Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 6.5e-114 414.1 209 100.0
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 3.7e-61 238.8 228 55.3
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.7e-59 232.6 218 52.8
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 2.7e-59 232.6 218 54.6
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 6.6e-58 228.0 214 53.3
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 1.1e-57 227.3 200 58.0
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 3.3e-57 225.7 218 51.8
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 3.3e-57 225.7 218 54.1
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 4.3e-57 225.3 218 53.2
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 7.3e-57 224.6 218 52.8
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 9.5e-57 224.2 218 53.2
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 1.2e-56 223.8 220 52.7
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 1.2e-56 223.8 218 51.8
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 2.8e-56 222.6 218 52.8
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 2.8e-56 222.6 218 52.3
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 3.6e-56 222.2 218 51.4
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 3.6e-56 222.2 218 53.2
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 4.7e-56 221.9 227 52.9
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 6.2e-56 221.5 218 52.8
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 6.2e-56 221.5 218 52.3
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 8.1e-56 221.1 220 52.3
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 8.1e-56 221.1 214 52.3
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 8.1e-56 221.1 227 52.4
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 8.1e-56 221.1 218 52.3
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 1.4e-55 220.3 219 53.9
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 1.8e-55 219.9 217 52.5
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.8e-55 219.9 225 51.1
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 2.3e-55 219.5 218 51.4
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 2.3e-55 219.5 218 51.4
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 2.3e-55 219.5 218 51.8
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 2.3e-55 219.5 219 52.5
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 3.1e-55 219.2 218 52.3
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 3.1e-55 219.2 218 51.8
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 4.0e-55 218.8 218 52.3
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 5.2e-55 218.4 218 51.8
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 6.8e-55 218.0 218 51.4
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 6.8e-55 218.0 218 51.8
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 6.8e-55 218.0 218 51.8
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 8.9e-55 217.6 218 50.9
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 1.5e-54 216.9 222 51.4
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.5e-54 216.9 218 50.9
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 2.0e-54 216.5 217 50.2
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 2.0e-54 216.5 219 52.1
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 2.6e-54 216.1 219 51.1
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 2.6e-54 216.1 217 50.7
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 3.4e-54 215.7 218 50.5
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.4e-54 215.7 218 50.5
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 3.4e-54 215.7 218 51.8
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 3.4e-54 215.7 219 51.6
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 3.4e-54 215.7 218 51.8
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 4.4e-54 215.3 218 50.9
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 4.4e-54 215.3 212 51.9
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 5.8e-54 214.9 218 50.9
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 5.8e-54 214.9 219 51.6
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 7.5e-54 214.5 217 50.7
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 9.9e-54 214.2 218 50.9
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 9.9e-54 214.2 218 50.9
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.7e-53 213.4 174 56.9
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.7e-53 213.4 218 50.9
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.7e-53 213.4 218 50.9
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.7e-53 213.4 218 50.9
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 1.7e-53 213.4 219 50.7
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 2.2e-53 213.0 218 50.5
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 2.2e-53 213.0 218 50.0
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 2.9e-53 212.6 218 50.0
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 2.9e-53 212.6 218 50.5
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 3.7e-53 212.2 218 50.0
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 3.7e-53 212.2 200 54.5
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 4.9e-53 211.8 217 50.7
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 4.9e-53 211.8 217 50.2
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 4.9e-53 211.8 218 50.0
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 4.9e-53 211.8 217 51.2
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 4.9e-53 211.8 224 50.9
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 6.4e-53 211.5 218 50.5
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 6.4e-53 211.5 219 52.5
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 6.4e-53 211.5 218 49.1
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 6.4e-53 211.5 217 50.2
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 6.4e-53 211.5 218 50.0
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 8.3e-53 211.1 218 49.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 8.3e-53 211.1 217 50.7
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 8.3e-53 211.1 217 50.2
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 8.3e-53 211.1 218 49.5
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 1.1e-52 210.7 217 50.7
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.4e-52 209.5 218 48.2
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.4e-52 209.5 226 49.1
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 2.4e-52 209.5 218 50.0
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 3.2e-52 209.1 218 48.6
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 5.4e-52 208.4 218 50.5
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 5.4e-52 208.4 216 50.5
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 5.4e-52 208.4 218 50.9
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 5.4e-52 208.4 218 50.5
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 7.1e-52 208.0 218 49.1
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 7.1e-52 208.0 218 49.1
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.6e-51 206.8 222 50.5
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 2.1e-51 206.5 218 48.6
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 2.1e-51 206.5 218 50.0
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 2.1e-51 206.5 218 50.0
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 3.5e-51 205.7 218 48.6
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 4.6e-51 205.3 218 49.5
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 7.8e-51 204.5 218 48.6
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 7.8e-51 204.5 218 48.2
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 7.8e-51 204.5 218 48.6
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 7.8e-51 204.5 219 51.6
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 7.8e-51 204.5 218 47.2
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 1.3e-50 203.8 218 48.2
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 1.7e-50 203.4 218 49.5
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 3.9e-50 202.2 233 47.2
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 1.5e-49 200.3 226 46.0
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 1.9e-49 199.9 219 48.4
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.9e-49 199.9 219 48.4
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 4.3e-49 198.7 218 45.9
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 4.3e-49 198.7 219 48.4
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 7.3e-49 198.0 174 56.9
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 3.4e-46 189.1 244 43.0
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 3.4e-46 189.1 218 46.8
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 4.4e-46 188.7 173 55.5
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 4.4e-46 188.7 217 46.5
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 4.9e-45 185.3 222 45.5
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 6.4e-45 184.9 168 55.4
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.1e-44 184.1 301 37.2
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 1.9e-44 183.3 174 54.0
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 2.3e-42 176.4 177 50.8
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 3.9e-42 175.6 218 45.4
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 1.8e-39 166.8 311 35.4
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 2.4e-39 166.4 159 55.3
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 2.4e-39 166.4 218 43.1
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 3.1e-39 166.0 218 42.7
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 5.4e-36 155.2 161 52.8
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 5.1e-34 148.7 174 45.4
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 5.1e-26 122.1 219 36.5
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 8.7e-26 121.3 118 47.5
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 4.0e-23 112.5 157 34.4
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 7.4e-17 91.7 127 37.8
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 1.6e-11 73.9 85 45.9
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 2.1e-11 73.6 60 58.3


User provided reference genes

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