Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.5e-95 352.8 177 100.0
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 7.6e-31 137.9 135 45.2
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.7e-30 136.7 134 47.0
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 2.9e-30 136.0 134 43.3
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 2.9e-30 136.0 130 48.5
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 6.4e-30 134.8 130 46.9
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 8.4e-30 134.4 137 41.6
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 1.9e-29 133.3 132 45.5
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.9e-29 133.3 129 46.5
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.9e-29 133.3 130 46.9
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 2.4e-29 132.9 134 44.8
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 2.4e-29 132.9 130 45.4
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.4e-29 132.9 133 44.4
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.2e-29 132.5 138 42.0
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 3.2e-29 132.5 138 42.0
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 3.2e-29 132.5 130 46.9
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 5.4e-29 131.7 134 44.8
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 5.4e-29 131.7 131 45.0
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 5.4e-29 131.7 140 43.6
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 9.3e-29 131.0 138 41.3
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 9.3e-29 131.0 138 44.2
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.6e-28 130.2 129 44.2
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 2.7e-28 129.4 129 44.2
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 3.5e-28 129.0 134 44.0
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.5e-28 129.0 133 44.4
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 3.5e-28 129.0 136 42.6
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 4.6e-28 128.6 138 42.0
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.6e-28 128.6 123 48.0
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 6.0e-28 128.3 134 43.3
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.9e-28 127.9 134 43.3
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 7.9e-28 127.9 136 42.6
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.3e-27 127.1 138 42.0
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.3e-27 127.1 142 41.5
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.8e-27 126.7 138 39.9
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.8e-27 126.7 135 41.5
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.8e-27 126.7 142 38.7
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 2.3e-27 126.3 134 43.3
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 2.3e-27 126.3 134 44.0
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 3.0e-27 125.9 135 43.0
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 3.9e-27 125.6 139 39.6
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.9e-27 125.6 130 45.4
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 5.1e-27 125.2 130 43.8
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 5.1e-27 125.2 134 42.5
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 5.1e-27 125.2 131 41.2
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 6.7e-27 124.8 134 41.8
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 6.7e-27 124.8 129 43.4
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.1e-26 124.0 141 41.8
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.5e-26 123.6 130 42.3
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.5e-26 123.6 134 44.8
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.5e-26 123.6 130 45.4
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.5e-26 123.6 135 42.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.5e-26 123.6 130 43.8
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.9e-26 123.2 135 40.7
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 1.9e-26 123.2 130 43.8
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.9e-26 123.2 133 45.9
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.9e-26 123.2 135 41.5
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.9e-26 123.2 135 40.7
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.9e-26 123.2 135 43.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.5e-26 122.9 148 41.2
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 2.5e-26 122.9 134 41.0
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 2.5e-26 122.9 132 43.2
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 2.5e-26 122.9 134 41.0
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.5e-26 122.9 135 42.2
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 2.5e-26 122.9 134 41.8
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 3.3e-26 122.5 134 43.3
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 4.3e-26 122.1 148 39.9
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 5.6e-26 121.7 130 43.1
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 5.6e-26 121.7 120 45.8
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 5.6e-26 121.7 130 43.8
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 5.6e-26 121.7 136 42.6
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 5.6e-26 121.7 138 39.9
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.6e-26 121.7 135 40.7
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 9.6e-26 120.9 130 43.8
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 1.3e-25 120.6 130 42.3
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-25 120.6 131 43.5
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.3e-25 120.6 131 42.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 1.3e-25 120.6 118 54.2
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.3e-25 120.6 130 44.6
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.3e-25 120.6 134 42.5
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.3e-25 120.6 134 43.3
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.6e-25 120.2 131 43.5
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.1e-25 119.8 130 42.3
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 2.1e-25 119.8 142 43.0
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 2.8e-25 119.4 131 42.7
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.8e-25 119.4 131 42.7
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 2.8e-25 119.4 142 35.9
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 2.8e-25 119.4 129 44.2
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 3.7e-25 119.0 130 46.9
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 4.8e-25 118.6 131 44.3
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 6.2e-25 118.2 130 41.5
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 6.2e-25 118.2 133 40.6
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.4e-24 117.1 130 41.5
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.8e-24 116.7 138 40.6
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 2.4e-24 116.3 131 41.2
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 3.1e-24 115.9 142 45.1
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.3e-24 115.2 138 39.9
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 9.0e-24 114.4 134 38.8
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 9.0e-24 114.4 128 44.5
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 9.0e-24 114.4 164 36.6
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 1.2e-23 114.0 134 43.3
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.5e-23 113.6 130 41.5
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 2.0e-23 113.2 141 42.6
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 2.6e-23 112.8 137 34.3
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.6e-23 111.3 130 40.0
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.0e-22 110.9 134 41.8
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 4.9e-22 108.6 111 46.8
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 5.5e-21 105.1 133 36.8
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 7.1e-21 104.8 146 39.7
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.0e-19 100.9 125 41.6
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 3.0e-19 99.4 100 46.0
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 5.1e-19 98.6 190 35.3
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.1e-19 98.6 98 51.0
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 4.3e-18 95.5 154 33.1
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.7e-17 92.4 153 37.3
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 6.2e-17 91.7 87 44.8
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 8.2e-17 91.3 87 43.7
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 1.1e-16 90.9 96 43.8
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.1e-16 90.9 91 42.9
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.1e-16 90.9 131 34.4
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 7.6e-15 84.7 138 37.7
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.0e-14 84.3 94 45.7
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.1e-13 80.9 72 50.0
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 1.9e-13 80.1 88 45.5
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 4.3e-10 68.9 65 43.1
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 9.7e-10 67.8 65 41.5
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 4.1e-08 62.4 65 41.5


User provided reference genes

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