Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g16825 Chara braunii HOM05D018838 ORTHO05D006034 0.0e+00 2289.6 1174 100.0
CBR_g29774 Chara braunii HOM05D004995 ORTHO05D006034 2.1e-129 468.0 1032 37.5
CBR_g507 Chara braunii HOM05D018838 ORTHO05D003171 2.8e-129 467.6 303 82.2
CBR_g45592 Chara braunii HOM05D018838 ORTHO05D134361 6.3e-89 333.6 307 66.8
CBR_g846 Chara braunii HOM05D018838 ORTHO05D135786 1.0e-54 219.9 180 71.1
CBR_g31898 Chara braunii HOM05D018838 ORTHO05D136638 2.1e-52 212.2 210 61.4
CBR_g8641 Chara braunii HOM05D018838 ORTHO05D132417 9.8e-50 203.4 155 75.5
CBR_g8588 Chara braunii HOM05D018838 ORTHO05D135783 8.6e-30 137.1 121 61.2
SMO367G0571 Selaginella moellendorffii HOM05D004995 ORTHO05D006034 4.7e-28 131.3 182 42.9
AagrBONN_evm.TU.Sc2ySwM_368.2357 Anthoceros agrestis HOM05D004995 ORTHO05D006034 6.2e-28 131.0 142 47.9
Aqoxy5G04290 Aquilegia oxysepala HOM05D004995 ORTHO05D006034 1.1e-27 130.2 180 41.1
Migut.D00092 Erythranthe guttata HOM05D004995 ORTHO05D006034 1.8e-27 129.4 143 45.5
CANSAT25G2589 Cannabis sativa HOM05D004995 ORTHO05D006034 5.2e-27 127.9 155 41.3
Actinidia25841 Actinidia chinensis HOM05D004995 ORTHO05D006034 1.5e-26 126.3 144 41.7
RcHm_v2.0_Chr7g0241761 Rosa chinensis HOM05D004995 ORTHO05D006034 2.0e-26 125.9 154 42.9
MELO3C015934.2 Cucumis melo HOM05D004995 ORTHO05D006034 2.6e-26 125.6 142 43.0
PSO170G6821 Papaver somniferum HOM05D004995 ORTHO05D006034 2.6e-26 125.6 162 40.7
PSO357G0286 Papaver somniferum HOM05D004995 ORTHO05D006034 2.6e-26 125.6 141 42.6
Cfa005817 Carpinus fangiana HOM05D004995 ORTHO05D006034 3.4e-26 125.2 162 42.0
DCAR_012367 Daucus carota HOM05D004995 ORTHO05D006034 4.4e-26 124.8 174 39.1
Cpa.g.sc18.23 Carica papaya HOM05D004995 ORTHO05D006034 5.8e-26 124.4 140 42.9
vmacro15117 Vaccinium macrocarpon HOM05D004995 ORTHO05D006034 9.8e-26 123.6 143 42.0
Glyma.02G013500 Glycine max HOM05D004995 ORTHO05D006034 1.3e-25 123.2 143 42.0
Sed0026389 Sechium edule HOM05D004995 ORTHO05D006034 1.3e-25 123.2 142 43.0
Hund09619 Selenicereus undatus HOM05D004995 ORTHO05D006034 1.3e-25 123.2 143 43.4
PGSC0003DMG400009006 Solanum tuberosum HOM05D004995 ORTHO05D006034 1.3e-25 123.2 234 33.8
Glyma.10G014100 Glycine max HOM05D004995 ORTHO05D006034 1.7e-25 122.9 143 42.0
GSVIVG01028102001 Vitis vinifera HOM05D004995 ORTHO05D006034 1.7e-25 122.9 143 42.7
Ciclev10024590m.g Citrus clementina HOM05D004995 ORTHO05D006034 2.2e-25 122.5 140 42.1
COL.COLO4_23251 Corchorus olitorius HOM05D004995 ORTHO05D006034 2.2e-25 122.5 141 41.8
Mapoly0010s0152 Marchantia polymorpha HOM05D004995 ORTHO05D006034 2.9e-25 122.1 245 35.9
Sc24g0003210 Simmondsia chinensis HOM05D004995 ORTHO05D006034 2.9e-25 122.1 143 42.0
Carub.0006s3511 Capsella rubella HOM05D004995 ORTHO05D006034 3.7e-25 121.7 174 38.5
CsaV3_7G029870 Cucumis sativus L. HOM05D004995 ORTHO05D006034 3.7e-25 121.7 142 40.8
Lalb_Chr02g0146751 Lupinus albus HOM05D004995 ORTHO05D006034 3.7e-25 121.7 165 39.4
Thecc.01G311300 Theobroma cacao HOM05D004995 ORTHO05D006034 3.7e-25 121.7 142 40.1
CSS0012776 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.1e-24 120.2 256 33.2
MD11G1316200 Malus domestica HOM05D004995 ORTHO05D006034 1.1e-24 120.2 141 43.3
Actinidia21007 Actinidia chinensis HOM05D004995 ORTHO05D006034 1.4e-24 119.8 143 40.6
CSS0035665 Camellia sinensis var. sinensis HOM05D004995 ORTHO05D006034 1.4e-24 119.8 256 32.8
Lj5g0006877 Lotus japonicus HOM05D004995 ORTHO05D006034 1.4e-24 119.8 203 36.5
CDE09G0507 Ceratophyllum demersum HOM05D004995 ORTHO05D006034 2.4e-24 119.0 218 34.9
Psat6g162360 Pisum sativum HOM05D004995 ORTHO05D006034 2.4e-24 119.0 143 42.7
DCAR_005771 Daucus carota HOM05D004995 ORTHO05D006034 3.2e-24 118.6 201 34.8
Medtr1g087290 Medicago truncatula HOM05D004995 ORTHO05D006034 3.2e-24 118.6 196 36.2
ATR0706G147 Amborella trichopoda HOM05D004995 ORTHO05D006034 4.1e-24 118.2 141 39.7
SEGI_38340 Sequoiadendron giganteum HOM05D004995 ORTHO05D006034 4.1e-24 118.2 141 39.7
CBR_g50746 Chara braunii HOM05D000330 ORTHO05D000209 5.4e-24 117.9 173 43.4
FAN13G2181 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.2e-23 116.7 241 34.0
Nitab4.5_0013957g0010 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.2e-23 116.7 327 30.0
arahy.Tifrunner.gnm1.ann1.KJ11SU Arachis hypogaea HOM05D004995 ORTHO05D006034 2.1e-23 115.9 243 32.9
FAN04G1561 Fragaria x ananassa HOM05D004995 ORTHO05D006034 2.1e-23 115.9 241 34.0
Phvul.007G215300 Phaseolus vulgaris HOM05D004995 ORTHO05D006034 2.1e-23 115.9 264 33.3
Potri.002G197400 Populus trichocarpa HOM05D004995 ORTHO05D006034 2.7e-23 115.5 267 33.0
VMungo0720G1458 Vigna mungo HOM05D004995 ORTHO05D006034 2.7e-23 115.5 143 40.6
Duzib138G1673 Durio zibethinus HOM05D004995 ORTHO05D006034 3.5e-23 115.2 141 39.7
unitig_90.g27435 Utricularia gibba HOM05D004995 ORTHO05D006034 3.5e-23 115.2 220 34.1
Potri.014G122400 Populus trichocarpa HOM05D004995 ORTHO05D006034 7.8e-23 114.0 222 33.8
PGR044G2031 Punica granatum HOM05D004995 ORTHO05D006034 7.8e-23 114.0 269 32.3
FvH4_5g39450 Fragaria vesca HOM05D004995 ORTHO05D006034 1.0e-22 113.6 241 33.6
FAN18G1671 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.0e-22 113.6 241 33.6
Nn3g21651 Nelumbo nucifera HOM05D004995 ORTHO05D006034 2.3e-22 112.5 316 31.3
Dinv10081 Davidia involucrata HOM05D004995 ORTHO05D006034 3.0e-22 112.1 268 31.3
Os03g0304400 Oryza sativa ssp. japonica HOM05D004995 ORTHO05D006034 3.9e-22 111.7 179 35.2
BolC3t16092H Brassica oleracea HOM05D004995 ORTHO05D006034 6.6e-22 110.9 294 31.3
Lj1A19G23 Lonicera japonica HOM05D004995 ORTHO05D006034 6.6e-22 110.9 141 40.4
MBI18_g28452_MAGBIO Magnolia biondii HOM05D004995 ORTHO05D006034 6.6e-22 110.9 338 29.6
Sabra02G0160100 Salix brachista HOM05D004995 ORTHO05D006034 6.6e-22 110.9 266 30.8
BcaC01g06775 Brassica carinata HOM05D004995 ORTHO05D006034 8.6e-22 110.5 173 35.8
MD03G1296700 Malus domestica HOM05D004995 ORTHO05D006034 8.6e-22 110.5 271 32.1
BcaB01g02426 Brassica carinata HOM05D004995 ORTHO05D006034 1.5e-21 109.8 251 31.1
C03p38070 Brassica napus HOM05D004995 ORTHO05D006034 1.5e-21 109.8 294 31.3
TAR633G0044 Trochodendron aralioides HOM05D004995 ORTHO05D006034 1.5e-21 109.8 429 26.6
Nitab4.5_0006144g0040 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.9e-21 109.4 215 32.6
Peaxi162Scf00001g10213 Petunia axillaris HOM05D004995 ORTHO05D006034 1.9e-21 109.4 291 30.9
Peaxi162Scf00058g03010 Petunia axillaris HOM05D004995 ORTHO05D006034 2.5e-21 109.0 259 32.4
AT4G02110 Arabidopsis thaliana HOM05D004995 ORTHO05D006034 3.3e-21 108.6 297 30.0
AUR62011830 Chenopodium quinoa HOM05D004995 ORTHO05D006034 3.3e-21 108.6 325 28.0
SGA_v2.0_scaffold376G50269 Striga asiatica HOM05D004995 ORTHO05D006034 5.6e-21 107.8 382 27.2
Atru.chr5.1036 Acer truncatum HOM05D004995 ORTHO05D006034 7.3e-21 107.5 133 40.6
FAN08G3258 Fragaria x ananassa HOM05D004995 ORTHO05D006034 1.2e-20 106.7 310 31.3
Nitab4.5_0000363g0330 Nicotiana tabacum HOM05D004995 ORTHO05D006034 1.2e-20 106.7 238 32.4
Zm00001eb331400 Zea mays HOM05D004995 ORTHO05D006034 1.2e-20 106.7 205 34.1
TWI75G0138 Tripterygium wilfordii HOM05D004995 ORTHO05D006034 1.6e-20 106.3 273 31.5
Sabra14G0090800 Salix brachista HOM05D004995 ORTHO05D006034 2.8e-20 105.5 295 29.8
arahy.Tifrunner.gnm1.ann1.SI6M6S Arachis hypogaea HOM05D004995 ORTHO05D006034 3.6e-20 105.1 227 32.2
CiPaw.07G116000 Carya illinoinensis HOM05D004995 ORTHO05D006034 3.6e-20 105.1 292 29.8
A03p31220 Brassica napus HOM05D004995 ORTHO05D006034 8.1e-20 104.0 254 31.1
Lsat_1_v5_gn_8_165441 Lactuca sativa HOM05D004995 ORTHO05D006034 2.3e-19 102.4 258 32.2
ECA236G3500 Erigeron canadensis HOM05D004995 ORTHO05D006034 3.1e-19 102.1 311 28.0
CBR_g38986 Chara braunii HOM05D005350 ORTHO05D003171 5.2e-19 101.3 200 37.5
Sp6g02000 Schrenkiella parvula HOM05D004995 ORTHO05D006034 5.2e-19 101.3 303 28.7
Manes.01G226600 Manihot esculenta HOM05D004995 ORTHO05D006034 6.8e-19 100.9 283 29.3
Ca_10292_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 1.2e-18 100.1 300 29.0
Ca_30263_v3 Cicer arietinum L. HOM05D004995 ORTHO05D006034 1.2e-18 100.1 300 29.0
CBR_g29972 Chara braunii HOM05D005350 ORTHO05D137106 1.5e-18 99.8 180 39.4
THA.LOC104825943 Tarenaya hassleriana HOM05D004995 ORTHO05D006034 1.5e-18 99.8 430 25.3
Prupe.8G270500 Prunus persica HOM05D004995 ORTHO05D006034 2.0e-18 99.4 335 28.7
Gohir.A12G126200 Gossypium hirsutum HOM05D004995 ORTHO05D006034 2.6e-18 99.0 419 26.3
Cc02_g27310 Coffea canephora HOM05D004995 ORTHO05D006034 4.4e-18 98.2 335 28.4
CARHR250290 Cardamine hirsuta HOM05D004995 ORTHO05D006034 7.6e-18 97.4 570 26.5
QL12p020317 Quercus lobata HOM05D004995 ORTHO05D006034 7.6e-18 97.4 435 26.0
HanXRQChr06g0167831 Helianthus annuus HOM05D004995 ORTHO05D006034 1.7e-17 96.3 418 25.6
Zm00001eb014460 Zea mays HOM05D004995 ORTHO05D006034 2.2e-17 95.9 300 29.3
AL6G51110 Arabidopsis lyrata HOM05D004995 ORTHO05D006034 2.9e-17 95.5 461 26.2
CAN.G362.42 Capsicum annuum HOM05D004995 ORTHO05D006034 2.9e-17 95.5 535 26.2
CBR_g19486 Chara braunii HOM05D005350 ORTHO05D003171 4.9e-17 94.7 173 39.9
Gohir.D12G129700 Gossypium hirsutum HOM05D004995 ORTHO05D006034 1.4e-16 93.2 430 25.6
Rhsim01G0290000 Rhododendron simsii HOM05D004995 ORTHO05D006034 3.2e-16 92.0 530 26.4
EL10As5g23507 Beta vulgaris HOM05D004995 ORTHO05D006034 4.1e-16 91.7 488 25.4
Gorai.008G140900 Gossypium raimondii HOM05D004995 ORTHO05D006034 4.1e-16 91.7 445 24.3
Nitab4.5_0001301g0150 Nicotiana tabacum HOM05D004995 ORTHO05D006034 4.1e-16 91.7 485 26.8
Ah.11g049350 Amaranthus hybridus HOM05D004995 ORTHO05D006034 7.1e-16 90.9 327 28.4
CBR_g39870 Chara braunii HOM05D005350 ORTHO05D003171 7.1e-16 90.9 141 41.8
TPR.G19766 Trifolium pratense HOM05D004995 ORTHO05D006034 1.6e-15 89.7 151 37.1
CBR_g6418 Chara braunii HOM05D013885 ORTHO05D000184 3.5e-15 88.6 113 46.0
HanXRQChr15g0464181 Helianthus annuus HOM05D004995 ORTHO05D006034 7.8e-15 87.4 485 24.3
Oeu008461.1 Olea europaea HOM05D004995 ORTHO05D006034 7.8e-15 87.4 482 24.9
Dinv33107 Davidia involucrata HOM05D004995 ORTHO05D006034 2.3e-14 85.9 646 23.7
AUR62024673 Chenopodium quinoa HOM05D004995 ORTHO05D006034 3.9e-14 85.1 717 22.3
CAN.G1280.22 Capsicum annuum HOM05D004995 ORTHO05D006034 1.9e-13 82.8 551 24.3
CBR_g679 Chara braunii HOM05D013885 ORTHO05D132447 2.5e-13 82.4 91 51.6
Thhalv10028365m.g Eutrema salsugineum HOM05D004995 ORTHO05D006034 3.3e-13 82.0 468 25.2
Solyc06g009680.4 Solanum lycopersicum HOM05D004995 ORTHO05D006034 3.3e-13 82.0 556 24.8
CBR_g31028 Chara braunii HOM05D013885 ORTHO05D003171 9.6e-13 80.5 103 46.6
CBR_g18935 Chara braunii HOM05D000106 ORTHO05D017271 1.2e-12 80.1 162 36.4
Oeu047387.1 Olea europaea HOM05D004995 ORTHO05D006034 2.1e-12 79.3 634 22.4
BraA03t12302Z Brassica rapa HOM05D004995 ORTHO05D006034 4.7e-12 78.2 551 23.6
SHI20082 Sapria himalayana HOM05D004995 ORTHO05D006034 4.7e-12 78.2 77 48.1
Eucgr.K03537 Eucalyptus grandis HOM05D004995 ORTHO05D006034 1.1e-11 77.0 108 38.0
Sopen06g004320 Solanum pennellii HOM05D004995 ORTHO05D006034 5.2e-11 74.7 574 23.0
CBR_g49920 Chara braunii HOM05D005350 ORTHO05D135270 3.4e-10 72.0 88 46.6
CBR_g3045 Chara braunii HOM05D005350 ORTHO05D003171 4.4e-10 71.6 70 52.9
CBR_g19688 Chara braunii HOM05D005350 ORTHO05D003171 1.7e-09 69.7 106 42.5
CBR_g21304 Chara braunii HOM05D005350 ORTHO05D003171 4.2e-08 65.1 107 40.2
CBR_g51228 Chara braunii HOM05D005350 ORTHO05D008838 7.8e-07 60.8 83 43.4
CBR_g39284 Chara braunii HOM05D013885 ORTHO05D003171 5.1e-06 58.2 346 30.3


User provided reference genes

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