Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 0.0e+00 3513.8 2771 100.0
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 3.8e-28 132.9 674 31.6
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 4.0e-25 122.9 643 30.0
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 3.4e-24 119.8 665 32.6
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 1.4e-22 114.4 736 33.2
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 3.1e-22 113.2 507 30.0
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 5.4e-22 112.5 509 29.1
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 9.1e-22 111.7 506 29.6
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 2.7e-21 110.2 506 30.8
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 5.9e-21 109.0 480 31.0
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 7.7e-21 108.6 405 31.1
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 1.3e-20 107.8 400 31.5
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 2.9e-20 106.7 529 30.2
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 2.9e-20 106.7 529 30.2
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 3.8e-20 106.3 529 29.9
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 3.8e-20 106.3 248 44.4
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 1.5e-19 104.4 531 32.4
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 3.2e-19 103.2 506 29.4
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 5.5e-19 102.4 491 33.0
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 7.2e-19 102.1 491 28.3
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 7.2e-19 102.1 498 28.9
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 7.2e-19 102.1 505 32.1
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 9.5e-19 101.7 509 28.5
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 9.5e-19 101.7 515 31.5
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 3.6e-18 99.8 526 30.6
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 3.6e-18 99.8 504 28.2
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 3.6e-18 99.8 313 33.5
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 6.1e-18 99.0 503 29.4
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 6.1e-18 99.0 516 31.6
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 6.1e-18 99.0 495 34.1
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 6.1e-18 99.0 490 29.2
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 1.8e-17 97.4 383 30.5
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 2.3e-17 97.1 503 29.4
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 3.0e-17 96.7 504 30.0
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 4.0e-17 96.3 506 28.1
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 5.2e-17 95.9 495 29.1
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 8.8e-17 95.1 504 30.0
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 1.2e-16 94.7 526 30.6
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 1.5e-16 94.4 655 31.6
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 2.6e-16 93.6 516 28.3
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 3.4e-16 93.2 518 28.2
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 4.4e-16 92.8 521 28.0
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 5.7e-16 92.4 493 31.6
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 7.5e-16 92.0 512 28.9
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 9.8e-16 91.7 506 29.8
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 9.8e-16 91.7 461 30.4
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 1.3e-15 91.3 506 29.8
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 1.7e-15 90.9 525 30.7
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 2.8e-15 90.1 294 32.3
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 2.8e-15 90.1 482 29.7
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 2.8e-15 90.1 602 28.1
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 3.7e-15 89.7 478 28.9
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 3.7e-15 89.7 536 27.8
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 4.9e-15 89.4 491 29.7
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 4.9e-15 89.4 515 28.9
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 4.9e-15 89.4 455 30.8
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 4.9e-15 89.4 501 28.7
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 4.9e-15 89.4 500 28.6
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 6.3e-15 89.0 259 33.2
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 8.3e-15 88.6 482 28.8
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 8.3e-15 88.6 568 27.6
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 8.3e-15 88.6 500 28.0
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 1.4e-14 87.8 478 29.7
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 1.4e-14 87.8 530 28.3
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.4e-14 87.8 585 30.3
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.4e-14 87.8 585 30.3
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 1.8e-14 87.4 472 29.4
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 1.8e-14 87.4 505 30.5
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 2.4e-14 87.0 602 30.6
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 2.4e-14 87.0 485 28.9
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 3.1e-14 86.7 554 28.3
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 4.1e-14 86.3 507 27.4
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 5.4e-14 85.9 474 29.3
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 5.4e-14 85.9 614 28.0
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 7.0e-14 85.5 502 27.9
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 7.0e-14 85.5 493 27.8
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 9.2e-14 85.1 478 28.2
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 9.2e-14 85.1 489 28.0
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 1.2e-13 84.7 487 31.2
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 2.0e-13 84.0 509 28.1
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 2.7e-13 83.6 492 31.9
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 2.7e-13 83.6 498 32.9
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 3.5e-13 83.2 515 28.0
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 4.5e-13 82.8 524 29.6
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 5.9e-13 82.4 509 30.1
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 5.9e-13 82.4 80 60.0
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 7.8e-13 82.0 473 29.6
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 7.8e-13 82.0 556 28.8
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.0e-12 81.6 517 31.3
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.0e-12 81.6 632 27.1
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 1.3e-12 81.3 502 26.7
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 1.7e-12 80.9 83 59.0
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 3.8e-12 79.7 581 28.7
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 3.8e-12 79.7 388 31.4
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 3.8e-12 79.7 472 29.7
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 5.0e-12 79.3 495 32.5
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 8.6e-12 78.6 235 31.9
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 8.6e-12 78.6 474 31.2
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 1.9e-11 77.4 427 29.7
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 1.9e-11 77.4 234 31.2
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 2.5e-11 77.0 505 32.9
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 2.5e-11 77.0 475 32.6
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 4.3e-11 76.3 619 28.1
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 5.6e-11 75.9 568 28.3
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 7.3e-11 75.5 496 31.0
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 7.3e-11 75.5 229 32.3
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 7.3e-11 75.5 664 26.1
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 1.2e-10 74.7 697 26.7
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.6e-10 74.3 246 38.2
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.6e-10 74.3 55 69.1
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 2.1e-10 73.9 435 29.0
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 2.1e-10 73.9 491 28.3
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 2.8e-10 73.6 512 28.3
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 4.7e-10 72.8 575 28.3
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 6.1e-10 72.4 507 28.6
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 8.0e-10 72.0 331 27.2
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 8.0e-10 72.0 470 29.1
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 1.0e-09 71.6 482 30.1
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 1.4e-09 71.2 510 26.9
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.4e-09 71.2 193 32.6
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 1.8e-09 70.9 466 26.8
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 2.3e-09 70.5 471 27.6
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 3.0e-09 70.1 408 27.7
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 3.0e-09 70.1 575 27.1
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 1.5e-08 67.8 505 31.7
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 3.4e-08 66.6 667 25.2
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 7.5e-08 65.5 50 68.0
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 9.8e-08 65.1 617 32.4
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 1.3e-07 64.7 528 27.5
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 1.7e-07 64.3 482 29.9
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 2.2e-07 63.9 576 27.8
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 2.9e-07 63.5 560 31.1


User provided reference genes

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