Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 5.0e-220 767.7 455 100.0
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 2.0e-43 181.0 183 50.3
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 3.2e-41 173.7 184 51.6
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 2.2e-37 161.0 184 46.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 8.2e-37 159.1 179 47.5
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 1.4e-36 158.3 180 47.8
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 4.1e-36 156.8 195 47.2
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 4.1e-36 156.8 179 48.6
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 4.1e-36 156.8 189 49.2
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 5.3e-36 156.4 178 49.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 6.9e-36 156.0 188 48.4
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 9.1e-36 155.6 187 47.6
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.4e-35 153.7 183 47.5
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.7e-35 152.5 180 47.2
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.7e-35 152.5 180 47.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.3e-34 151.8 179 48.0
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.3e-34 151.8 184 45.7
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.3e-34 151.8 178 48.3
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.7e-34 151.4 180 46.1
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.7e-34 151.4 179 46.4
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-34 151.0 179 48.0
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.2e-34 151.0 179 48.0
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 2.2e-34 151.0 179 48.0
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 2.2e-34 151.0 180 48.3
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 2.9e-34 150.6 179 48.0
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 2.9e-34 150.6 184 47.3
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.8e-34 150.2 179 48.0
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 3.8e-34 150.2 182 47.3
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 3.8e-34 150.2 193 45.1
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 3.8e-34 150.2 189 47.1
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 3.8e-34 150.2 179 47.5
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 5.0e-34 149.8 179 47.5
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 5.0e-34 149.8 179 48.0
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 5.0e-34 149.8 179 48.0
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 5.0e-34 149.8 189 42.9
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 6.5e-34 149.4 179 44.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 6.5e-34 149.4 179 47.5
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 6.5e-34 149.4 193 44.6
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 6.5e-34 149.4 183 42.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 8.5e-34 149.1 183 44.3
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 8.5e-34 149.1 189 45.0
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 8.5e-34 149.1 188 46.8
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 1.1e-33 148.7 179 47.5
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 1.1e-33 148.7 187 48.7
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 1.1e-33 148.7 178 47.8
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.4e-33 148.3 188 46.8
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.4e-33 148.3 189 42.9
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.4e-33 148.3 189 42.9
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.4e-33 148.3 189 44.4
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.9e-33 147.9 189 42.9
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.9e-33 147.9 184 47.8
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 2.5e-33 147.5 179 44.7
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.2e-33 147.1 189 42.9
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 4.2e-33 146.7 198 44.4
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 4.2e-33 146.7 203 45.3
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 5.5e-33 146.4 183 44.3
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 5.5e-33 146.4 188 46.3
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 5.5e-33 146.4 180 46.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 7.2e-33 146.0 186 45.7
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 7.2e-33 146.0 186 45.7
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 9.4e-33 145.6 187 46.5
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 9.4e-33 145.6 189 41.8
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.2e-32 145.2 189 41.8
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 1.2e-32 145.2 179 45.8
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 1.6e-32 144.8 184 44.6
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.6e-32 144.8 184 44.6
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.1e-32 144.4 189 41.8
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.7e-32 144.1 184 44.0
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 2.7e-32 144.1 189 41.8
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 2.7e-32 144.1 189 41.8
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.7e-32 144.1 188 45.2
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 3.6e-32 143.7 178 45.5
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 3.6e-32 143.7 188 45.7
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 3.6e-32 143.7 188 45.7
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 4.7e-32 143.3 186 45.2
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 6.1e-32 142.9 183 43.7
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 6.1e-32 142.9 178 46.1
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 6.1e-32 142.9 178 44.9
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 7.9e-32 142.5 178 44.9
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.4e-31 141.7 179 44.1
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 2.3e-31 141.0 157 51.0
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 3.0e-31 140.6 186 44.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 8.8e-31 139.0 186 44.1
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.0e-30 137.9 206 39.3
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 4.4e-30 136.7 166 46.4
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 5.7e-30 136.3 191 42.9
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 7.4e-30 136.0 183 42.6
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 7.4e-30 136.0 165 43.0
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.3e-29 135.2 182 42.9
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.3e-29 132.9 224 36.6
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 6.3e-29 132.9 192 42.2
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.1e-28 132.1 179 43.0
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 2.4e-28 131.0 243 37.0
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.2e-27 128.6 180 40.0
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.0e-26 125.6 179 43.6
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 5.5e-25 119.8 157 44.6
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 8.8e-23 112.5 188 38.8
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 7.4e-22 109.4 164 40.9
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.7e-21 107.1 178 36.0
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.7e-21 107.1 154 44.2
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 2.4e-20 104.4 154 42.9
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.2e-19 102.1 176 39.8
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.0e-19 101.3 174 41.4
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 2.0e-19 101.3 155 42.6
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.5e-19 100.5 154 38.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.3e-18 98.6 155 41.3
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.7e-18 98.2 176 38.6
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 4.7e-16 90.1 165 35.8
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 8.0e-16 89.4 183 34.4
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 5.2e-15 86.7 166 34.3
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 8.8e-15 85.9 145 39.3
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 9.7e-14 82.4 132 40.2
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 1.7e-13 81.6 76 53.9
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.5e-11 73.9 88 48.9
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 2.9e-10 70.9 76 53.9


User provided reference genes

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