Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.0e-112 410.2 224 100.0
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 1.9e-39 166.8 115 67.8
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.4e-37 160.6 227 44.5
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.4e-37 160.6 110 67.3
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 2.4e-37 159.8 111 64.9
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 5.3e-37 158.7 110 66.4
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.5e-36 157.1 110 65.5
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 2.0e-36 156.8 169 50.9
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 2.0e-36 156.8 110 65.5
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 2.0e-36 156.8 110 64.5
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 2.0e-36 156.8 110 64.5
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 2.0e-36 156.8 110 64.5
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 4.5e-36 155.6 111 64.9
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 5.8e-36 155.2 111 63.1
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 5.8e-36 155.2 111 65.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 7.6e-36 154.8 110 63.6
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 9.9e-36 154.5 110 63.6
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 9.9e-36 154.5 110 63.6
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 9.9e-36 154.5 110 63.6
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.3e-35 154.1 110 64.5
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.3e-35 154.1 111 64.0
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.3e-35 154.1 111 64.0
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.3e-35 154.1 110 63.6
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 1.3e-35 154.1 111 63.1
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.7e-35 153.7 109 63.3
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 63.6
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 63.6
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 62.7
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 1.7e-35 153.7 140 54.3
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 62.7
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 1.7e-35 153.7 112 60.7
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.7e-35 153.7 112 60.7
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 62.7
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 64.5
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 63.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.7e-35 153.7 123 58.5
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.7e-35 153.7 110 62.7
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 1.7e-35 153.7 140 54.3
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.7e-35 153.7 115 60.9
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 1.7e-35 153.7 115 60.9
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.2e-35 153.3 110 61.8
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 2.2e-35 153.3 109 63.3
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.2e-35 153.3 110 62.7
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.9e-35 152.9 110 62.7
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 2.9e-35 152.9 116 57.8
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.8e-35 152.5 110 60.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 3.8e-35 152.5 109 62.4
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 3.8e-35 152.5 109 62.4
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.8e-35 152.5 111 62.2
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 3.8e-35 152.5 110 62.7
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.8e-35 152.5 108 63.9
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 4.9e-35 152.1 108 63.0
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 4.9e-35 152.1 110 62.7
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 4.9e-35 152.1 111 62.2
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 4.9e-35 152.1 110 61.8
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 4.9e-35 152.1 108 63.0
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.9e-35 152.1 110 60.9
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 4.9e-35 152.1 110 62.7
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 6.4e-35 151.8 110 60.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 6.4e-35 151.8 110 61.8
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 6.4e-35 151.8 110 61.8
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 8.4e-35 151.4 109 61.5
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 8.4e-35 151.4 108 62.0
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 8.4e-35 151.4 109 61.5
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 8.4e-35 151.4 110 60.9
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 8.4e-35 151.4 110 61.8
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 8.4e-35 151.4 108 62.0
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 8.4e-35 151.4 111 62.2
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 8.4e-35 151.4 115 59.1
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.1e-34 151.0 108 62.0
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 1.1e-34 151.0 108 62.0
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.1e-34 151.0 108 62.0
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.1e-34 151.0 108 62.0
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.1e-34 151.0 110 60.9
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.1e-34 151.0 187 47.6
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 1.1e-34 151.0 110 60.9
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.1e-34 151.0 172 48.8
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.1e-34 151.0 111 61.3
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.4e-34 150.6 110 61.8
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.4e-34 150.6 110 60.0
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.4e-34 150.6 110 61.8
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.4e-34 150.6 110 61.8
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.4e-34 150.6 121 56.2
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.4e-34 150.6 111 63.1
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.9e-34 150.2 110 60.0
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 1.9e-34 150.2 110 60.0
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 1.9e-34 150.2 110 60.9
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.9e-34 150.2 110 60.9
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.9e-34 150.2 110 61.8
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.4e-34 149.8 110 62.7
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 3.2e-34 149.4 110 61.8
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 3.2e-34 149.4 111 61.3
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 4.2e-34 149.1 111 57.7
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.2e-34 149.1 110 62.7
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 4.2e-34 149.1 108 61.1
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 4.2e-34 149.1 110 60.9
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 4.2e-34 149.1 107 62.6
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 5.5e-34 148.7 111 64.0
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 5.5e-34 148.7 110 60.9
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 5.5e-34 148.7 110 60.9
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 7.1e-34 148.3 110 60.0
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 7.1e-34 148.3 141 51.1
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 9.3e-34 147.9 110 60.0
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 9.3e-34 147.9 110 60.0
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 9.3e-34 147.9 108 60.2
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.2e-33 147.5 110 61.8
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.2e-33 147.5 108 60.2
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 1.2e-33 147.5 110 60.9
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 1.6e-33 147.1 110 60.0
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 1.6e-33 147.1 108 60.2
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.6e-33 147.1 110 57.3
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.1e-33 146.7 174 46.0
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 2.1e-33 146.7 102 62.7
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 2.7e-33 146.4 110 58.2
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.7e-33 146.4 122 57.4
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 3.5e-33 146.0 116 58.6
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.6e-33 145.6 110 59.1
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.8e-32 143.7 110 58.2
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 3.3e-31 139.4 102 61.8
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 3.7e-30 136.0 157 45.9
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.4e-21 107.5 128 44.5
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 3.2e-18 96.3 110 46.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 3.7e-14 82.8 59 64.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 3.7e-14 82.8 59 64.4
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.2e-10 69.7 49 61.2
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 4.6e-09 65.9 52 53.8
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 6.7e-08 62.0 67 47.8
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 5.7e-07 58.9 35 68.6


User provided reference genes

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