Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 6.3e-210 734.2 461 100.0
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 4.3e-33 146.7 176 44.9
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.1e-32 144.4 174 43.1
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 8.0e-32 142.5 185 43.2
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 1.1e-31 142.1 163 44.8
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 1.8e-31 141.4 163 46.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 6.8e-31 139.4 174 43.1
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 8.9e-31 139.0 150 46.0
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 8.9e-31 139.0 193 39.4
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.2e-30 138.7 181 42.0
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.2e-30 138.7 151 45.0
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 2.6e-30 137.5 179 38.5
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 3.4e-30 137.1 160 42.5
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 5.8e-30 136.3 151 45.7
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 7.5e-30 136.0 172 41.9
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 9.8e-30 135.6 171 42.1
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 9.8e-30 135.6 180 40.0
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.7e-29 134.8 179 38.5
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.7e-29 134.8 160 42.5
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.2e-29 134.4 160 41.2
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 2.2e-29 134.4 160 43.8
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 6.4e-29 132.9 160 41.9
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 6.4e-29 132.9 159 41.5
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 6.4e-29 132.9 177 40.7
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 1.1e-28 132.1 176 41.5
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.1e-28 132.1 159 42.1
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.4e-28 131.7 169 43.2
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.4e-28 131.7 176 40.9
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.9e-28 131.3 159 40.9
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.9e-28 131.3 160 40.6
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.9e-28 131.3 164 40.9
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.9e-28 131.3 160 41.2
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 2.4e-28 131.0 167 43.1
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 2.4e-28 131.0 164 42.1
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 3.2e-28 130.6 160 41.2
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 4.1e-28 130.2 151 44.4
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 4.1e-28 130.2 163 41.1
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.4e-28 129.8 160 40.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 5.4e-28 129.8 176 38.6
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 7.0e-28 129.4 160 40.6
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 7.0e-28 129.4 164 42.7
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 9.2e-28 129.0 159 42.1
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 1.2e-27 128.6 160 40.6
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 2.7e-27 127.5 180 37.8
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 2.7e-27 127.5 180 37.8
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 2.7e-27 127.5 185 38.4
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.7e-27 127.5 176 39.2
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.7e-27 127.5 160 41.2
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 6.0e-27 126.3 166 42.2
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 7.8e-27 125.9 159 39.6
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 7.8e-27 125.9 159 39.6
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 7.8e-27 125.9 176 38.1
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.0e-26 125.6 181 38.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-26 125.2 181 38.1
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 1.3e-26 125.2 168 42.9
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.7e-26 124.8 160 41.2
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.7e-26 124.8 180 36.7
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 1.7e-26 124.8 180 37.2
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 2.3e-26 124.4 163 39.3
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 2.3e-26 124.4 160 41.9
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.3e-26 124.4 160 40.6
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 2.3e-26 124.4 152 42.1
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.9e-26 123.6 151 42.4
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 5.0e-26 123.2 159 40.9
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 6.6e-26 122.9 172 39.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 8.6e-26 122.5 160 40.0
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.1e-25 122.1 160 41.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 2.5e-25 120.9 153 43.1
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 9.5e-25 119.0 160 41.2
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.2e-24 118.6 172 37.8
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.2e-24 118.6 172 37.8
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 2.1e-24 117.9 172 36.6
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.8e-24 117.5 171 39.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.7e-24 116.7 217 33.6
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 8.1e-24 115.9 188 35.1
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.4e-23 115.2 160 39.4
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.4e-23 115.2 160 40.0
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.4e-23 115.2 186 36.0
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 1.8e-23 114.8 163 38.0
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.1e-23 114.0 160 40.0
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 2.6e-22 110.9 173 41.6
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.4e-22 110.5 183 34.4
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 4.4e-22 110.2 169 36.1
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.7e-21 108.2 169 35.5
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 7.1e-20 102.8 193 32.6
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.6e-19 101.7 180 34.4
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 4.6e-19 100.1 182 35.7
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 4.6e-19 100.1 103 46.6
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 1.0e-18 99.0 162 36.4
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.5e-17 95.1 177 32.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 5.6e-17 93.2 111 42.3
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 6.2e-16 89.7 161 35.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 3.1e-15 87.4 83 49.4
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 8.4e-13 79.3 173 31.8
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 2.4e-12 77.8 110 39.1
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.1e-11 74.7 93 40.9
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 6.0e-11 73.2 95 36.8
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 1.3e-10 72.0 90 43.3
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.3e-10 72.0 105 35.2
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.8e-07 61.6 122 36.1
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 9.0e-07 59.3 62 43.5
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 4.4e-06 57.0 52 48.1


User provided reference genes

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