Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 0.0e+00 1702.2 1010 100.0
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 1.5e-30 139.4 535 29.3
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.7e-29 134.8 159 47.8
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 4.6e-24 117.9 157 44.6
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 6.7e-23 114.0 181 40.9
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 8.8e-23 113.6 152 44.7
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 8.8e-23 113.6 174 44.3
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 4.3e-22 111.3 165 41.2
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 5.7e-22 110.9 151 45.0
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 5.7e-22 110.9 159 44.0
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 5.7e-22 110.9 751 28.5
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 5.7e-22 110.9 136 47.1
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 9.7e-22 110.2 165 40.6
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 9.7e-22 110.2 175 41.7
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 9.7e-22 110.2 165 41.8
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.3e-21 109.8 179 40.2
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 3.7e-21 108.2 151 44.4
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 3.7e-21 108.2 151 44.4
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 3.7e-21 108.2 156 43.6
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 3.7e-21 108.2 151 44.4
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 3.7e-21 108.2 151 44.4
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 3.7e-21 108.2 192 38.0
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 6.3e-21 107.5 496 26.2
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 6.3e-21 107.5 166 41.6
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 8.2e-21 107.1 191 40.3
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 8.2e-21 107.1 157 43.3
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.1e-20 106.7 151 43.7
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.4e-20 106.3 137 44.5
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 1.4e-20 106.3 147 44.2
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 1.8e-20 105.9 184 40.2
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 3.1e-20 105.1 136 44.9
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 3.1e-20 105.1 141 41.8
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 3.1e-20 105.1 164 41.5
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 4.1e-20 104.8 175 40.0
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 5.3e-20 104.4 146 44.5
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 6.9e-20 104.0 198 37.9
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 6.9e-20 104.0 137 44.5
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 6.9e-20 104.0 180 41.1
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 6.9e-20 104.0 168 42.3
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.2e-19 103.2 177 38.4
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 1.2e-19 103.2 143 42.0
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.2e-19 103.2 176 38.1
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 1.5e-19 102.8 138 44.9
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 1.5e-19 102.8 144 42.4
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 2.0e-19 102.4 137 43.1
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 2.6e-19 102.1 175 39.4
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 2.6e-19 102.1 159 40.3
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 3.4e-19 101.7 184 37.0
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 4.5e-19 101.3 152 42.8
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 4.5e-19 101.3 172 39.0
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 5.9e-19 100.9 136 43.4
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 5.9e-19 100.9 197 37.1
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 5.9e-19 100.9 502 28.5
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 5.9e-19 100.9 186 39.8
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 7.7e-19 100.5 193 36.3
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 7.7e-19 100.5 197 37.1
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 7.7e-19 100.5 152 40.8
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 7.7e-19 100.5 514 27.8
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 1.0e-18 100.1 193 35.8
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.0e-18 100.1 197 37.1
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 1.0e-18 100.1 179 40.8
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.3e-18 99.8 164 39.0
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.3e-18 99.8 178 38.8
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.2e-18 99.0 134 45.5
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 2.2e-18 99.0 193 35.2
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 2.2e-18 99.0 143 43.4
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.9e-18 98.6 134 43.3
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 3.8e-18 98.2 152 42.1
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 3.8e-18 98.2 178 37.6
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 5.0e-18 97.8 173 41.6
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 6.5e-18 97.4 170 38.8
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 6.5e-18 97.4 163 39.9
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 6.5e-18 97.4 180 36.7
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 8.5e-18 97.1 191 39.3
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.9e-17 95.9 477 27.9
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.9e-17 95.9 477 27.9
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 1.9e-17 95.9 502 27.5
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 2.5e-17 95.5 145 43.4
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 2.5e-17 95.5 139 41.7
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 2.5e-17 95.5 147 42.2
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 3.2e-17 95.1 167 37.1
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 5.5e-17 94.4 513 26.7
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 5.5e-17 94.4 500 27.2
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 5.5e-17 94.4 173 36.4
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 5.5e-17 94.4 176 35.8
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 5.5e-17 94.4 163 38.0
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 7.2e-17 94.0 192 34.9
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 7.2e-17 94.0 500 27.2
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 9.4e-17 93.6 137 41.6
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 9.4e-17 93.6 132 39.4
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 1.2e-16 93.2 143 41.3
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 2.1e-16 92.4 158 38.6
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 3.6e-16 91.7 508 25.6
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 3.6e-16 91.7 198 36.4
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 3.6e-16 91.7 496 27.0
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 6.1e-16 90.9 169 34.9
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 7.9e-16 90.5 211 35.1
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 7.9e-16 90.5 145 39.3
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.4e-15 89.7 171 35.7
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 3.9e-15 88.2 481 27.9
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 5.1e-15 87.8 502 26.1
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 8.8e-15 87.0 136 40.4
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 2.0e-14 85.9 121 43.0
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 2.0e-14 85.9 119 40.3
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.3e-14 85.1 174 37.9
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 2.8e-13 82.0 117 42.7
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 3.7e-13 81.6 497 27.6
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 4.8e-13 81.3 125 41.6
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 9.1e-12 77.0 115 41.7
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 2.9e-10 72.0 98 43.9
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 1.5e-09 69.7 64 54.7
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 1.6e-08 66.2 81 48.1
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 2.1e-08 65.9 504 26.0
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 3.3e-06 58.5 61 47.5


User provided reference genes

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