Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 3.1e-119 431.8 215 100.0
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 6.6e-53 211.5 188 56.9
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 2.1e-51 206.5 190 56.8
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.4e-50 203.8 197 53.8
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 2.3e-50 203.0 199 50.8
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 2.3e-50 203.0 192 54.2
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 8.9e-50 201.1 195 52.8
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 4.4e-49 198.7 189 55.0
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 4.4e-49 198.7 195 52.3
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 5.8e-49 198.4 196 50.0
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 5.8e-49 198.4 196 50.5
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.3e-48 197.2 197 50.8
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.3e-48 197.2 197 51.3
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.7e-48 196.8 201 50.2
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 4.9e-48 195.3 197 51.3
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 4.9e-48 195.3 197 50.8
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 8.3e-48 194.5 197 52.8
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 3.2e-47 192.6 196 50.5
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 4.1e-47 192.2 195 49.7
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 5.4e-47 191.8 209 48.8
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.2e-46 190.7 195 49.7
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 1.2e-46 190.7 196 52.6
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.2e-46 190.7 196 50.0
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.6e-46 190.3 192 51.0
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.6e-46 190.3 197 50.3
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 2.0e-46 189.9 197 50.3
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 2.7e-46 189.5 197 51.3
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 2.7e-46 189.5 196 50.5
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 3.5e-46 189.1 204 49.0
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 6.0e-46 188.3 198 48.5
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 6.0e-46 188.3 195 49.7
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 6.0e-46 188.3 197 50.3
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.3e-45 187.2 205 49.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.3e-45 186.4 197 49.2
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 2.3e-45 186.4 197 49.7
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 2.3e-45 186.4 196 50.0
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 3.0e-45 186.0 196 49.0
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 3.0e-45 186.0 196 49.0
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 3.0e-45 186.0 195 47.7
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 3.9e-45 185.7 198 49.5
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 8.6e-45 184.5 195 49.2
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 8.6e-45 184.5 183 51.9
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 8.6e-45 184.5 198 50.0
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.9e-44 183.3 184 51.1
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 1.9e-44 183.3 201 48.3
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 2.5e-44 183.0 201 48.3
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 2.5e-44 183.0 197 48.7
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 2.5e-44 183.0 197 49.2
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 2.5e-44 183.0 198 49.5
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 3.3e-44 182.6 199 48.7
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 3.3e-44 182.6 190 48.9
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 3.3e-44 182.6 195 48.2
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 4.3e-44 182.2 196 48.5
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 4.3e-44 182.2 198 49.0
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 5.6e-44 181.8 197 48.7
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 7.3e-44 181.4 195 49.7
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 1.2e-43 180.6 195 48.7
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 1.2e-43 180.6 207 47.8
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 1.6e-43 180.3 196 47.4
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 2.8e-43 179.5 188 49.5
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 3.6e-43 179.1 196 49.5
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 3.6e-43 179.1 198 49.0
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 3.6e-43 179.1 195 47.7
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 1.1e-42 177.6 201 47.8
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 1.4e-42 177.2 205 46.3
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 2.3e-42 176.4 196 49.0
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 2.3e-42 176.4 204 49.0
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 5.2e-42 175.3 198 47.5
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 5.2e-42 175.3 195 46.7
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 5.2e-42 175.3 194 47.9
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 5.2e-42 175.3 194 48.5
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 5.2e-42 175.3 203 45.8
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 8.9e-42 174.5 185 50.3
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 8.9e-42 174.5 198 48.5
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 8.9e-42 174.5 200 48.5
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 1.2e-41 174.1 198 47.5
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 1.2e-41 174.1 190 48.4
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 1.5e-41 173.7 198 47.0
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 2.6e-41 172.9 198 47.5
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 2.6e-41 172.9 198 47.5
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 2.6e-41 172.9 173 51.4
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 3.4e-41 172.6 197 48.2
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 3.4e-41 172.6 173 50.9
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 3.4e-41 172.6 193 49.2
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 7.5e-41 171.4 199 47.7
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 1.7e-40 170.2 196 46.4
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 2.2e-40 169.9 196 48.5
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 2.4e-39 166.4 194 47.4
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 7.1e-39 164.9 196 44.4
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 9.5e-36 154.5 181 46.4
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 7.6e-33 144.8 172 45.9
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 1.9e-31 140.2 161 47.2
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 6.0e-30 135.2 194 39.2
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.9e-29 132.5 157 46.5
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 1.2e-27 127.5 105 64.8
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 7.6e-25 118.2 192 37.0
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 2.3e-21 106.7 87 62.1
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.5e-20 104.0 90 61.1
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 4.8e-19 99.0 120 46.7
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 4.5e-17 92.4 115 41.7
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 4.2e-15 85.9 87 52.9
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 9.3e-15 84.7 127 39.4
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.4e-10 70.9 104 40.4
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 3.1e-10 69.7 53 62.3
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 5.3e-10 68.9 172 29.1
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 5.3e-10 68.9 172 29.1
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 3.4e-09 66.2 188 25.5
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 2.2e-08 63.5 109 35.8
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 1.4e-07 60.8 176 27.3
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 2.1e-06 57.0 152 26.3


User provided reference genes

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