Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 3.6e-202 708.4 421 100.0
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 7.2e-33 146.0 145 58.6
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 3.0e-31 140.6 150 54.0
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 9.7e-30 135.6 161 49.7
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 1.3e-29 135.2 169 49.1
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 3.5e-27 127.1 143 50.3
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 4.5e-27 126.7 178 42.7
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 1.7e-26 124.8 141 47.5
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 2.2e-26 124.4 160 43.1
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 2.9e-26 124.0 142 48.6
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 5.0e-26 123.2 143 47.6
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 5.0e-26 123.2 160 43.8
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 5.0e-26 123.2 143 46.2
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 5.0e-26 123.2 142 47.2
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 1.5e-25 121.7 140 49.3
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 1.5e-25 121.7 160 43.8
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 1.5e-25 121.7 141 46.8
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.9e-25 121.3 154 45.5
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 1.9e-25 121.3 141 46.8
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.9e-25 121.3 143 46.2
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 1.9e-25 121.3 149 45.6
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.9e-25 121.3 141 45.4
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 1.9e-25 121.3 144 45.1
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.9e-25 121.3 141 47.5
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 5.5e-25 119.8 153 44.4
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 7.2e-25 119.4 140 47.9
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 9.4e-25 119.0 165 38.8
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 9.4e-25 119.0 165 38.8
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 9.4e-25 119.0 165 38.8
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 9.4e-25 119.0 162 42.0
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 9.4e-25 119.0 143 46.2
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 1.2e-24 118.6 140 45.7
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 1.2e-24 118.6 140 45.0
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.2e-24 118.6 141 44.7
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 1.2e-24 118.6 140 47.1
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.6e-24 118.2 169 37.9
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.6e-24 118.2 143 45.5
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.6e-24 118.2 159 40.9
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.6e-24 118.2 159 40.3
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.6e-24 118.2 151 41.7
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 2.1e-24 117.9 165 38.8
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 2.1e-24 117.9 165 38.8
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 2.7e-24 117.5 142 46.5
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 2.7e-24 117.5 143 45.5
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 2.7e-24 117.5 150 46.0
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 3.6e-24 117.1 150 46.0
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 3.6e-24 117.1 141 45.4
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.6e-24 117.1 159 40.9
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 4.7e-24 116.7 142 45.8
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 4.7e-24 116.7 143 47.6
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 4.7e-24 116.7 159 40.3
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 6.1e-24 116.3 143 45.5
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 6.1e-24 116.3 151 41.7
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 8.0e-24 115.9 142 45.8
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 8.0e-24 115.9 144 45.1
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 8.0e-24 115.9 144 45.1
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.0e-23 115.5 150 42.0
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 1.4e-23 115.2 154 42.9
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 1.4e-23 115.2 142 45.1
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.4e-23 115.2 140 44.3
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.4e-23 115.2 142 45.1
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 1.8e-23 114.8 152 43.4
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 2.3e-23 114.4 152 42.8
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 3.0e-23 114.0 145 42.8
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 3.0e-23 114.0 141 44.7
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 3.0e-23 114.0 143 43.4
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 3.0e-23 114.0 153 41.8
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 4.0e-23 113.6 140 43.6
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 4.0e-23 113.6 150 43.3
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 5.2e-23 113.2 140 42.9
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 6.8e-23 112.8 141 41.8
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 6.8e-23 112.8 164 40.2
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 6.8e-23 112.8 171 38.6
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 8.8e-23 112.5 145 42.1
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 1.2e-22 112.1 149 44.3
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.2e-22 112.1 145 42.8
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.5e-22 111.7 172 38.4
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 1.5e-22 111.7 143 42.7
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 2.0e-22 111.3 142 44.4
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 2.0e-22 111.3 142 43.0
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 2.6e-22 110.9 157 39.5
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 2.6e-22 110.9 146 42.5
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 2.6e-22 110.9 146 42.5
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 5.7e-22 109.8 151 42.4
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 7.5e-22 109.4 150 43.3
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 9.8e-22 109.0 146 43.8
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 2.2e-21 107.8 141 43.3
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 6.3e-21 106.3 141 41.8
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.1e-20 105.5 145 40.7
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 2.0e-19 101.3 139 42.4
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.7e-18 98.2 121 46.3
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 2.3e-18 97.8 191 34.6
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.6e-14 84.3 107 45.8
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 8.3e-13 79.3 109 42.2
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.4e-12 78.6 110 42.7
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 1.2e-11 75.5 161 36.6
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.2e-11 75.5 82 47.6
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 1.8e-07 61.6 81 42.0
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.0e-06 58.2 81 40.7
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.0e-06 58.2 81 40.7
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 4.4e-06 57.0 96 37.5


User provided reference genes

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