Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 3.4e-89 332.0 218 100.0
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 2.2e-27 126.7 162 39.5
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 5.3e-26 122.1 162 37.7
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 6.9e-26 121.7 155 39.4
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 9.1e-26 121.3 162 37.0
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 9.1e-26 121.3 161 36.0
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.2e-25 120.9 166 38.0
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.2e-25 120.9 162 37.7
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 1.5e-25 120.6 155 38.1
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 2.0e-25 120.2 155 38.7
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 3.4e-25 119.4 162 36.4
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 4.5e-25 119.0 148 38.5
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 4.5e-25 119.0 162 35.2
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 5.9e-25 118.6 162 38.9
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 5.9e-25 118.6 148 37.8
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.0e-24 117.9 162 37.0
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 1.0e-24 117.9 162 35.8
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 1.3e-24 117.5 155 38.7
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.3e-24 117.5 155 36.8
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.2e-24 116.7 148 38.5
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 2.9e-24 116.3 162 37.0
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 3.8e-24 115.9 155 38.7
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 5.0e-24 115.5 155 35.5
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 5.0e-24 115.5 141 41.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 1.1e-23 114.4 162 34.6
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.4e-23 114.0 162 34.6
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 1.9e-23 113.6 155 35.5
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 2.5e-23 113.2 155 37.4
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 2.5e-23 113.2 155 36.8
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.5e-23 113.2 166 35.5
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.5e-23 113.2 163 35.6
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.5e-23 113.2 155 36.8
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 3.2e-23 112.8 148 37.2
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 4.2e-23 112.5 162 35.8
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 5.5e-23 112.1 160 37.5
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 5.5e-23 112.1 162 35.2
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 5.5e-23 112.1 162 35.2
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 7.2e-23 111.7 155 36.8
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 7.2e-23 111.7 155 36.1
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 9.4e-23 111.3 155 37.4
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 9.4e-23 111.3 155 36.1
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 9.4e-23 111.3 162 35.8
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 1.2e-22 110.9 141 38.3
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 1.6e-22 110.5 157 36.9
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 1.6e-22 110.5 160 36.9
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 1.6e-22 110.5 155 35.5
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.1e-22 110.2 162 33.3
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 2.1e-22 110.2 155 35.5
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 2.1e-22 110.2 162 34.0
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.7e-22 109.8 166 33.1
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 2.7e-22 109.8 166 33.1
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 2.7e-22 109.8 148 37.8
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 2.7e-22 109.8 162 35.2
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 2.7e-22 109.8 162 34.6
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 4.7e-22 109.0 162 34.0
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 4.7e-22 109.0 148 37.8
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 4.7e-22 109.0 162 34.0
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 6.1e-22 108.6 162 32.1
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 6.1e-22 108.6 171 33.3
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 1.0e-21 107.8 162 34.0
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 1.4e-21 107.5 159 33.3
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 1.8e-21 107.1 148 37.8
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.3e-21 106.7 155 33.5
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 2.3e-21 106.7 166 32.5
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 2.3e-21 106.7 141 38.3
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 3.0e-21 106.3 152 35.5
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 3.0e-21 106.3 162 32.7
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 3.9e-21 105.9 155 34.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 5.2e-21 105.5 167 32.9
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 6.7e-21 105.1 162 32.7
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 6.7e-21 105.1 162 32.7
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 6.7e-21 105.1 128 35.9
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 8.8e-21 104.8 155 32.9
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 8.8e-21 104.8 161 33.5
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 1.1e-20 104.4 162 35.8
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.1e-20 104.4 162 32.1
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 1.5e-20 104.0 162 32.7
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.0e-20 103.6 149 34.2
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 2.0e-20 103.6 162 32.1
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 4.4e-20 102.4 153 31.4
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.8e-19 99.0 162 31.5
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 3.1e-18 96.3 121 34.7
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 8.8e-13 78.2 216 24.1
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.5e-12 77.4 88 38.6
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-12 77.4 104 38.5
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.5e-12 77.4 104 39.4
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 3.3e-12 76.3 95 36.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 5.7e-12 75.5 104 36.5
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 2.8e-11 73.2 196 26.0
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 6.3e-11 72.0 97 32.0
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 8.2e-11 71.6 115 32.2
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 1.1e-10 71.2 88 34.1
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.1e-10 69.7 95 33.7
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 9.1e-10 68.2 98 31.6
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.7e-09 66.6 155 29.7
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.7e-09 66.6 92 34.8
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 3.5e-09 66.2 95 32.6
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 3.6e-06 56.2 91 30.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 4.7e-06 55.8 163 25.8


User provided reference genes

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