Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 0.0e+00 1595.9 977 100.0
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 3.8e-71 274.2 520 40.2
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 7.6e-64 250.0 521 37.6
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 3.5e-61 241.1 471 39.3
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 6.2e-58 230.3 497 37.0
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.4e-57 229.2 354 41.2
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 3.4e-56 224.6 346 41.3
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 6.4e-55 220.3 442 39.6
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 1.1e-54 219.5 460 38.9
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 2.4e-54 218.4 447 38.5
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 5.4e-54 217.2 351 40.5
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 1.2e-53 216.1 439 37.8
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 1.6e-53 215.7 426 38.7
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 2.1e-53 215.3 360 42.5
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 2.7e-53 214.9 350 42.0
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 3.5e-53 214.5 354 41.2
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 3.5e-53 214.5 362 41.7
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 3.5e-53 214.5 344 43.0
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 3.5e-53 214.5 434 39.9
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 6.0e-53 213.8 351 41.9
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 6.0e-53 213.8 405 39.8
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 7.9e-53 213.4 449 37.4
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 7.9e-53 213.4 449 37.4
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 7.9e-53 213.4 456 37.5
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 7.9e-53 213.4 430 38.8
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 7.9e-53 213.4 344 43.0
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.0e-52 213.0 354 41.8
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 1.3e-52 212.6 462 37.4
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 1.8e-52 212.2 436 36.5
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.3e-52 211.8 356 39.9
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.3e-52 211.8 356 39.9
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.3e-52 211.8 444 37.6
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 2.3e-52 211.8 354 41.5
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 3.0e-52 211.5 447 38.3
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 3.0e-52 211.5 511 35.2
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 3.9e-52 211.1 345 42.6
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.1e-52 210.7 362 41.2
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 5.1e-52 210.7 363 41.3
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 5.1e-52 210.7 464 36.4
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 8.7e-52 209.9 375 40.3
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 1.5e-51 209.1 351 39.9
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 1.9e-51 208.8 456 38.2
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.9e-51 208.8 336 42.0
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 1.9e-51 208.8 339 40.7
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 3.3e-51 208.0 438 37.0
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 4.3e-51 207.6 349 40.7
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 5.6e-51 207.2 351 39.6
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 5.6e-51 207.2 349 40.1
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 5.6e-51 207.2 364 39.8
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 1.3e-50 206.1 351 41.3
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 1.6e-50 205.7 342 40.9
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 1.6e-50 205.7 320 41.9
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.8e-50 204.9 376 40.2
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 4.8e-50 204.1 347 41.5
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 6.2e-50 203.8 361 40.2
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 8.1e-50 203.4 376 39.9
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 8.1e-50 203.4 433 37.9
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 8.1e-50 203.4 350 39.1
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 1.1e-49 203.0 292 41.1
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 5.3e-49 200.7 357 40.6
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 9.0e-49 199.9 347 39.2
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 9.0e-49 199.9 365 38.6
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 1.5e-48 199.1 362 38.7
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.5e-48 199.1 437 37.3
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.0e-48 198.7 376 39.4
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 2.0e-48 198.7 353 39.4
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 2.6e-48 198.4 347 39.5
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 2.6e-48 198.4 432 37.5
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 3.4e-48 198.0 351 40.2
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 3.4e-48 198.0 465 36.1
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 4.5e-48 197.6 349 40.4
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 5.8e-48 197.2 446 35.4
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 5.8e-48 197.2 347 40.3
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 9.9e-48 196.4 465 35.9
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 1.7e-47 195.7 444 36.0
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 4.9e-47 194.1 517 34.8
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 3.2e-46 191.4 372 37.6
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 3.2e-46 191.4 253 41.9
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 5.5e-46 190.7 403 35.7
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 5.5e-46 190.7 403 35.7
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 1.6e-45 189.1 317 40.4
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 2.1e-45 188.7 349 39.5
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 3.5e-45 188.0 336 38.7
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 4.6e-45 187.6 403 35.2
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 1.3e-44 186.0 451 36.4
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 1.3e-44 186.0 451 36.4
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 3.0e-44 184.9 461 35.1
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 3.0e-44 184.9 352 38.4
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 8.7e-44 183.3 504 34.1
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 1.9e-43 182.2 530 32.8
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.5e-43 181.8 359 35.9
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 5.6e-43 180.6 452 35.0
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 7.4e-43 180.3 460 34.6
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 1.3e-42 179.5 504 32.5
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 2.1e-42 178.7 433 34.6
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 1.8e-41 175.6 378 35.2
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 2.6e-40 171.8 462 32.5
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 2.2e-39 168.7 535 29.7
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 1.9e-38 165.6 571 31.0
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 3.2e-38 164.9 335 36.7
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 2.2e-34 152.1 293 38.9
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 3.2e-30 138.3 288 38.9
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 8.8e-28 130.2 350 34.0
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 7.4e-27 127.1 154 51.9
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.8e-26 124.4 281 35.6
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 1.4e-25 122.9 375 31.7
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.1e-25 121.7 181 45.9
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 5.9e-24 117.5 174 43.1
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 3.2e-22 111.7 95 60.0
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 1.4e-20 106.3 95 57.9
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 2.0e-19 102.4 186 34.4
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 2.0e-19 102.4 186 34.4
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 1.3e-18 99.8 188 31.9
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 3.1e-17 95.1 168 41.7
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 3.4e-16 91.7 276 29.7
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 3.0e-12 78.6 127 37.8
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 1.3e-07 63.2 83 42.2
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 5.5e-06 57.8 57 50.9


User provided reference genes

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