Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.2e-131 473.4 279 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 6.8e-34 148.7 155 52.9
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 3.4e-33 146.4 111 61.3
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 5.7e-33 145.6 117 56.4
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 9.8e-33 144.8 111 60.4
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 9.8e-33 144.8 125 58.4
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 9.8e-33 144.8 108 62.0
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.3e-32 144.4 108 63.0
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 2.9e-32 143.3 154 50.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 3.7e-32 142.9 110 61.8
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 4.9e-32 142.5 108 61.1
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 6.4e-32 142.1 111 62.2
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 6.4e-32 142.1 111 62.2
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 6.4e-32 142.1 111 62.2
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 6.4e-32 142.1 111 58.6
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 8.3e-32 141.7 111 60.4
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 8.3e-32 141.7 111 62.2
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 8.3e-32 141.7 136 55.9
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.1e-31 141.4 111 61.3
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.1e-31 141.4 112 60.7
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.1e-31 141.4 112 60.7
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.1e-31 141.4 129 56.6
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.4e-31 141.0 111 59.5
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.4e-31 141.0 162 49.4
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.8e-31 140.6 111 57.7
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.8e-31 140.6 111 59.5
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.8e-31 140.6 111 59.5
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.8e-31 140.6 154 48.7
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.8e-31 140.6 152 49.3
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 1.8e-31 140.6 118 58.5
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 2.4e-31 140.2 112 59.8
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 2.4e-31 140.2 112 59.8
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.4e-31 140.2 111 59.5
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 2.4e-31 140.2 111 59.5
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 2.4e-31 140.2 111 60.4
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 2.4e-31 140.2 109 64.2
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 3.2e-31 139.8 111 58.6
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 3.2e-31 139.8 108 62.0
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 3.2e-31 139.8 126 56.3
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 4.1e-31 139.4 133 54.9
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 4.1e-31 139.4 109 58.7
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 5.4e-31 139.0 108 61.1
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 7.0e-31 138.7 167 45.5
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 7.0e-31 138.7 111 59.5
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 7.0e-31 138.7 111 59.5
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 7.0e-31 138.7 108 59.3
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 9.2e-31 138.3 108 59.3
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 9.2e-31 138.3 128 54.7
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 9.2e-31 138.3 108 59.3
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 1.2e-30 137.9 111 59.5
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 1.2e-30 137.9 111 59.5
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 1.2e-30 137.9 111 59.5
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.6e-30 137.5 119 54.6
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.6e-30 137.5 108 60.2
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 2.0e-30 137.1 167 44.9
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 2.0e-30 137.1 111 58.6
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 2.0e-30 137.1 125 55.2
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.0e-30 137.1 149 50.3
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.0e-30 137.1 125 56.0
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.7e-30 136.7 111 58.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 2.7e-30 136.7 128 55.5
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 2.7e-30 136.7 111 57.7
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 2.7e-30 136.7 108 57.4
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 2.7e-30 136.7 111 58.6
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 2.7e-30 136.7 108 57.4
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 2.7e-30 136.7 119 58.8
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 3.5e-30 136.3 120 55.0
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 3.5e-30 136.3 111 58.6
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 4.6e-30 136.0 111 56.8
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 4.6e-30 136.0 111 55.9
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 5.9e-30 135.6 129 55.0
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.8e-30 135.2 138 50.7
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 7.8e-30 135.2 129 53.5
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 7.8e-30 135.2 135 54.8
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.0e-29 134.8 108 61.1
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.3e-29 134.4 108 58.3
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.7e-29 134.0 111 57.7
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 2.3e-29 133.7 111 58.6
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 3.0e-29 133.3 111 55.9
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 3.0e-29 133.3 136 52.9
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 3.9e-29 132.9 108 58.3
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 5.0e-29 132.5 109 56.9
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 6.6e-29 132.1 139 47.5
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 6.6e-29 132.1 109 56.0
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 8.6e-29 131.7 108 56.5
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.1e-28 131.3 104 60.6
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.1e-28 131.3 132 53.0
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 1.5e-28 131.0 111 55.9
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.5e-28 131.0 129 53.5
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.5e-28 131.0 132 53.0
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 1.9e-28 130.6 111 55.9
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 2.5e-28 130.2 122 54.9
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.6e-27 127.5 143 48.3
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 4.7e-27 125.9 122 50.8
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 4.7e-27 125.9 122 50.8
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 1.1e-26 124.8 149 49.7
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 1.8e-26 124.0 123 49.6
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.8e-26 124.0 123 49.6
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.8e-26 124.0 125 53.6
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 2.3e-26 123.6 125 53.6
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.3e-26 123.6 125 53.6
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.3e-26 123.6 125 53.6
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.3e-26 123.6 125 53.6
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.0e-25 120.6 127 52.0
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.4e-25 119.4 157 45.9
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 7.5e-25 118.6 101 56.4
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.3e-24 117.9 87 63.2
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.3e-24 117.9 87 62.1
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 4.9e-24 115.9 118 49.2
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 8.3e-24 115.2 115 50.4
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 2.4e-23 113.6 109 56.0
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 9.2e-23 111.7 89 60.7
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 9.2e-23 111.7 131 47.3
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.2e-22 111.3 89 58.4
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 7.8e-22 108.6 90 56.7
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.7e-21 107.5 93 58.1
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 3.0e-21 106.7 113 51.3
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 7.3e-20 102.1 89 55.1
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.6e-19 100.9 105 53.3
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.2e-14 84.7 98 48.0
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.1e-10 71.6 56 58.9
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.4e-09 66.2 52 51.9
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.5e-06 56.6 38 60.5


User provided reference genes

Program Settings