Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 1.7e-258 895.6 491 100.0
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.8e-37 161.4 157 55.4
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 3.7e-35 153.7 145 56.6
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.4e-34 151.0 149 53.0
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 7.0e-34 149.4 151 49.7
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 4.9e-27 126.7 127 51.2
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 1.1e-26 125.6 134 48.5
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 4.1e-26 123.6 128 49.2
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 4.1e-26 123.6 125 50.4
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 2.0e-25 121.3 126 49.2
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 2.0e-25 121.3 128 47.7
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 3.5e-25 120.6 166 42.8
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 3.5e-25 120.6 125 49.6
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 3.5e-25 120.6 148 45.9
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 4.6e-25 120.2 126 49.2
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 4.6e-25 120.2 133 49.6
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 5.9e-25 119.8 156 44.2
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 5.9e-25 119.8 156 45.5
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 7.8e-25 119.4 164 43.9
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 7.8e-25 119.4 135 48.9
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 7.8e-25 119.4 132 47.7
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.0e-24 119.0 153 45.8
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 1.0e-24 119.0 132 47.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 1.0e-24 119.0 125 48.8
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.3e-24 118.6 123 51.2
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.3e-24 118.6 150 44.0
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-24 118.6 135 48.9
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-24 118.6 135 48.9
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 1.7e-24 118.2 133 46.6
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.7e-24 118.2 125 48.8
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 2.3e-24 117.9 125 48.0
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 3.0e-24 117.5 125 50.4
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 3.9e-24 117.1 128 46.1
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 5.0e-24 116.7 180 39.4
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 5.0e-24 116.7 135 48.1
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 5.0e-24 116.7 140 45.7
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 5.0e-24 116.7 128 46.9
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 5.0e-24 116.7 125 50.4
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 6.6e-24 116.3 167 43.1
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 8.6e-24 115.9 135 47.4
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 8.6e-24 115.9 135 47.4
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 8.6e-24 115.9 125 48.8
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 1.1e-23 115.5 125 46.4
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 1.5e-23 115.2 202 38.6
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 1.9e-23 114.8 148 43.2
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.9e-23 114.8 133 46.6
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.9e-23 114.8 133 47.4
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 2.5e-23 114.4 133 46.6
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.3e-23 114.0 167 40.7
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 4.3e-23 113.6 148 43.9
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 4.3e-23 113.6 215 36.3
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 4.3e-23 113.6 140 45.0
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 9.5e-23 112.5 140 44.3
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 9.5e-23 112.5 150 42.7
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.2e-22 112.1 169 41.4
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 1.2e-22 112.1 129 46.5
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.6e-22 111.7 121 46.3
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.6e-22 111.7 133 43.6
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 1.6e-22 111.7 149 43.6
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.8e-22 110.9 134 44.8
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 2.8e-22 110.9 150 43.3
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 6.2e-22 109.8 150 41.3
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 6.2e-22 109.8 126 46.0
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 6.2e-22 109.8 202 37.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 8.0e-22 109.4 147 42.9
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 8.0e-22 109.4 135 45.9
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 8.0e-22 109.4 134 44.8
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 8.0e-22 109.4 154 43.5
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 1.4e-21 108.6 124 46.8
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 1.4e-21 108.6 124 46.8
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 1.4e-21 108.6 201 36.8
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 1.8e-21 108.2 138 43.5
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.8e-21 108.2 152 42.8
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.3e-21 107.8 166 37.3
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 3.1e-21 107.5 133 46.6
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 4.0e-21 107.1 150 42.0
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 1.2e-20 105.5 179 36.3
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 2.0e-20 104.8 152 40.8
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.0e-20 104.8 134 44.0
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 4.4e-20 103.6 147 39.5
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 5.8e-20 103.2 113 45.1
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 9.8e-20 102.4 165 38.2
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.7e-19 101.7 123 43.9
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 2.2e-19 101.3 123 43.9
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 3.7e-19 100.5 146 41.8
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 6.4e-19 99.8 123 44.7
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 6.4e-19 99.8 123 44.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 8.3e-19 99.4 123 43.1
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 8.3e-19 99.4 123 43.9
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 8.3e-19 99.4 123 43.1
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 1.1e-18 99.0 123 43.9
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 1.4e-18 98.6 109 47.7
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 1.4e-18 98.6 117 45.3
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.4e-18 98.6 125 44.0
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 2.4e-18 97.8 124 43.5
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.4e-18 97.8 123 41.5
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 7.0e-18 96.3 181 35.4
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.2e-17 95.5 153 41.2
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.6e-17 95.1 123 43.1
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 1.6e-17 95.1 123 43.1
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 2.7e-17 94.4 137 40.9
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 1.7e-16 91.7 142 38.7
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 2.5e-15 87.8 152 37.5
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 3.6e-14 84.0 132 40.2
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 4.0e-13 80.5 123 39.0
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 2.6e-12 77.8 115 41.7
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.3e-11 75.5 174 32.2
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 2.5e-07 61.2 71 43.7


User provided reference genes

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