Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 8.4e-176 620.5 385 100.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.7e-80 303.9 234 74.4
CBR_g124 Chara braunii HOM05D000023 ORTHO05D000937 8.2e-30 135.6 81 82.7
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 1.7e-27 127.9 158 45.6
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 3.8e-27 126.7 157 42.7
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 3.8e-27 126.7 138 44.9
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.9e-26 124.4 100 56.0
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 1.9e-26 124.4 144 47.2
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.9e-26 124.4 144 44.4
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.9e-26 124.4 144 47.2
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 1.9e-26 124.4 86 62.8
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.2e-26 123.6 157 43.9
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 4.2e-26 123.2 151 45.7
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 4.2e-26 123.2 85 63.5
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 4.2e-26 123.2 85 63.5
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 4.2e-26 123.2 105 55.2
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 5.5e-26 122.9 136 49.3
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 5.5e-26 122.9 87 59.8
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 5.5e-26 122.9 127 50.4
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 5.5e-26 122.9 142 47.2
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 7.2e-26 122.5 157 42.7
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.2e-26 122.5 149 45.0
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 7.2e-26 122.5 144 46.5
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 9.4e-26 122.1 149 45.0
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.2e-25 121.7 100 55.0
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-25 121.7 87 60.9
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.2e-25 121.7 87 59.8
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.6e-25 121.3 135 48.9
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.1e-25 120.9 87 60.9
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 2.1e-25 120.9 93 59.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.1e-25 120.9 93 55.9
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 2.7e-25 120.6 90 61.1
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 2.7e-25 120.6 91 57.1
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.7e-25 120.6 87 58.6
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.7e-25 120.6 87 58.6
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 3.6e-25 120.2 158 42.4
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 3.6e-25 120.2 87 58.6
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 3.6e-25 120.2 100 53.0
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.6e-25 120.2 144 45.8
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 4.7e-25 119.8 85 61.2
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 6.1e-25 119.4 100 53.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 6.1e-25 119.4 85 60.0
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 8.0e-25 119.0 93 59.1
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 8.0e-25 119.0 93 59.1
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 8.0e-25 119.0 150 45.3
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 8.0e-25 119.0 144 45.8
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 8.0e-25 119.0 87 58.6
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.0e-24 118.6 130 47.7
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.0e-24 118.6 87 58.6
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.0e-24 118.6 153 43.1
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.0e-24 118.6 144 45.8
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.0e-24 118.6 144 45.1
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.0e-24 118.6 88 59.1
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 1.0e-24 118.6 92 56.5
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.4e-24 118.2 87 58.6
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.4e-24 118.2 144 45.1
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.4e-24 118.2 144 45.1
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.8e-24 117.9 87 60.9
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.8e-24 117.9 87 60.9
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 2.3e-24 117.5 144 43.8
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 2.3e-24 117.5 85 61.2
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 3.0e-24 117.1 87 57.5
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 3.0e-24 117.1 77 64.9
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.0e-24 117.1 87 58.6
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 3.0e-24 117.1 144 45.8
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 3.0e-24 117.1 145 44.8
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 3.0e-24 117.1 145 44.1
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 3.0e-24 117.1 134 47.8
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 3.9e-24 116.7 87 59.8
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 3.9e-24 116.7 87 58.6
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 3.9e-24 116.7 136 45.6
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 3.9e-24 116.7 144 43.8
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 3.9e-24 116.7 87 58.6
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.2e-24 116.3 154 43.5
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 5.2e-24 116.3 85 62.4
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 5.2e-24 116.3 144 44.4
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 6.7e-24 115.9 144 43.1
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 6.7e-24 115.9 134 47.8
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 6.7e-24 115.9 77 64.9
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 6.7e-24 115.9 85 60.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 6.7e-24 115.9 87 59.8
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 8.8e-24 115.5 143 44.8
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.1e-23 115.2 87 57.5
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.1e-23 115.2 144 45.1
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.1e-23 115.2 97 52.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.5e-23 114.8 142 45.8
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 2.0e-23 114.4 145 44.8
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 2.0e-23 114.4 77 63.6
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 2.6e-23 114.0 106 50.0
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 3.3e-23 113.6 89 52.8
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 4.4e-23 113.2 87 56.3
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 4.4e-23 113.2 135 43.7
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 5.7e-23 112.8 77 62.3
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.7e-23 112.8 142 43.7
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 9.7e-23 112.1 78 62.8
CBR_g20403 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-23 112.1 88 65.9
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 2.8e-22 110.5 137 44.5
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.8e-22 110.5 96 54.2
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 2.8e-22 110.5 87 55.2
CBR_g41429 Chara braunii HOM05D000023 ORTHO05D001468 3.7e-22 110.2 88 62.5
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.7e-22 110.2 77 61.0
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 3.7e-22 110.2 85 56.5
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 4.8e-22 109.8 135 45.2
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 4.8e-22 109.8 77 61.0
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 6.3e-22 109.4 137 44.5
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 6.3e-22 109.4 135 44.4
CBR_g34681 Chara braunii HOM05D000023 ORTHO05D000937 6.3e-22 109.4 81 65.4
CBR_g18658 Chara braunii HOM05D000019 ORTHO05D000048 8.2e-22 109.0 105 56.2
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.1e-21 108.6 91 53.8
CBR_g39935 Chara braunii HOM05D002830 ORTHO05D002258 2.4e-21 107.5 74 71.6
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.1e-21 106.7 145 42.8
CBR_g18635 Chara braunii HOM05D000023 ORTHO05D000937 5.3e-21 106.3 81 64.2
CBR_g51085 Chara braunii HOM05D000019 ORTHO05D000937 1.6e-20 104.8 78 66.7
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.0e-20 104.4 79 58.2
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 2.9e-19 100.5 87 50.6
CBR_g6669 Chara braunii HOM05D000023 ORTHO05D000014 6.5e-19 99.4 78 64.1
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.1e-18 98.6 154 39.0
CBR_g26408 Chara braunii HOM05D000505 ORTHO05D001303 1.1e-18 98.6 92 58.7
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.2e-16 89.7 55 70.9
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 6.7e-16 89.4 69 56.5
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 8.8e-16 89.0 166 34.3
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 4.4e-15 86.7 85 45.9
CBR_g21786 Chara braunii HOM05D000023 ORTHO05D000014 8.2e-14 82.4 90 48.9
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.1e-13 82.0 103 44.7
CBR_g52310 Chara braunii HOM05D000023 ORTHO05D000937 1.4e-13 81.6 68 60.3
CBR_g16091 Chara braunii HOM05D000023 ORTHO05D000937 1.8e-13 81.3 76 55.3
CBR_g18900 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-13 81.3 113 43.4
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 1.8e-13 81.3 60 60.0
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 2.4e-13 80.9 134 33.6
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 4.1e-13 80.1 144 37.5
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 4.1e-13 80.1 53 62.3
CBR_g31056 Chara braunii HOM05D000023 ORTHO05D000937 5.3e-13 79.7 55 69.1
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.2e-12 78.6 92 45.7
CBR_g27789 Chara braunii HOM05D000019 ORTHO05D000353 2.7e-12 77.4 80 50.0
CBR_g38297 Chara braunii HOM05D000023 ORTHO05D000937 2.7e-12 77.4 71 56.3
CBR_g51274 Chara braunii HOM05D000023 ORTHO05D000937 2.7e-12 77.4 71 54.9
CBR_g27882 Chara braunii HOM05D000023 ORTHO05D000937 3.5e-12 77.0 78 51.3
CBR_g54807 Chara braunii HOM05D000023 ORTHO05D000937 5.9e-12 76.3 126 39.7
CBR_g46281 Chara braunii HOM05D000023 ORTHO05D000937 7.7e-12 75.9 107 44.9
CBR_g49153 Chara braunii HOM05D000023 ORTHO05D000014 1.3e-11 75.1 63 58.7
CBR_g19429 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-10 71.6 68 54.4
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.2e-10 70.5 49 59.2
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 7.2e-10 69.3 60 46.7
CBR_g55212 Chara braunii HOM05D000023 ORTHO05D000014 1.2e-09 68.6 59 57.6
CBR_g50171 Chara braunii HOM05D000023 ORTHO05D000014 1.4e-08 65.1 68 50.0
CBR_g12932 Chara braunii HOM05D000023 ORTHO05D000937 8.8e-08 62.4 113 35.4
CBR_g26102 Chara braunii HOM05D000023 ORTHO05D000937 1.2e-07 62.0 68 48.5
CBR_g5642 Chara braunii HOM05D000023 ORTHO05D000937 2.0e-07 61.2 87 43.7
CBR_g28638 Chara braunii HOM05D000023 ORTHO05D000937 3.4e-07 60.5 89 40.4
CBR_g24024 Chara braunii HOM05D000023 ORTHO05D000014 4.4e-07 60.1 65 47.7
CBR_g18637 Chara braunii HOM05D000785 ORTHO05D000937 5.7e-07 59.7 86 41.9
CBR_g21073 Chara braunii HOM05D000023 ORTHO05D000014 5.7e-07 59.7 72 47.2
CBR_g41531 Chara braunii HOM05D009985 ORTHO05D000014 7.5e-07 59.3 64 48.4
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 7.5e-07 59.3 42 61.9
CBR_g13001 Chara braunii HOM05D000023 ORTHO05D000014 1.3e-06 58.5 43 62.8
CBR_g37488 Chara braunii HOM05D000023 ORTHO05D000937 1.3e-06 58.5 104 34.6
CBR_g49874 Chara braunii HOM05D000019 ORTHO05D000937 1.7e-06 58.2 53 52.8
CBR_g40940 Chara braunii HOM05D000023 ORTHO05D000937 4.8e-06 56.6 52 51.9
CBR_g51088 Chara braunii HOM05D000023 ORTHO05D000937 4.8e-06 56.6 47 57.4
CBR_g25872 Chara braunii HOM05D000023 ORTHO05D000937 8.3e-06 55.8 72 45.8


User provided reference genes

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