Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g18647 Chara braunii HOM05D004607 ORTHO05D005836 1.5e-107 392.9 201 100.0
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 3.8e-10 69.3 146 35.6
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 4.9e-10 68.9 135 33.3
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 8.4e-10 68.2 183 29.5
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 8.4e-10 68.2 183 29.5
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 2.4e-09 66.6 179 33.0
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.4e-09 66.6 179 33.0
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 3.2e-09 66.2 167 33.5
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 4.2e-09 65.9 171 32.2
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.6e-08 63.9 174 32.8
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 1.6e-08 63.9 128 32.8
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 2.7e-08 63.2 128 32.8
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 2.7e-08 63.2 173 30.6
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 3.5e-08 62.8 123 37.4
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 4.6e-08 62.4 140 34.3
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 6.0e-08 62.0 160 33.1
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 6.0e-08 62.0 160 31.2
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.0e-07 61.2 149 32.2
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 1.0e-07 61.2 109 40.4
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.3e-07 60.8 158 30.4
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.3e-07 60.8 165 30.3
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 1.3e-07 60.8 141 31.9
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.8e-07 60.5 136 33.1
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.8e-07 60.5 165 29.1
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 2.3e-07 60.1 158 28.5
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 2.3e-07 60.1 164 32.3
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 3.0e-07 59.7 162 30.9
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.0e-07 59.7 131 32.1
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 3.0e-07 59.7 167 32.3
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 3.0e-07 59.7 160 30.6
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.0e-07 59.7 143 32.2
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 3.9e-07 59.3 158 29.7
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.9e-07 59.3 131 32.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 5.1e-07 58.9 169 29.6
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 6.7e-07 58.5 146 32.2
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 6.7e-07 58.5 171 28.7
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 6.7e-07 58.5 142 28.2
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 6.7e-07 58.5 128 32.0
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 8.7e-07 58.2 158 31.0
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 8.7e-07 58.2 133 28.6
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 1.1e-06 57.8 158 28.5
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 1.1e-06 57.8 158 28.5
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.1e-06 57.8 133 30.8
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 1.1e-06 57.8 157 30.6
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 1.1e-06 57.8 97 33.0
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 1.5e-06 57.4 165 29.1
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.5e-06 57.4 159 28.9
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.5e-06 57.4 131 31.3
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.5e-06 57.4 135 28.9
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 1.5e-06 57.4 171 26.3
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 1.5e-06 57.4 115 33.9
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 1.9e-06 57.0 122 32.8
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.9e-06 57.0 165 32.1
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 2.5e-06 56.6 158 28.5
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 2.5e-06 56.6 157 26.8
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 2.5e-06 56.6 157 26.8
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 2.5e-06 56.6 171 31.0
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 2.5e-06 56.6 130 33.1
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 3.3e-06 56.2 158 28.5
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 3.3e-06 56.2 128 31.2
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 3.3e-06 56.2 169 29.6
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 3.3e-06 56.2 157 29.9
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.3e-06 56.2 165 26.1
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 3.3e-06 56.2 133 31.6
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 4.3e-06 55.8 128 31.2
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.3e-06 55.8 132 31.8
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 5.6e-06 55.5 163 27.6
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 5.6e-06 55.5 163 27.6
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 5.6e-06 55.5 158 27.2
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 7.4e-06 55.1 157 31.2
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 7.4e-06 55.1 129 28.7
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 7.4e-06 55.1 131 33.6
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 9.6e-06 54.7 121 31.4
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 9.6e-06 54.7 171 31.0
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 9.6e-06 54.7 172 30.2


User provided reference genes

Program Settings