Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g17143 Chara braunii HOM05D004502 ORTHO05D005579 1.8e-119 432.6 214 100.0
Mapoly0035s0107 Marchantia polymorpha HOM05D004502 ORTHO05D005579 9.2e-15 84.7 127 40.2
CAN.G78.100 Capsicum annuum HOM05D004502 ORTHO05D005579 5.6e-12 75.5 128 31.2
Pp3c10_11170 Physcomitrium patens HOM05D004502 ORTHO05D005579 5.6e-12 75.5 134 37.3
Sopen01g038640 Solanum pennellii HOM05D004502 ORTHO05D005579 9.6e-12 74.7 128 29.7
ATR0680G297 Amborella trichopoda HOM05D004502 ORTHO05D005579 1.2e-11 74.3 163 29.4
Solyc01g094860.4 Solanum lycopersicum HOM05D004502 ORTHO05D005579 1.6e-11 73.9 128 29.7
Peaxi162Scf00020g01028 Petunia axillaris HOM05D004502 ORTHO05D005579 4.7e-11 72.4 128 30.5
Rhsim01G0146800 Rhododendron simsii HOM05D004502 ORTHO05D005579 4.7e-11 72.4 131 31.3
SHI13432 Sapria himalayana HOM05D004502 ORTHO05D005579 4.7e-11 72.4 135 31.9
PGSC0003DMG400000181 Solanum tuberosum HOM05D004502 ORTHO05D005579 4.7e-11 72.4 128 29.7
DCAR_008618 Daucus carota HOM05D004502 ORTHO05D005579 1.1e-10 71.2 133 32.3
QL12p032431 Quercus lobata HOM05D004502 ORTHO05D005579 1.4e-10 70.9 126 31.0
Nitab4.5_0010258g0020 Nicotiana tabacum HOM05D004502 ORTHO05D005579 1.8e-10 70.5 128 29.7
Zm00001eb222430 Zea mays HOM05D004502 ORTHO05D005579 2.4e-10 70.1 143 28.7
CSS0020518 Camellia sinensis var. sinensis HOM05D004502 ORTHO05D005579 3.1e-10 69.7 131 29.0
Migut.B01778 Erythranthe guttata HOM05D004502 ORTHO05D005579 3.1e-10 69.7 152 28.9
ECA236G0795 Erigeron canadensis HOM05D004502 ORTHO05D005579 5.2e-10 68.9 128 31.2
Rhsim07G0013000 Rhododendron simsii HOM05D004502 ORTHO05D005579 5.2e-10 68.9 131 30.5
GSVIVG01027000001 Vitis vinifera HOM05D004502 ORTHO05D005579 5.2e-10 68.9 127 30.7
Lsat_1_v5_gn_4_34660 Lactuca sativa HOM05D004502 ORTHO05D005579 8.9e-10 68.2 128 29.7
Nitab4.5_0000583g0350 Nicotiana tabacum HOM05D004502 ORTHO05D005579 8.9e-10 68.2 128 30.5
TWI23G1305 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 8.9e-10 68.2 135 29.6
Actinidia20888 Actinidia chinensis HOM05D004502 ORTHO05D005579 1.5e-09 67.4 131 29.8
Oeu052960.2 Olea europaea HOM05D004502 ORTHO05D005579 2.0e-09 67.0 126 29.4
Sabra14G0063300 Salix brachista HOM05D004502 ORTHO05D005579 2.0e-09 67.0 131 31.3
HPP92_022633 Vanilla planifolia HOM05D004502 ORTHO05D005579 2.0e-09 67.0 140 32.9
Cc02_g38300 Coffea canephora HOM05D004502 ORTHO05D005579 2.6e-09 66.6 127 30.7
COL.COLO4_12736 Corchorus olitorius HOM05D004502 ORTHO05D005579 2.6e-09 66.6 135 31.1
Cpa.g.sc11.33 Carica papaya HOM05D004502 ORTHO05D005579 3.4e-09 66.2 165 26.7
AUR62004387 Chenopodium quinoa HOM05D004502 ORTHO05D005579 3.4e-09 66.2 132 29.5
Actinidia14191 Actinidia chinensis HOM05D004502 ORTHO05D005579 4.4e-09 65.9 131 29.8
Ciclev10018851m.g Citrus clementina HOM05D004502 ORTHO05D005579 4.4e-09 65.9 132 30.3
Potri.014G087300 Populus trichocarpa HOM05D004502 ORTHO05D005579 4.4e-09 65.9 131 30.5
QL04p054124 Quercus lobata HOM05D004502 ORTHO05D005579 4.4e-09 65.9 168 26.8
Sed0014632 Sechium edule HOM05D004502 ORTHO05D005579 5.8e-09 65.5 175 28.0
THA.LOC104802040 Tarenaya hassleriana HOM05D004502 ORTHO05D005579 7.6e-09 65.1 166 26.5
MBI18_g32047_MAGBIO Magnolia biondii HOM05D004502 ORTHO05D005579 9.9e-09 64.7 210 24.3
PGR042G2088 Punica granatum HOM05D004502 ORTHO05D005579 9.9e-09 64.7 127 29.9
SalBow3G3684 Salvia bowleyana HOM05D004502 ORTHO05D005579 9.9e-09 64.7 128 28.9
Nn1g01586 Nelumbo nucifera HOM05D004502 ORTHO05D005579 1.3e-08 64.3 169 28.4
Phvul.010G100800 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 1.3e-08 64.3 181 28.7
VMungo0331G1775 Vigna mungo HOM05D004502 ORTHO05D005579 1.3e-08 64.3 181 27.6
Glyma.16G034551 Glycine max HOM05D004502 ORTHO05D005579 1.7e-08 63.9 176 28.4
Duzib133G0971 Durio zibethinus HOM05D004502 ORTHO05D005579 2.2e-08 63.5 161 26.7
FvH4_7g14850 Fragaria vesca HOM05D004502 ORTHO05D005579 2.2e-08 63.5 146 29.5
FAN01G2073 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.2e-08 63.5 139 28.8
Glyma.07G068700 Glycine max HOM05D004502 ORTHO05D005579 2.9e-08 63.2 176 27.3
Gorai.007G101400 Gossypium raimondii HOM05D004502 ORTHO05D005579 2.9e-08 63.2 150 29.3
SGA_v2.0_scaffold95G28821 Striga asiatica HOM05D004502 ORTHO05D005579 2.9e-08 63.2 131 27.5
AT2G46060 Arabidopsis thaliana HOM05D004502 ORTHO05D005579 3.8e-08 62.8 129 28.7
Haze_15535 Corylus avellana HOM05D004502 ORTHO05D005579 3.8e-08 62.8 168 26.8
ECA234G4483 Erigeron canadensis HOM05D004502 ORTHO05D005579 3.8e-08 62.8 128 27.3
FAN10G2351 Fragaria x ananassa HOM05D004502 ORTHO05D005579 3.8e-08 62.8 146 29.5
FAN10G2492 Fragaria x ananassa HOM05D004502 ORTHO05D005579 3.8e-08 62.8 146 29.5
Gohir.D11G095000 Gossypium hirsutum HOM05D004502 ORTHO05D005579 3.8e-08 62.8 150 30.7
Manes.01G254800 Manihot esculenta HOM05D004502 ORTHO05D005579 3.8e-08 62.8 126 30.2
Nn6g33342 Nelumbo nucifera HOM05D004502 ORTHO05D005579 3.8e-08 62.8 141 29.1
Os10g0446200 Oryza sativa ssp. japonica HOM05D004502 ORTHO05D005579 3.8e-08 62.8 148 29.7
MELO3C021198.2 Cucumis melo HOM05D004502 ORTHO05D005579 4.9e-08 62.4 191 25.7
vmacro20916 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 4.9e-08 62.4 131 30.5
C04p72070 Brassica napus HOM05D004502 ORTHO05D005579 6.4e-08 62.0 126 28.6
FAN03G0719 Fragaria x ananassa HOM05D004502 ORTHO05D005579 6.4e-08 62.0 146 28.8
Gorai.004G159100 Gossypium raimondii HOM05D004502 ORTHO05D005579 6.4e-08 62.0 167 25.1
Atru.chr5.526 Acer truncatum HOM05D004502 ORTHO05D005579 8.4e-08 61.6 172 25.6
Lj3g0021790 Lotus japonicus HOM05D004502 ORTHO05D005579 8.4e-08 61.6 136 29.4
Psat3g107400 Pisum sativum HOM05D004502 ORTHO05D005579 8.4e-08 61.6 166 25.9
Hund16660 Selenicereus undatus HOM05D004502 ORTHO05D005579 8.4e-08 61.6 167 26.9
unitig_26.g9298 Utricularia gibba HOM05D004502 ORTHO05D005579 8.4e-08 61.6 130 26.2
Aa31LG1G27460 Aethionema arabicum HOM05D004502 ORTHO05D005579 1.1e-07 61.2 128 27.3
AL4G45280 Arabidopsis lyrata HOM05D004502 ORTHO05D005579 1.1e-07 61.2 129 27.9
CiPaw.01G063800 Carya illinoinensis HOM05D004502 ORTHO05D005579 1.1e-07 61.2 168 27.4
Hma1.2p1_0071F.1_g037745 Hydrangea macrophylla HOM05D004502 ORTHO05D005579 1.1e-07 61.2 131 26.7
TWI60G0172 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 1.1e-07 61.2 139 28.1
Carub.0004s2875 Capsella rubella HOM05D004502 ORTHO05D005579 1.4e-07 60.8 129 27.1
Thhalv10001314m.g Eutrema salsugineum HOM05D004502 ORTHO05D005579 1.4e-07 60.8 128 28.1
FAN06G0667 Fragaria x ananassa HOM05D004502 ORTHO05D005579 1.4e-07 60.8 146 28.8
Gohir.A08G131800 Gossypium hirsutum HOM05D004502 ORTHO05D005579 1.4e-07 60.8 167 25.1
HanXRQChr06g0170231 Helianthus annuus HOM05D004502 ORTHO05D005579 1.4e-07 60.8 128 28.9
Lj9C585G14 Lonicera japonica HOM05D004502 ORTHO05D005579 1.4e-07 60.8 164 25.6
Sed0001889 Sechium edule HOM05D004502 ORTHO05D005579 1.4e-07 60.8 168 26.2
TAR629G1389 Trochodendron aralioides HOM05D004502 ORTHO05D005579 1.4e-07 60.8 153 28.8
CARHR141310 Cardamine hirsuta HOM05D004502 ORTHO05D005579 1.9e-07 60.5 128 27.3
Cfa003897 Carpinus fangiana HOM05D004502 ORTHO05D005579 1.9e-07 60.5 168 26.2
Eucgr.E00113 Eucalyptus grandis HOM05D004502 ORTHO05D005579 1.9e-07 60.5 133 29.3
HanXRQChr17g0562371 Helianthus annuus HOM05D004502 ORTHO05D005579 1.9e-07 60.5 128 25.0
PSO478G3176 Papaver somniferum HOM05D004502 ORTHO05D005579 1.9e-07 60.5 131 30.5
PSO782G3525 Papaver somniferum HOM05D004502 ORTHO05D005579 1.9e-07 60.5 131 30.5
A04p34250 Brassica napus HOM05D004502 ORTHO05D005579 2.4e-07 60.1 126 27.8
BraA04t18886Z Brassica rapa HOM05D004502 ORTHO05D005579 2.4e-07 60.1 126 27.8
CsaV3_6G000710 Cucumis sativus L. HOM05D004502 ORTHO05D005579 3.2e-07 59.7 201 25.9
Glyma.18G235400 Glycine max HOM05D004502 ORTHO05D005579 3.2e-07 59.7 168 26.8
Medtr8g028875 Medicago truncatula HOM05D004502 ORTHO05D005579 3.2e-07 59.7 136 27.9
Thecc.01G356300 Theobroma cacao HOM05D004502 ORTHO05D005579 3.2e-07 59.7 145 28.3
TPR.G37813 Trifolium pratense HOM05D004502 ORTHO05D005579 4.2e-07 59.3 165 26.1
Sc01g0003530 Simmondsia chinensis HOM05D004502 ORTHO05D005579 5.4e-07 58.9 201 26.4
arahy.Tifrunner.gnm1.ann1.04AGHE Arachis hypogaea HOM05D004502 ORTHO05D005579 7.1e-07 58.5 133 28.6
arahy.Tifrunner.gnm1.ann1.C1BLFK Arachis hypogaea HOM05D004502 ORTHO05D005579 7.1e-07 58.5 133 28.6
AUR62010714 Chenopodium quinoa HOM05D004502 ORTHO05D005579 7.1e-07 58.5 105 35.2
Glyma.09G257000 Glycine max HOM05D004502 ORTHO05D005579 9.3e-07 58.2 169 24.9
ClCG06G003550 Citrullus lanatus HOM05D004502 ORTHO05D005579 1.6e-06 57.4 128 28.9
arahy.Tifrunner.gnm1.ann1.0GN1Z3 Arachis hypogaea HOM05D004502 ORTHO05D005579 2.1e-06 57.0 136 27.9
arahy.Tifrunner.gnm1.ann1.V8X9PU Arachis hypogaea HOM05D004502 ORTHO05D005579 2.1e-06 57.0 136 27.9
Lalb_Chr17g0339421 Lupinus albus HOM05D004502 ORTHO05D005579 4.6e-06 55.8 153 25.5
MD07G1133800 Malus domestica HOM05D004502 ORTHO05D005579 6.0e-06 55.5 127 26.8


User provided reference genes

Program Settings