Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 0.0e+00 1746.1 1029 100.0
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 4.9e-247 858.6 869 54.7
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 6.0e-245 851.7 854 54.7
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 5.1e-236 822.0 865 51.6
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 6.6e-236 821.6 877 52.0
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 4.0e-233 812.4 866 51.2
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 1.5e-232 810.4 854 51.4
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 1.5e-232 810.4 873 50.7
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 4.5e-232 808.9 866 50.8
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 5.8e-232 808.5 854 51.6
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 2.9e-231 806.2 864 50.9
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 4.9e-231 805.4 848 51.8
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 6.4e-231 805.1 872 51.1
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 8.4e-231 804.7 873 50.2
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 1.1e-230 804.3 873 50.9
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.4e-230 803.9 871 50.9
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.9e-230 803.5 864 51.3
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 2.4e-230 803.1 873 49.9
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 4.2e-230 802.4 872 50.8
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.2e-230 802.4 864 51.4
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 5.4e-230 802.0 864 50.9
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 5.4e-230 802.0 866 50.5
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 7.1e-230 801.6 872 50.7
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 7.1e-230 801.6 848 51.5
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 9.3e-230 801.2 848 51.3
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.2e-229 800.8 872 50.3
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 1.6e-229 800.4 873 50.2
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 1.6e-229 800.4 864 50.7
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 2.7e-229 799.7 864 50.5
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 3.5e-229 799.3 864 51.0
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 3.5e-229 799.3 848 51.4
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 6.0e-229 798.5 873 49.7
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 7.9e-229 798.1 872 50.2
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 1.0e-228 797.7 874 50.9
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.3e-228 797.3 865 50.8
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.8e-228 797.0 865 50.8
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.8e-228 797.0 866 50.5
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 3.0e-228 796.2 865 50.6
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 3.9e-228 795.8 865 51.0
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 5.1e-228 795.4 849 51.6
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 6.7e-228 795.0 853 51.2
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 3.3e-227 792.7 865 50.8
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 7.4e-227 791.6 865 50.5
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 7.4e-227 791.6 868 50.7
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 9.6e-227 791.2 881 49.4
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 1.3e-226 790.8 852 50.8
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.1e-226 790.0 865 50.4
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 2.8e-226 789.6 865 51.3
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 2.8e-226 789.6 873 50.1
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 8.1e-226 788.1 853 51.0
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 1.1e-225 787.7 868 50.2
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.4e-225 787.3 872 49.5
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 1.8e-225 786.9 851 51.4
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 5.3e-225 785.4 864 50.1
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 1.5e-224 783.9 848 50.7
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.6e-224 783.1 873 50.3
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 5.8e-224 781.9 864 50.5
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 1.0e-223 781.2 858 49.9
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.7e-223 780.4 873 49.5
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 4.9e-223 778.9 854 50.1
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 4.9e-223 778.9 872 49.8
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 4.9e-223 778.9 876 49.2
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 4.9e-223 778.9 897 49.1
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 4.9e-223 778.9 879 49.1
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 8.4e-223 778.1 873 49.5
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.1e-222 777.7 864 50.0
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.9e-222 776.9 881 50.1
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 1.9e-222 776.9 871 49.3
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 3.2e-222 776.2 873 49.1
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 4.2e-222 775.8 865 49.9
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 7.1e-222 775.0 864 49.7
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 2.7e-221 773.1 864 49.9
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 3.5e-221 772.7 864 49.4
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 6.0e-221 771.9 852 48.9
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 1.0e-220 771.2 864 48.7
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 1.8e-220 770.4 852 50.5
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 8.7e-220 768.1 865 50.4
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 1.5e-219 767.3 864 48.8
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 7.4e-219 765.0 864 48.4
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 2.1e-218 763.5 864 48.4
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 4.8e-218 762.3 864 48.4
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 6.2e-218 761.9 870 48.5
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 6.2e-218 761.9 864 48.3
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 1.2e-216 757.7 864 49.2
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 3.4e-216 756.1 949 47.0
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 1.0e-215 754.6 871 48.7
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 2.9e-215 753.1 864 48.7
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 3.8e-215 752.7 867 48.3
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 9.3e-214 748.0 849 48.8
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 1.3e-210 737.6 872 48.3
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 4.1e-209 732.6 799 51.2
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 9.0e-209 731.5 899 46.9
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 2.6e-208 729.9 871 47.6
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 3.4e-208 729.6 873 47.3
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 4.5e-208 729.2 870 47.2
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 7.7e-208 728.4 816 48.7
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 1.2e-205 721.1 838 48.9
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 8.8e-204 714.9 737 52.2
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 2.5e-203 713.4 927 44.6
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 4.3e-203 712.6 766 50.0
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 1.2e-200 704.5 980 43.2
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 1.7e-199 700.7 899 46.1
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 8.5e-199 698.4 872 46.2
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 1.4e-198 697.6 853 46.9
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 4.2e-198 696.0 864 46.1
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 5.5e-198 695.7 870 45.7
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 2.7e-197 693.3 847 46.3
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 3.7e-194 682.9 869 46.0
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 3.7e-194 682.9 864 45.4
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 2.5e-190 670.2 678 53.2
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 1.2e-189 667.9 864 44.2
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.5e-187 661.0 865 44.7
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 9.7e-187 658.3 873 44.6
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 3.6e-181 639.8 868 44.0
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.7e-178 630.9 666 52.1
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 5.4e-177 625.9 743 47.4
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 5.7e-163 579.3 971 44.5
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 1.3e-162 578.2 685 48.6
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 4.1e-153 546.6 612 48.5
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 5.2e-140 503.1 769 43.2
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 3.2e-137 493.8 621 46.7
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 1.6e-125 454.9 773 39.5
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 4.2e-113 413.7 855 36.3
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 6.9e-108 396.4 423 50.8
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 2.4e-100 371.3 405 51.1
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.0e-99 368.2 332 57.8
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 1.7e-98 365.2 481 45.3
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 2.5e-97 361.3 593 39.0
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 3.3e-86 324.3 476 42.6
Haze_16164 Corylus avellana HOM05D003653 ORTHO05D004249 3.8e-82 310.8 346 48.6
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 2.1e-80 305.1 405 43.5
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.6e-67 262.3 246 55.7
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 1.4e-60 239.2 454 37.4
Nitab4.5_0022446g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 7.7e-59 233.4 236 52.5
Solyc07g017530.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 2.0e-51 208.8 230 47.8
CDE09G1393 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 1.1e-49 203.0 229 48.0
SEGI_20709 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 8.0e-48 196.8 205 51.2
Cfa023740 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.0e-46 192.2 638 24.3
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.5e-41 176.0 219 47.9
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 3.1e-39 168.3 172 52.3
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 8.3e-37 160.2 201 43.8
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.0e-35 155.6 255 40.4
Nitab4.5_0000055g0040 Nicotiana tabacum HOM05D003653 ORTHO05D004249 9.5e-33 146.7 201 40.3
ClCG08G005090 Citrullus lanatus HOM05D003653 ORTHO05D004249 2.8e-32 145.2 176 44.9
QL02p096242 Quercus lobata HOM05D003653 ORTHO05D004249 1.2e-30 139.8 176 44.9
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 5.8e-30 137.5 118 61.9
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 5.8e-30 137.5 118 61.9
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 8.3e-29 133.7 118 60.2
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 1.4e-28 132.9 115 60.9
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 9.2e-28 130.2 118 60.2
CAN.G4608.1 Capsicum annuum HOM05D003653 ORTHO05D004249 1.7e-26 125.9 156 44.2
Lsat_1_v5_gn_7_30301 Lactuca sativa HOM05D003653 ORTHO05D004249 2.3e-26 125.6 116 56.0
Haze_06171 Corylus avellana HOM05D003653 ORTHO05D004249 2.1e-24 119.0 167 44.3
SEGI_20750 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.1e-24 119.0 98 58.2
Lsat_1_v5_gn_2_18300 Lactuca sativa HOM05D003653 ORTHO05D004249 9.9e-22 110.2 107 55.1
SEGI_01409 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.1e-20 106.7 92 60.9
Actinidia26999 Actinidia chinensis HOM05D003653 ORTHO05D004249 6.0e-19 100.9 152 42.8
BraA02t06914Z Brassica rapa HOM05D003653 ORTHO05D004249 6.6e-18 97.4 158 36.7
TAR383G0271 Trochodendron aralioides HOM05D003653 ORTHO05D004249 9.6e-17 93.6 113 47.8
CSS0010583 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 8.1e-16 90.5 68 60.3
Gorai.004G136800 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.1e-15 90.1 71 60.6
QL02p096270 Quercus lobata HOM05D003653 ORTHO05D004249 1.4e-15 89.7 79 54.4
SEGI_27322 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.8e-15 89.4 64 65.6
Haze_16166 Corylus avellana HOM05D003653 ORTHO05D004249 3.1e-15 88.6 127 43.3
Gorai.013G153500 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.0e-15 88.2 126 41.3
Gohir.D08G133700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 6.9e-15 87.4 71 59.2
CSS0016569 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 8.9e-15 87.0 64 60.9
Lsat_1_v5_gn_6_63001 Lactuca sativa HOM05D003653 ORTHO05D004249 6.4e-13 80.9 50 76.0
Oeu030621.1 Olea europaea HOM05D003653 ORTHO05D004249 8.4e-13 80.5 132 37.1
CSS0016294 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.6e-11 76.3 78 53.8
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.1e-11 75.9 100 46.0
Haze_19192 Corylus avellana HOM05D003653 ORTHO05D004249 6.0e-11 74.3 128 39.8
MCO01G230 Micromonas commoda HOM05D003653 ORTHO05D004249 3.0e-10 72.0 212 23.6
CSS0022673 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 8.7e-10 70.5 40 70.0
Gohir.D13G136950 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.1e-09 70.1 116 37.9
CAN.G12730.1 Capsicum annuum HOM05D003653 ORTHO05D004249 3.6e-08 65.1 57 57.9
CiPaw.07G188100 Carya illinoinensis HOM05D003653 ORTHO05D004249 4.8e-08 64.7 123 38.2
Medtr8g018610 Medicago truncatula HOM05D003653 ORTHO05D004249 1.8e-07 62.8 52 57.7
CSS0016412 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 4.5e-06 58.2 36 66.7


User provided reference genes

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