Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 4.5e-185 651.4 392 100.0
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 2.1e-33 147.5 361 29.1
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 2.4e-29 134.0 340 26.8
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 7.3e-26 122.5 348 26.1
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.2e-25 121.7 175 40.6
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 6.2e-25 119.4 355 24.8
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.4e-24 118.2 348 29.0
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 1.8e-24 117.9 348 25.9
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 3.1e-24 117.1 345 28.4
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 4.0e-24 116.7 363 24.5
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 6.9e-24 115.9 339 24.8
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 9.0e-24 115.5 364 24.7
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.5e-23 114.8 163 41.1
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 9.9e-23 112.1 340 25.6
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 8.4e-22 109.0 340 25.6
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 8.4e-22 109.0 350 24.0
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.1e-21 108.6 343 24.5
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.1e-21 108.6 355 23.1
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 1.9e-21 107.8 165 34.5
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 3.2e-21 107.1 338 24.9
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 4.2e-21 106.7 356 25.3
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 4.2e-21 106.7 340 25.9
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 4.2e-21 106.7 345 24.9
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 5.4e-21 106.3 344 24.4
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 5.4e-21 106.3 340 24.4
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 7.1e-21 105.9 340 25.6
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 7.1e-21 105.9 345 23.8
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.2e-20 105.1 156 37.2
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.2e-20 105.1 361 24.9
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 1.2e-20 105.1 347 24.5
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.2e-20 105.1 349 25.2
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.6e-20 104.8 341 23.2
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 1.6e-20 104.8 165 37.0
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 2.1e-20 104.4 171 36.8
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 2.7e-20 104.0 340 24.4
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 2.7e-20 104.0 353 23.8
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 3.5e-20 103.6 156 34.6
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 3.5e-20 103.6 155 35.5
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 4.6e-20 103.2 356 25.3
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 7.8e-20 102.4 340 25.0
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 7.8e-20 102.4 344 23.3
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 7.8e-20 102.4 340 25.0
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.8e-20 102.4 167 35.3
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 7.8e-20 102.4 157 35.7
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.0e-19 102.1 157 37.6
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 1.0e-19 102.1 347 26.5
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 2.3e-19 100.9 173 34.1
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 2.3e-19 100.9 157 35.0
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 3.0e-19 100.5 173 32.9
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 3.0e-19 100.5 341 23.2
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.6e-19 99.4 167 34.7
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 6.6e-19 99.4 145 37.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.1e-18 98.6 163 35.0
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.5e-18 98.2 336 25.0
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 1.9e-18 97.8 155 36.1
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 2.5e-18 97.4 156 35.3
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.5e-18 97.4 146 37.0
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 2.5e-18 97.4 156 36.5
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.3e-18 96.7 165 34.5
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 4.3e-18 96.7 156 36.5
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 5.6e-18 96.3 156 34.6
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 7.3e-18 95.9 345 22.9
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.6e-18 95.5 358 23.5
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.3e-17 95.1 165 35.2
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 2.1e-17 94.4 165 33.3
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 2.8e-17 94.0 345 24.3
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 2.8e-17 94.0 154 33.8
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 3.6e-17 93.6 339 23.3
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 6.2e-17 92.8 339 22.1
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 2.4e-16 90.9 345 25.5
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.0e-16 90.1 167 35.9
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 5.3e-16 89.7 165 32.7
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 6.9e-16 89.4 156 32.7
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 9.0e-16 89.0 343 23.9
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 9.0e-16 89.0 157 33.8
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.0e-15 87.8 158 37.3
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.0e-15 87.8 158 37.3
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 4.5e-15 86.7 343 23.6
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 4.5e-15 86.7 343 23.6
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 4.5e-15 86.7 343 23.6
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 5.8e-15 86.3 341 23.2
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 5.8e-15 86.3 136 33.8
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 7.6e-15 85.9 343 23.6
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 7.6e-15 85.9 343 23.6
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.3e-14 85.1 157 33.1
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.3e-14 85.1 155 32.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.2e-14 84.3 165 32.7
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.9e-14 84.0 346 22.8
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 3.8e-14 83.6 340 23.2
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.9e-13 81.3 341 22.9
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 5.4e-13 79.7 340 23.2
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.7e-12 77.4 343 22.4
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.5e-12 77.0 156 32.7
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.6e-12 76.6 170 32.9
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 7.9e-12 75.9 156 31.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.1e-11 73.2 156 32.7
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 5.1e-11 73.2 220 26.4
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.9e-10 71.2 352 20.5
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 4.3e-10 70.1 145 32.4
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 9.6e-10 68.9 156 31.4
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.4e-08 65.1 119 37.8
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 4.0e-08 63.5 155 26.5
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 5.3e-08 63.2 145 29.7
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.2e-07 62.0 122 35.2
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 1.5e-07 61.6 145 29.0
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 2.0e-07 61.2 128 35.2
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 9.9e-07 58.9 52 46.2
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 2.9e-06 57.4 57 42.1
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 3.8e-06 57.0 55 45.5


User provided reference genes

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