Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 2.6e-301 1038.1 588 100.0
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 1.1e-30 139.0 193 38.9
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 3.1e-28 131.0 182 39.6
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 4.0e-28 130.6 288 34.0
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 2.1e-21 108.2 140 42.9
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 2.8e-21 107.8 140 42.9
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 3.7e-21 107.5 141 44.0
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 6.2e-21 106.7 141 44.0
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 1.1e-20 105.9 141 43.3
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 1.8e-20 105.1 141 41.8
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 3.1e-20 104.4 139 39.6
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 4.0e-20 104.0 141 41.8
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 4.0e-20 104.0 141 41.8
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 5.3e-20 103.6 141 42.6
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.3e-20 103.6 141 41.8
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.3e-20 103.6 141 41.8
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 6.9e-20 103.2 141 42.6
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 9.0e-20 102.8 141 40.4
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 9.0e-20 102.8 141 41.8
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 1.2e-19 102.4 141 42.6
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 1.2e-19 102.4 141 41.8
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 1.2e-19 102.4 141 41.8
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.2e-19 102.4 141 41.1
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 1.2e-19 102.4 141 41.1
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 1.5e-19 102.1 141 41.8
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 1.5e-19 102.1 141 41.8
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 1.5e-19 102.1 141 41.1
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 2.0e-19 101.7 141 42.6
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 2.0e-19 101.7 141 42.6
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 2.0e-19 101.7 141 42.6
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 2.6e-19 101.3 141 42.6
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 2.6e-19 101.3 141 42.6
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 2.6e-19 101.3 141 41.8
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 2.6e-19 101.3 141 42.6
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 2.6e-19 101.3 141 40.4
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 2.6e-19 101.3 130 43.1
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 3.4e-19 100.9 141 42.6
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 3.4e-19 100.9 160 38.8
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 3.4e-19 100.9 150 41.3
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 3.4e-19 100.9 141 41.1
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 3.4e-19 100.9 141 41.1
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 4.5e-19 100.5 141 42.6
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 4.5e-19 100.5 141 41.8
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 4.5e-19 100.5 141 41.1
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.8
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.8
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 40.4
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.1
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.1
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.8
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.8
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.1
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.1
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 5.8e-19 100.1 142 40.8
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 5.8e-19 100.1 141 41.1
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 7.6e-19 99.8 141 41.8
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 7.6e-19 99.8 141 41.1
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 7.6e-19 99.8 141 40.4
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 7.6e-19 99.8 140 40.7
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 7.6e-19 99.8 140 40.7
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 1.0e-18 99.4 140 41.4
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 1.0e-18 99.4 141 40.4
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 1.0e-18 99.4 140 42.1
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.0e-18 99.4 142 40.8
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 1.0e-18 99.4 141 40.4
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 1.3e-18 99.0 140 42.1
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 1.3e-18 99.0 141 40.4
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 1.3e-18 99.0 141 39.7
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 1.3e-18 99.0 141 41.8
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 1.7e-18 98.6 141 42.6
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 1.7e-18 98.6 141 41.1
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.7e-18 98.6 141 39.7
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.7e-18 98.6 141 41.1
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 1.7e-18 98.6 141 41.8
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 2.2e-18 98.2 136 41.2
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 41.8
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 41.1
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 41.8
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 41.1
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 2.2e-18 98.2 157 38.9
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 39.0
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 2.2e-18 98.2 163 38.7
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 39.7
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 42.6
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 2.2e-18 98.2 141 40.4
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 39.7
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 39.7
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.9e-18 97.8 139 38.8
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 41.8
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 39.7
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 41.1
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 41.1
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 41.1
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 41.1
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 2.9e-18 97.8 141 40.4
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 3.8e-18 97.4 140 40.7
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.8e-18 97.4 141 40.4
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 3.8e-18 97.4 141 40.4
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 3.8e-18 97.4 141 41.8
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 3.8e-18 97.4 161 37.3
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 3.8e-18 97.4 140 38.6
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 4.9e-18 97.1 140 37.9
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 41.1
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 4.9e-18 97.1 141 39.7
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 4.9e-18 97.1 197 32.5
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 6.5e-18 96.7 141 41.8
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 8.4e-18 96.3 141 39.0
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 8.4e-18 96.3 141 41.8
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 1.4e-17 95.5 141 40.4
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.4e-17 95.5 141 41.8
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 1.9e-17 95.1 141 38.3
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 3.2e-17 94.4 141 40.4
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 4.2e-17 94.0 140 38.6
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 7.1e-17 93.2 134 41.0
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 1.2e-16 92.4 120 43.3
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 1.2e-16 92.4 141 39.0
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 1.2e-16 92.4 218 33.0
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-16 91.3 142 39.4
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 2.7e-16 91.3 142 39.4
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 2.7e-16 91.3 142 39.4
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 2.7e-16 91.3 142 39.4
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 2.7e-16 91.3 140 40.0
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 4.6e-16 90.5 120 41.7
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 6.0e-16 90.1 145 42.1
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 1.3e-15 89.0 129 42.6
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 1.3e-15 89.0 136 38.2
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.8e-15 88.6 141 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 1.5e-14 85.5 246 31.3
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 2.5e-14 84.7 168 34.5
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 7.4e-14 83.2 119 37.8
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 4.8e-13 80.5 141 39.0
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 4.8e-13 80.5 140 36.4
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 8.2e-13 79.7 136 39.0
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 1.1e-09 69.3 107 43.0
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 9.3e-09 66.2 129 34.1
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 1.6e-08 65.5 107 39.3
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 4.3e-06 57.4 78 43.6


User provided reference genes

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