Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 0.0e+00 1625.1 1038 100.0
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 5.7e-09 67.8 78 47.4
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.3e-08 66.6 78 47.4
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 2.8e-08 65.5 80 42.5
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 3.7e-08 65.1 76 43.4
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 6.3e-08 64.3 80 41.2
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 6.3e-08 64.3 78 46.2
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 8.2e-08 63.9 78 46.2
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 8.2e-08 63.9 80 42.5
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 8.2e-08 63.9 82 42.7
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 8.2e-08 63.9 82 42.7
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.1e-07 63.5 73 42.5
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 1.1e-07 63.5 80 41.2
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 1.4e-07 63.2 104 36.5
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.4e-07 63.2 88 42.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 1.4e-07 63.2 78 42.3
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.8e-07 62.8 76 40.8
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.8e-07 62.8 80 40.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.8e-07 62.8 80 38.8
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.1e-07 62.0 80 41.2
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 4.1e-07 61.6 102 30.4
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 4.1e-07 61.6 76 39.5
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 4.1e-07 61.6 73 39.7
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 5.3e-07 61.2 80 38.8
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 5.3e-07 61.2 112 36.6
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.9e-07 60.8 77 40.3
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 9.0e-07 60.5 102 30.4
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 1.2e-06 60.1 77 40.3
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.2e-06 60.1 76 38.2
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.2e-06 60.1 77 42.9
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 1.5e-06 59.7 80 42.5
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.5e-06 59.7 88 39.8
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.5e-06 59.7 86 39.5
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 2.0e-06 59.3 53 49.1
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.6e-06 58.9 88 38.6
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 2.6e-06 58.9 81 39.5
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 2.6e-06 58.9 77 40.3
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-06 58.9 77 40.3
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-06 58.9 77 40.3
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 2.6e-06 58.9 80 38.8
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.6e-06 58.9 88 38.6
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.6e-06 58.9 76 36.8
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.4e-06 58.5 87 35.6
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.4e-06 58.5 77 40.3
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 4.5e-06 58.2 73 37.0
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 4.5e-06 58.2 75 37.3
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 5.9e-06 57.8 100 34.0
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 5.9e-06 57.8 86 39.5
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 5.9e-06 57.8 76 40.8
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 5.9e-06 57.8 76 35.5
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 7.7e-06 57.4 76 42.1


User provided reference genes

Program Settings