Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g20042 Chara braunii HOM05D003228 ORTHO05D003698 0.0e+00 1242.3 704 100.0
CBR_g54219 Chara braunii HOM05D003228 ORTHO05D003698 1.2e-90 338.6 539 44.2
CBR_g48626 Chara braunii HOM05D003228 ORTHO05D003698 6.0e-79 299.7 262 61.8
CBR_g52600 Chara braunii HOM05D003228 ORTHO05D003698 2.3e-62 244.6 458 32.3
CBR_g52595 Chara braunii HOM05D007240 ORTHO05D003698 4.8e-52 210.3 423 32.2
CBR_g37491 Chara braunii HOM05D003228 ORTHO05D003698 1.5e-50 205.3 517 28.0
CBR_g22362 Chara braunii HOM05D003228 ORTHO05D003698 2.6e-42 177.9 455 29.0
SMO340G0074 Selaginella moellendorffii HOM05D003228 ORTHO05D003698 2.7e-15 88.2 159 32.1
unitig_52.g17708 Utricularia gibba HOM05D003228 ORTHO05D003698 6.1e-15 87.0 159 30.2
Atru.chr4.1400 Acer truncatum HOM05D003228 ORTHO05D003698 8.0e-15 86.7 159 30.8
Atru.chr1.469 Acer truncatum HOM05D003228 ORTHO05D003698 1.4e-14 85.9 159 29.6
unitig_52.g17706 Utricularia gibba HOM05D003228 ORTHO05D003698 2.3e-14 85.1 159 30.2
Atru.chr4.1409 Acer truncatum HOM05D003228 ORTHO05D003698 3.0e-14 84.7 159 30.2
A09p01380 Brassica napus HOM05D003228 ORTHO05D003698 3.0e-14 84.7 193 26.9
BraA09t35802Z Brassica rapa HOM05D003228 ORTHO05D003698 4.0e-14 84.3 193 26.9
CDE04G0051 Ceratophyllum demersum HOM05D003228 ORTHO05D003698 5.2e-14 84.0 159 30.8
MSTRG.4827 Avicennia marina HOM05D003228 ORTHO05D003698 8.8e-14 83.2 160 29.4
A01p28720 Brassica napus HOM05D003228 ORTHO05D003698 8.8e-14 83.2 149 31.5
C01p36370 Brassica napus HOM05D003228 ORTHO05D003698 8.8e-14 83.2 149 31.5
BolC1t03595H Brassica oleracea HOM05D003228 ORTHO05D003698 8.8e-14 83.2 149 31.5
BraA01t03031Z Brassica rapa HOM05D003228 ORTHO05D003698 8.8e-14 83.2 149 31.5
Oeu010637.2 Olea europaea HOM05D003228 ORTHO05D003698 8.8e-14 83.2 160 31.9
AL1G66400 Arabidopsis lyrata HOM05D003228 ORTHO05D003698 1.5e-13 82.4 198 26.8
AT1G56550 Arabidopsis thaliana HOM05D003228 ORTHO05D003698 1.5e-13 82.4 202 26.7
BcaB04g20219 Brassica carinata HOM05D003228 ORTHO05D003698 2.0e-13 82.0 146 30.8
BraA03t12320Z Brassica rapa HOM05D003228 ORTHO05D003698 2.0e-13 82.0 159 29.6
CDE03G0330 Ceratophyllum demersum HOM05D003228 ORTHO05D003698 2.0e-13 82.0 159 30.8
Lj4g0022863 Lotus japonicus HOM05D003228 ORTHO05D003698 2.0e-13 82.0 159 29.6
SGA_v2.0_scaffold11G05701 Striga asiatica HOM05D003228 ORTHO05D003698 2.0e-13 82.0 160 31.9
SHI13338 Sapria himalayana HOM05D003228 ORTHO05D003698 3.4e-13 81.3 159 28.9
BcaB01g02325 Brassica carinata HOM05D003228 ORTHO05D003698 4.4e-13 80.9 160 28.1
Pp3c18_10930 Physcomitrium patens HOM05D003228 ORTHO05D003698 4.4e-13 80.9 156 31.4
Atru.chr5.604 Acer truncatum HOM05D003228 ORTHO05D003698 5.7e-13 80.5 159 28.9
BcaB01g02101 Brassica carinata HOM05D003228 ORTHO05D003698 5.7e-13 80.5 178 28.1
BraA08t33098Z Brassica rapa HOM05D003228 ORTHO05D003698 5.7e-13 80.5 199 28.6
Migut.N01577 Erythranthe guttata HOM05D003228 ORTHO05D003698 5.7e-13 80.5 160 30.6
Sed0019683 Sechium edule HOM05D003228 ORTHO05D003698 5.7e-13 80.5 185 27.0
AT4G01770 Arabidopsis thaliana HOM05D003228 ORTHO05D003698 7.5e-13 80.1 199 28.1
A01p28730 Brassica napus HOM05D003228 ORTHO05D003698 7.5e-13 80.1 202 26.7
Lj9A594G57 Lonicera japonica HOM05D003228 ORTHO05D003698 7.5e-13 80.1 160 28.8
Aqoxy3G00722 Aquilegia oxysepala HOM05D003228 ORTHO05D003698 9.8e-13 79.7 160 28.8
BcaB01g02400 Brassica carinata HOM05D003228 ORTHO05D003698 9.8e-13 79.7 185 27.0
BraA01t03030Z Brassica rapa HOM05D003228 ORTHO05D003698 9.8e-13 79.7 202 27.2
Oeu004916.1 Olea europaea HOM05D003228 ORTHO05D003698 9.8e-13 79.7 160 30.6
Sp6g06480 Schrenkiella parvula HOM05D003228 ORTHO05D003698 9.8e-13 79.7 159 28.9
SEGI_34630 Sequoiadendron giganteum HOM05D003228 ORTHO05D003698 9.8e-13 79.7 159 27.7
AT4G01750 Arabidopsis thaliana HOM05D003228 ORTHO05D003698 1.3e-12 79.3 184 28.8
BcaC01g06790 Brassica carinata HOM05D003228 ORTHO05D003698 1.3e-12 79.3 184 27.2
BolC3t16109H Brassica oleracea HOM05D003228 ORTHO05D003698 1.3e-12 79.3 184 27.2
BraA03t12317Z Brassica rapa HOM05D003228 ORTHO05D003698 1.3e-12 79.3 185 27.6
Carub.0006s3545 Capsella rubella HOM05D003228 ORTHO05D003698 1.3e-12 79.3 184 27.7
Ciclev10020808m.g Citrus clementina HOM05D003228 ORTHO05D003698 1.3e-12 79.3 159 28.9
Dinv43878 Davidia involucrata HOM05D003228 ORTHO05D003698 1.3e-12 79.3 160 28.8
A03p31940 Brassica napus HOM05D003228 ORTHO05D003698 1.7e-12 79.0 160 27.5
SalBow5G3651 Salvia bowleyana HOM05D003228 ORTHO05D003698 1.7e-12 79.0 160 30.0
BcaB04g20220 Brassica carinata HOM05D003228 ORTHO05D003698 2.2e-12 78.6 159 28.9
BcaC04g24064 Brassica carinata HOM05D003228 ORTHO05D003698 2.2e-12 78.6 199 26.6
BcaC06g31790 Brassica carinata HOM05D003228 ORTHO05D003698 2.2e-12 78.6 159 28.9
A03p31390 Brassica napus HOM05D003228 ORTHO05D003698 2.2e-12 78.6 159 28.9
C09p01480 Brassica napus HOM05D003228 ORTHO05D003698 2.2e-12 78.6 199 26.6
BolC9t53082H Brassica oleracea HOM05D003228 ORTHO05D003698 2.2e-12 78.6 199 26.6
Lalb_Chr13g0293481 Lupinus albus HOM05D003228 ORTHO05D003698 2.2e-12 78.6 159 29.6
Sed0007611 Sechium edule HOM05D003228 ORTHO05D003698 2.2e-12 78.6 183 27.9
Sc01g0003120 Simmondsia chinensis HOM05D003228 ORTHO05D003698 2.2e-12 78.6 159 28.9
BcaC02g10646 Brassica carinata HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
A03p66180 Brassica napus HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
C01p36380 Brassica napus HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
C03p38960 Brassica napus HOM05D003228 ORTHO05D003698 2.8e-12 78.2 160 27.5
C04p26170 Brassica napus HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
BolC4t24187H Brassica oleracea HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
BraA03t12366Z Brassica rapa HOM05D003228 ORTHO05D003698 2.8e-12 78.2 160 27.5
BraA03t15670Z Brassica rapa HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
Carub.0002s0746 Capsella rubella HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
MBI06_g38100_MAGBIO Magnolia biondii HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
Sp2g03680 Schrenkiella parvula HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.9
Solyc01g095290.4 Solanum lycopersicum HOM05D003228 ORTHO05D003698 2.8e-12 78.2 160 28.1
Sopen01g039080 Solanum pennellii HOM05D003228 ORTHO05D003698 2.8e-12 78.2 160 28.1
TAR629G0966 Trochodendron aralioides HOM05D003228 ORTHO05D003698 2.8e-12 78.2 159 28.3
BcaC01g06852 Brassica carinata HOM05D003228 ORTHO05D003698 3.7e-12 77.8 160 27.5
BcaNung06369 Brassica carinata HOM05D003228 ORTHO05D003698 3.7e-12 77.8 159 28.9
A03p31370 Brassica napus HOM05D003228 ORTHO05D003698 3.7e-12 77.8 184 27.2
BolC1t03596H Brassica oleracea HOM05D003228 ORTHO05D003698 3.7e-12 77.8 159 28.9
BolC3t16168H Brassica oleracea HOM05D003228 ORTHO05D003698 3.7e-12 77.8 160 27.5
Potri.002G166000 Populus trichocarpa HOM05D003228 ORTHO05D003698 3.7e-12 77.8 159 27.7
C03p38300 Brassica napus HOM05D003228 ORTHO05D003698 4.9e-12 77.4 159 30.2
CSS0026017 Camellia sinensis var. sinensis HOM05D003228 ORTHO05D003698 4.9e-12 77.4 160 28.8
CSS0034848 Camellia sinensis var. sinensis HOM05D003228 ORTHO05D003698 4.9e-12 77.4 160 28.8
Carub.0006s3626 Capsella rubella HOM05D003228 ORTHO05D003698 4.9e-12 77.4 160 28.1
Phvul.002G188500 Phaseolus vulgaris HOM05D003228 ORTHO05D003698 4.9e-12 77.4 159 28.9
AT4G01220 Arabidopsis thaliana HOM05D003228 ORTHO05D003698 6.3e-12 77.0 160 27.5
BcaC04g24133 Brassica carinata HOM05D003228 ORTHO05D003698 6.3e-12 77.0 160 27.5
CAN.G78.142 Capsicum annuum HOM05D003228 ORTHO05D003698 6.3e-12 77.0 160 28.1
MELO3C021174.2 Cucumis melo HOM05D003228 ORTHO05D003698 6.3e-12 77.0 183 26.8
CsaV3_6G000950 Cucumis sativus L. HOM05D003228 ORTHO05D003698 6.3e-12 77.0 183 26.8
Gohir.D08G148500 Gossypium hirsutum HOM05D003228 ORTHO05D003698 6.3e-12 77.0 159 28.3
Gorai.004G154200 Gossypium raimondii HOM05D003228 ORTHO05D003698 6.3e-12 77.0 159 28.3
Sabra02G0145600 Salix brachista HOM05D003228 ORTHO05D003698 6.3e-12 77.0 159 27.7
Sp2g03670 Schrenkiella parvula HOM05D003228 ORTHO05D003698 6.3e-12 77.0 159 28.9
TWI14G1168 Tripterygium wilfordii HOM05D003228 ORTHO05D003698 6.3e-12 77.0 160 27.5
Actinidia10086 Actinidia chinensis HOM05D003228 ORTHO05D003698 8.3e-12 76.6 160 28.1
AL6G51520 Arabidopsis lyrata HOM05D003228 ORTHO05D003698 8.3e-12 76.6 185 28.1
AL6G51580 Arabidopsis lyrata HOM05D003228 ORTHO05D003698 8.3e-12 76.6 159 30.8
BcaB04g18209 Brassica carinata HOM05D003228 ORTHO05D003698 8.3e-12 76.6 199 27.6
Eucgr.E00084 Eucalyptus grandis HOM05D003228 ORTHO05D003698 8.3e-12 76.6 160 28.1
Thhalv10024115m.g Eutrema salsugineum HOM05D003228 ORTHO05D003698 8.3e-12 76.6 159 28.9
MBI07_g26935_MAGBIO Magnolia biondii HOM05D003228 ORTHO05D003698 8.3e-12 76.6 159 28.3
Prupe.2G179700 Prunus persica HOM05D003228 ORTHO05D003698 8.3e-12 76.6 160 27.5
AL6G51550 Arabidopsis lyrata HOM05D003228 ORTHO05D003698 1.1e-11 76.3 159 28.9
BcaB01g02394 Brassica carinata HOM05D003228 ORTHO05D003698 1.1e-11 76.3 159 30.2
BolC3t16111H Brassica oleracea HOM05D003228 ORTHO05D003698 1.1e-11 76.3 159 30.2
ClCG06G003330 Citrullus lanatus HOM05D003228 ORTHO05D003698 1.1e-11 76.3 183 26.8
Cc02_g38750 Coffea canephora HOM05D003228 ORTHO05D003698 1.1e-11 76.3 160 26.9
Thhalv10024021m.g Eutrema salsugineum HOM05D003228 ORTHO05D003698 1.1e-11 76.3 146 29.5
Sp6g01780 Schrenkiella parvula HOM05D003228 ORTHO05D003698 1.1e-11 76.3 178 29.2
PGSC0003DMG400000077 Solanum tuberosum HOM05D003228 ORTHO05D003698 1.1e-11 76.3 160 27.5
Aa31LG5G790 Aethionema arabicum HOM05D003228 ORTHO05D003698 1.4e-11 75.9 160 27.5
CANSAT56G0435 Cannabis sativa HOM05D003228 ORTHO05D003698 1.4e-11 75.9 159 27.7
Cpa.g.sc184.13 Carica papaya HOM05D003228 ORTHO05D003698 1.4e-11 75.9 159 27.7
Hma1.2p1_0322F.1_g125030 Hydrangea macrophylla HOM05D003228 ORTHO05D003698 1.4e-11 75.9 160 27.5
TAR374G1459 Trochodendron aralioides HOM05D003228 ORTHO05D003698 1.4e-11 75.9 159 27.7
VMungo0251G1394 Vigna mungo HOM05D003228 ORTHO05D003698 1.4e-11 75.9 159 28.3
BcaB01g02399 Brassica carinata HOM05D003228 ORTHO05D003698 1.8e-11 75.5 165 28.5
A08p11060 Brassica napus HOM05D003228 ORTHO05D003698 1.8e-11 75.5 199 27.6
CiPaw.01G069500 Carya illinoinensis HOM05D003228 ORTHO05D003698 1.8e-11 75.5 159 27.7
Duzib133G0604 Durio zibethinus HOM05D003228 ORTHO05D003698 1.8e-11 75.5 159 28.3
Sp6g00900 Schrenkiella parvula HOM05D003228 ORTHO05D003698 1.8e-11 75.5 160 27.5
Ca_18235_v3 Cicer arietinum L. HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 29.6
Thhalv10029467m.g Eutrema salsugineum HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 27.7
Gohir.A08G127100 Gossypium hirsutum HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 29.6
Lalb_Chr07g0188261 Lupinus albus HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 28.9
MD01G1073300 Malus domestica HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 27.7
Manes.05G027900 Manihot esculenta HOM05D003228 ORTHO05D003698 2.4e-11 75.1 159 27.7
Haze_15587 Corylus avellana HOM05D003228 ORTHO05D003698 3.1e-11 74.7 159 27.7
Haze_15593 Corylus avellana HOM05D003228 ORTHO05D003698 3.1e-11 74.7 159 27.7
Sp6g01790 Schrenkiella parvula HOM05D003228 ORTHO05D003698 3.1e-11 74.7 185 27.0
TPR.G23818 Trifolium pratense HOM05D003228 ORTHO05D003698 3.1e-11 74.7 159 28.9
EL10Ac1g00337 Beta vulgaris HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 28.3
Thhalv10015591m.g Eutrema salsugineum HOM05D003228 ORTHO05D003698 4.1e-11 74.3 150 29.3
Thhalv10028748m.g Eutrema salsugineum HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 27.7
FvH4_5g17520 Fragaria vesca HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 28.3
FAN08G1910 Fragaria x ananassa HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 28.3
FAN18G0584 Fragaria x ananassa HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 28.3
Manes.01G251100 Manihot esculenta HOM05D003228 ORTHO05D003698 4.1e-11 74.3 157 27.4
RcHm_v2.0_Chr7g0178141 Rosa chinensis HOM05D003228 ORTHO05D003698 4.1e-11 74.3 159 28.3
GSVIVG01027019001 Vitis vinifera HOM05D003228 ORTHO05D003698 4.1e-11 74.3 160 27.5
CARHR249940 Cardamine hirsuta HOM05D003228 ORTHO05D003698 5.4e-11 73.9 159 29.6
Medtr4g094738 Medicago truncatula HOM05D003228 ORTHO05D003698 5.4e-11 73.9 159 29.6
Hund16681 Selenicereus undatus HOM05D003228 ORTHO05D003698 5.4e-11 73.9 159 28.9
unitig_8.g3402 Utricularia gibba HOM05D003228 ORTHO05D003698 5.4e-11 73.9 160 28.8
arahy.Tifrunner.gnm1.ann1.AA9XFA Arachis hypogaea HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 28.3
arahy.Tifrunner.gnm1.ann1.D3X9WH Arachis hypogaea HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 28.3
arahy.Tifrunner.gnm1.ann1.YLJW1T Arachis hypogaea HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 28.3
CARHR249080 Cardamine hirsuta HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 27.0
Duzib138G0843 Durio zibethinus HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 27.7
Psat7g088200 Pisum sativum HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 30.2
Hund27235 Selenicereus undatus HOM05D003228 ORTHO05D003698 7.0e-11 73.6 159 28.9
AagrBONN_evm.TU.Sc2ySwM_344.216 Anthoceros agrestis HOM05D003228 ORTHO05D003698 9.1e-11 73.2 132 37.9
DCAR_025233 Daucus carota HOM05D003228 ORTHO05D003698 9.1e-11 73.2 160 28.8
Rhsim10G0140800 Rhododendron simsii HOM05D003228 ORTHO05D003698 9.1e-11 73.2 160 27.5
GSVIVG01016220001 Vitis vinifera HOM05D003228 ORTHO05D001724 9.1e-11 73.2 159 28.3
FAN13G0201 Fragaria x ananassa HOM05D003228 ORTHO05D003698 1.2e-10 72.8 159 28.3
Potri.014G092400 Populus trichocarpa HOM05D003228 ORTHO05D003698 1.2e-10 72.8 159 27.0
arahy.Tifrunner.gnm1.ann1.L3CQ76 Arachis hypogaea HOM05D003228 ORTHO05D003698 1.6e-10 72.4 159 28.3
Glyma.08G088500 Glycine max HOM05D003228 ORTHO05D003698 1.6e-10 72.4 160 28.8
PSO135G0627 Papaver somniferum HOM05D003228 ORTHO05D003698 1.6e-10 72.4 146 27.4
PSO384G2082 Papaver somniferum HOM05D003228 ORTHO05D003698 1.6e-10 72.4 150 27.3
Gohir.A08G127033 Gossypium hirsutum HOM05D003228 ORTHO05D003698 2.0e-10 72.0 147 29.9
PSO675G4679 Papaver somniferum HOM05D003228 ORTHO05D003698 2.0e-10 72.0 146 26.7
THA.LOC104801389 Tarenaya hassleriana HOM05D003228 ORTHO05D003698 2.0e-10 72.0 149 28.2
CiPaw.02G037100 Carya illinoinensis HOM05D003228 ORTHO05D003698 2.7e-10 71.6 159 27.0
Nitab4.5_0000305g0370 Nicotiana tabacum HOM05D003228 ORTHO05D003698 2.7e-10 71.6 160 26.2
Nitab4.5_0004748g0050 Nicotiana tabacum HOM05D003228 ORTHO05D003698 2.7e-10 71.6 159 27.0
PGR031G1043 Punica granatum HOM05D003228 ORTHO05D003698 2.7e-10 71.6 159 26.4
Thecc.01G350100 Theobroma cacao HOM05D003228 ORTHO05D003698 2.7e-10 71.6 159 27.0
BcaC07g37810 Brassica carinata HOM05D003228 ORTHO05D003698 3.5e-10 71.2 159 28.3
BolC8t48199H Brassica oleracea HOM05D003228 ORTHO05D003698 3.5e-10 71.2 159 28.3
AUR62004427 Chenopodium quinoa HOM05D003228 ORTHO05D003698 4.5e-10 70.9 159 28.3
unitig_21.g20128 Utricularia gibba HOM05D003228 ORTHO05D003698 4.5e-10 70.9 159 28.9
Os05g0386900 Oryza sativa ssp. japonica HOM05D003228 ORTHO05D003698 5.9e-10 70.5 149 31.5
HanXRQChr04g0120881 Helianthus annuus HOM05D003228 ORTHO05D003698 1.0e-09 69.7 181 27.6
Lsat_1_v5_gn_7_2560 Lactuca sativa HOM05D003228 ORTHO05D003698 1.0e-09 69.7 171 28.1
ECA236G3657 Erigeron canadensis HOM05D003228 ORTHO05D003698 1.7e-09 68.9 161 28.0
Peaxi162Scf01254g00024 Petunia axillaris HOM05D003228 ORTHO05D003698 2.3e-09 68.6 160 26.9
Zm00001eb287010 Zea mays HOM05D003228 ORTHO05D003698 2.9e-09 68.2 145 29.0
C03p38280 Brassica napus HOM05D003228 ORTHO05D003698 3.8e-09 67.8 184 23.9
ATR1127G059 Amborella trichopoda HOM05D003228 ORTHO05D003698 5.0e-09 67.4 145 26.9
vmacro13215 Vaccinium macrocarpon HOM05D003228 ORTHO05D003698 3.3e-08 64.7 196 25.0
BcaC01g06791 Brassica carinata HOM05D003228 ORTHO05D003698 2.1e-07 62.0 129 31.0
CBR_g11065 Chara braunii HOM05D003542 ORTHO05D004799 4.7e-07 60.8 169 25.4


User provided reference genes

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