Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 1.3e-111 406.4 202 100.0
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 4.3e-62 241.9 180 62.8
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 8.9e-60 234.2 180 60.6
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.2e-59 233.8 179 61.5
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 2.6e-59 232.6 181 57.5
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 2.6e-59 232.6 181 60.2
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.4e-59 232.3 181 56.9
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 3.4e-59 232.3 181 59.7
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 4.4e-59 231.9 180 58.9
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 7.5e-59 231.1 180 60.6
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 7.5e-59 231.1 181 56.9
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 1.3e-58 230.3 180 58.3
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.7e-58 229.9 180 58.9
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.7e-58 229.9 180 58.9
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 1.7e-58 229.9 179 60.9
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 4.9e-58 228.4 181 60.2
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.1e-57 227.3 180 57.8
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 1.1e-57 227.3 179 58.7
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 1.4e-57 226.9 181 58.0
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 1.9e-57 226.5 191 58.6
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 2.4e-57 226.1 180 58.9
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 2.4e-57 226.1 181 57.5
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 2.4e-57 226.1 180 56.7
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 2.4e-57 226.1 186 57.5
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 3.2e-57 225.7 180 57.8
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 4.1e-57 225.3 180 56.1
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 4.1e-57 225.3 180 58.9
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 7.1e-57 224.6 181 58.6
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 7.1e-57 224.6 181 58.6
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 7.1e-57 224.6 189 56.6
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 7.1e-57 224.6 180 58.3
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 9.2e-57 224.2 180 58.3
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 9.2e-57 224.2 180 57.2
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 1.2e-56 223.8 180 58.3
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.6e-56 223.4 191 54.5
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.6e-56 223.4 181 56.9
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.1e-56 223.0 180 56.7
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 2.1e-56 223.0 179 58.1
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 2.7e-56 222.6 180 56.1
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.5e-56 222.2 179 57.0
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 3.5e-56 222.2 181 55.8
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 4.6e-56 221.9 180 57.8
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 4.6e-56 221.9 181 54.1
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 4.6e-56 221.9 180 56.7
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 4.6e-56 221.9 180 55.6
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 6.0e-56 221.5 180 55.6
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 6.0e-56 221.5 180 56.7
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 7.8e-56 221.1 181 54.7
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 7.8e-56 221.1 180 56.7
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 1.0e-55 220.7 180 55.6
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 1.3e-55 220.3 181 58.6
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 1.3e-55 220.3 180 57.2
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 1.3e-55 220.3 180 55.6
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.3e-55 220.3 180 56.7
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 2.3e-55 219.5 184 53.8
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 2.3e-55 219.5 180 56.1
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 3.0e-55 219.2 180 55.6
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 3.0e-55 219.2 180 54.4
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 3.9e-55 218.8 180 53.9
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 3.9e-55 218.8 187 52.9
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 3.9e-55 218.8 181 55.2
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 3.9e-55 218.8 179 57.0
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 3.9e-55 218.8 181 58.0
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 3.9e-55 218.8 181 58.0
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 5.1e-55 218.4 181 54.1
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 5.1e-55 218.4 182 56.6
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 6.6e-55 218.0 180 54.4
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.6e-55 218.0 182 56.0
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 8.6e-55 217.6 181 56.9
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 8.6e-55 217.6 180 55.0
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 8.6e-55 217.6 192 55.7
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 8.6e-55 217.6 181 55.8
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 1.5e-54 216.9 181 55.2
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 1.5e-54 216.9 181 56.9
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 1.5e-54 216.9 181 56.9
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 1.5e-54 216.9 179 55.9
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.5e-54 216.9 182 54.9
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 1.5e-54 216.9 182 57.1
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 1.9e-54 216.5 192 54.7
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 1.9e-54 216.5 180 57.8
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 2.5e-54 216.1 181 56.9
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 3.3e-54 215.7 180 58.3
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 3.3e-54 215.7 181 55.2
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 4.3e-54 215.3 181 52.5
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 5.6e-54 214.9 181 55.2
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 7.3e-54 214.5 182 56.6
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 7.3e-54 214.5 181 56.4
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 9.5e-54 214.2 182 55.5
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 9.5e-54 214.2 180 55.0
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 9.5e-54 214.2 180 55.0
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 6.2e-53 211.5 188 53.2
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 8.1e-53 211.1 180 53.3
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 1.8e-52 209.9 181 54.7
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 2.3e-52 209.5 180 57.8
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 4.0e-52 208.8 180 51.7
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 4.0e-52 208.8 180 56.1
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.2e-51 207.2 196 50.0
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.5e-51 206.8 203 48.3
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 4.4e-51 205.3 182 53.3
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 6.4e-50 201.4 182 50.5
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 9.2e-49 197.6 235 44.7
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 6.0e-48 194.9 181 53.0
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.3e-47 193.0 180 51.7
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.6e-47 191.4 152 58.6
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 8.9e-44 181.0 269 38.3
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 4.4e-43 178.7 218 44.5
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 7.1e-41 171.4 166 51.8
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 6.0e-40 168.3 188 42.6
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.5e-38 162.9 180 46.7
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 1.3e-37 160.6 128 56.2
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 2.1e-37 159.8 151 49.7
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 8.1e-37 157.9 124 58.1
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 3.1e-36 156.0 124 55.6
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 8.4e-34 147.9 196 44.4
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 1.4e-28 130.6 111 57.7
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 2.2e-26 123.2 93 58.1
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 4.9e-18 95.5 88 50.0
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 7.1e-17 91.7 87 48.3
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.5e-14 84.0 67 59.7
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.4e-12 77.4 58 56.9
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.2e-10 70.1 64 54.7
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.5e-09 65.5 57 56.1
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 6.7e-07 58.5 32 71.9
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.9e-06 57.0 31 77.4
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 9.7e-06 54.7 32 68.8


User provided reference genes

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