 Salix brachista HOM05D001629 ORTHO05D003842 1.3e-08 66.2 379 22.7
PSO017G4027 Papaver somniferum HOM05D001629 ORTHO05D003842 1.7e-08 65.9 528 23.5
PSO170G0320 Papaver somniferum HOM05D001629 ORTHO05D003842 1.7e-08 65.9 525 23.6
VMungo0331G0430 Vigna mungo HOM05D001629 ORTHO05D003842 1.7e-08 65.9 120 30.0
Atru.chr1.3158 Acer truncatum HOM05D001629 ORTHO05D003842 2.2e-08 65.5 674 22.6
Migut.I00812 Erythranthe guttata HOM05D001629 ORTHO05D003842 2.2e-08 65.5 496 21.4
Psat1g163200 Pisum sativum HOM05D000871 ORTHO05D008698 2.2e-08 65.5 84 39.3
BraA06t23383Z Brassica rapa HOM05D001629 ORTHO05D003842 2.9e-08 65.1 480 21.2
Glyma.04G224500 Glycine max HOM05D007111 ORTHO05D008698 2.9e-08 65.1 55 41.8
MCO12G255 Micromonas commoda HOM05D007111 ORTHO05D008698 2.9e-08 65.1 58 46.6
Nitab4.5_0005786g0020 Nicotiana tabacum HOM05D001629 ORTHO05D003842 2.9e-08 65.1 238 28.6
Glyma.13G362400 Glycine max HOM05D001629 ORTHO05D003842 3.7e-08 64.7 368 23.9
Medtr4g011440 Medicago truncatula HOM05D001629 ORTHO05D003842 3.7e-08 64.7 529 21.9
ClCG09G002540 Citrullus lanatus HOM05D001629 ORTHO05D003842 6.4e-08 63.9 387 22.7
SEGI_25932 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 6.4e-08 63.9 140 30.0
TAR383G0187 Trochodendron aralioides HOM05D001629 ORTHO05D003842 6.4e-08 63.9 517 21.1
HPP92_023330 Vanilla planifolia HOM05D001629 ORTHO05D003842 6.4e-08 63.9 372 22.0
SEGI_11078 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 8.3e-08 63.5 140 30.0
Ca_01093_v3 Cicer arietinum L. HOM05D001629 ORTHO05D003842 1.1e-07 63.2 501 21.8
SEGI_03214 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 1.1e-07 63.2 140 30.0
BcaC05g25500 Brassica carinata HOM05D001629 ORTHO05D003842 1.4e-07 62.8 143 28.0
SEGI_07985 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 1.4e-07 62.8 140 30.0
SEGI_29525 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 1.4e-07 62.8 140 30.0
CAN.G438.91 Capsicum annuum HOM05D001629 ORTHO05D003842 9.2e-07 60.1 232 28.4
Pp3c19_14810 Physcomitrium patens HOM05D002734 ORTHO05D003035 1.6e-06 59.3 94 31.9
Solyc03g119990.4 Solanum lycopersicum HOM05D001629 ORTHO05D003842 2.0e-06 58.9 250 27.6
Lalb_Chr22g0351061 Lupinus albus HOM05D001629 ORTHO05D003842 2.7e-06 58.5 528 22.0
PRCOL_00001900 Prasinoderma coloniale HOM05D007111 ORTHO05D008698 4.6e-06 57.8 412 22.8
Nitab4.5_0003512g0010 Nicotiana tabacum HOM05D001629 ORTHO05D003842 7.8e-06 57.0 252 27.4
Peaxi162Scf00207g00740 Petunia axillaris HOM05D001629 ORTHO05D003842 7.8e-06 57.0 255 25.9
Psat1g163240 Pisum sativum HOM05D007111 ORTHO05D008698 7.8e-06 57.0 49 46.9
Sopen06g025170 Solanum pennellii HOM05D001629 ORTHO05D003842 7.8e-06 57.0 233 27.0


User provided reference genes

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