Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12548 Chara braunii HOM05D003288 ORTHO05D003734 0.0e+00 1836.2 1405 100.0
Mapoly0046s0117 Marchantia polymorpha HOM05D003288 ORTHO05D003734 2.8e-27 129.0 289 33.6
Pp3c8_19560 Physcomitrium patens HOM05D003288 ORTHO05D003734 4.5e-25 121.7 219 32.9
CDE06G2565 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 1.5e-20 106.7 297 31.0
CDE07G0160 Ceratophyllum demersum HOM05D003288 ORTHO05D003734 2.5e-20 105.9 270 31.5
SEGI_20345 Sequoiadendron giganteum HOM05D003288 ORTHO05D003734 3.1e-18 99.0 306 24.8
Nn5g28678 Nelumbo nucifera HOM05D003288 ORTHO05D003734 4.1e-18 98.6 306 26.8
MD09G1266100 Malus domestica HOM05D003288 ORTHO05D003734 1.2e-17 97.1 298 28.2
PGR083G1244 Punica granatum HOM05D003288 ORTHO05D003734 1.2e-17 97.1 341 26.7
TAR629G0745 Trochodendron aralioides HOM05D003288 ORTHO05D003734 1.5e-17 96.7 315 26.7
ECA238G4239 Erigeron canadensis HOM05D003288 ORTHO05D003734 2.6e-17 95.9 290 26.9
MBI13_g04499_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 2.6e-17 95.9 126 38.1
Lsat_1_v5_gn_4_26961 Lactuca sativa HOM05D003288 ORTHO05D003734 4.5e-17 95.1 121 38.8
PSO210G4855 Papaver somniferum HOM05D003288 ORTHO05D003734 5.9e-17 94.7 291 27.8
TAR629G1838 Trochodendron aralioides HOM05D003288 ORTHO05D003734 1.0e-16 94.0 303 24.8
Cpa.g.sc116.89 Carica papaya HOM05D003288 ORTHO05D003734 1.3e-16 93.6 302 25.8
MBI13_g04500_MAGBIO Magnolia biondii HOM05D003288 ORTHO05D003734 1.3e-16 93.6 134 36.6
CANSAT64G0297 Cannabis sativa HOM05D003288 ORTHO05D003734 3.8e-16 92.0 122 38.5
Nn4g23260 Nelumbo nucifera HOM05D003288 ORTHO05D003734 3.8e-16 92.0 319 25.4
DCAR_030537 Daucus carota HOM05D003288 ORTHO05D003734 6.5e-16 91.3 177 32.2
HanXRQChr13g0424601 Helianthus annuus HOM05D003288 ORTHO05D003734 8.5e-16 90.9 154 33.1
Lsat_1_v5_gn_3_104940 Lactuca sativa HOM05D003288 ORTHO05D003734 8.5e-16 90.9 291 24.7
TAR623G0700 Trochodendron aralioides HOM05D003288 ORTHO05D003734 1.4e-15 90.1 287 26.5
Aqoxy2G03361 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 1.9e-15 89.7 327 24.5
CsaV3_4G000640 Cucumis sativus L. HOM05D003288 ORTHO05D003734 1.9e-15 89.7 288 25.7
Lsat_1_v5_gn_3_125960 Lactuca sativa HOM05D003288 ORTHO05D003734 2.5e-15 89.4 105 41.0
Prupe.3G163900 Prunus persica HOM05D003288 ORTHO05D003734 2.5e-15 89.4 134 36.6
GSVIVG01030016001 Vitis vinifera HOM05D003288 ORTHO05D003734 2.5e-15 89.4 303 25.1
Atru.chr6.3343 Acer truncatum HOM05D003288 ORTHO05D003734 4.2e-15 88.6 124 34.7
Actinidia17186 Actinidia chinensis HOM05D003288 ORTHO05D003734 4.2e-15 88.6 132 36.4
Ciclev10011340m.g Citrus clementina HOM05D003288 ORTHO05D003734 4.2e-15 88.6 286 26.9
MELO3C017972.2 Cucumis melo HOM05D003288 ORTHO05D003734 4.2e-15 88.6 288 25.7
Prupe.3G204300 Prunus persica HOM05D003288 ORTHO05D003734 4.2e-15 88.6 121 36.4
QL01p003767 Quercus lobata HOM05D003288 ORTHO05D003734 4.2e-15 88.6 129 35.7
PSO210G3953 Papaver somniferum HOM05D003288 ORTHO05D003734 5.5e-15 88.2 121 37.2
Cc02_g09200 Coffea canephora HOM05D003288 ORTHO05D003734 9.4e-15 87.4 285 27.0
RcHm_v2.0_Chr2g0157531 Rosa chinensis HOM05D003288 ORTHO05D003734 9.4e-15 87.4 134 35.8
Rhsim12G0111000 Rhododendron simsii HOM05D003288 ORTHO05D003734 1.6e-14 86.7 121 36.4
Eucgr.F02892 Eucalyptus grandis HOM05D003288 ORTHO05D003734 2.1e-14 86.3 111 40.5
Manes.02G079400 Manihot esculenta HOM05D003288 ORTHO05D003734 2.1e-14 86.3 296 26.4
PSO210G3300 Papaver somniferum HOM05D003288 ORTHO05D003734 2.1e-14 86.3 113 37.2
Ca_03338_v3 Cicer arietinum L. HOM05D003288 ORTHO05D003734 2.7e-14 85.9 123 34.1
BraA10t43361Z Brassica rapa HOM05D003288 ORTHO05D003734 3.6e-14 85.5 133 33.8
CSS0026322 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 3.6e-14 85.5 125 35.2
COL.COLO4_06958 Corchorus olitorius HOM05D003288 ORTHO05D003734 3.6e-14 85.5 265 26.8
Lj2g0015416 Lotus japonicus HOM05D003288 ORTHO05D003734 3.6e-14 85.5 296 25.3
SHI30119 Sapria himalayana HOM05D003288 ORTHO05D003734 4.6e-14 85.1 130 35.4
vmacro23304 Vaccinium macrocarpon HOM05D003288 ORTHO05D003734 4.6e-14 85.1 161 32.3
SalBow4G2398 Salvia bowleyana HOM05D003288 ORTHO05D003734 6.1e-14 84.7 286 24.8
Atru.chr7.1988 Acer truncatum HOM05D003288 ORTHO05D003734 7.9e-14 84.3 122 33.6
FAN02G4572 Fragaria x ananassa HOM05D003288 ORTHO05D003734 7.9e-14 84.3 122 36.9
HanXRQChr03g0092531 Helianthus annuus HOM05D003288 ORTHO05D003734 7.9e-14 84.3 112 38.4
QL01p032763 Quercus lobata HOM05D003288 ORTHO05D003734 7.9e-14 84.3 126 34.9
QL02p059844 Quercus lobata HOM05D003288 ORTHO05D003734 7.9e-14 84.3 130 33.8
TWI74G0189 Tripterygium wilfordii HOM05D003288 ORTHO05D003734 7.9e-14 84.3 399 26.1
ClCG10G010670 Citrullus lanatus HOM05D003288 ORTHO05D003734 1.0e-13 84.0 288 25.3
ECA234G0526 Erigeron canadensis HOM05D003288 ORTHO05D003734 1.0e-13 84.0 103 38.8
FAN14G3219 Fragaria x ananassa HOM05D003288 ORTHO05D003734 1.0e-13 84.0 129 35.7
Lj5g0021383 Lotus japonicus HOM05D003288 ORTHO05D003734 1.0e-13 84.0 121 33.1
Medtr2g063920 Medicago truncatula HOM05D003288 ORTHO05D003734 1.0e-13 84.0 121 33.1
PSO447G0361 Papaver somniferum HOM05D003288 ORTHO05D003734 1.0e-13 84.0 213 30.5
Psat1g016080 Pisum sativum HOM05D003288 ORTHO05D003734 1.0e-13 84.0 105 37.1
THA.LOC104805978 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 1.0e-13 84.0 141 34.8
THA.LOC109115998 Tarenaya hassleriana HOM05D003288 ORTHO05D003734 1.0e-13 84.0 141 34.8
Glyma.18G042400 Glycine max HOM05D003288 ORTHO05D003734 1.4e-13 83.6 126 33.3
Lj2C515T4 Lonicera japonica HOM05D003288 ORTHO05D003734 1.4e-13 83.6 258 27.1
arahy.Tifrunner.gnm1.ann1.NZ46DJ Arachis hypogaea HOM05D003288 ORTHO05D003734 1.8e-13 83.2 121 34.7
Glyma.05G018700 Glycine max HOM05D003288 ORTHO05D003734 1.8e-13 83.2 126 33.3
RcHm_v2.0_Chr2g0142951 Rosa chinensis HOM05D003288 ORTHO05D003734 1.8e-13 83.2 126 34.1
Dinv28220 Davidia involucrata HOM05D003288 ORTHO05D003734 2.3e-13 82.8 286 25.5
Thhalv10015474m.g Eutrema salsugineum HOM05D003288 ORTHO05D003734 2.3e-13 82.8 294 26.2
Oeu009426.1 Olea europaea HOM05D003288 ORTHO05D003734 2.3e-13 82.8 299 25.8
FvH4_6g33230 Fragaria vesca HOM05D003288 ORTHO05D003734 3.0e-13 82.4 121 34.7
Glyma.11G214200 Glycine max HOM05D003288 ORTHO05D003734 3.0e-13 82.4 121 33.9
arahy.Tifrunner.gnm1.ann1.BXR7J4 Arachis hypogaea HOM05D003288 ORTHO05D003734 3.9e-13 82.0 121 33.9
FvH4_6g41730 Fragaria vesca HOM05D003288 ORTHO05D003734 3.9e-13 82.0 199 29.1
Phvul.001G228800 Phaseolus vulgaris HOM05D003288 ORTHO05D003734 3.9e-13 82.0 130 33.8
Aqoxy3G02762 Aquilegia oxysepala HOM05D003288 ORTHO05D003734 5.1e-13 81.6 297 24.6
FAN09G2221 Fragaria x ananassa HOM05D003288 ORTHO05D003734 5.1e-13 81.6 129 35.7
Gohir.A12G143700 Gossypium hirsutum HOM05D003288 ORTHO05D003734 5.1e-13 81.6 344 24.4
Lj7A364T81 Lonicera japonica HOM05D003288 ORTHO05D003734 5.1e-13 81.6 296 27.7
Sabra17G0111500 Salix brachista HOM05D003288 ORTHO05D003734 5.1e-13 81.6 126 34.1
HPP92_013124 Vanilla planifolia HOM05D003288 ORTHO05D003734 5.1e-13 81.6 142 33.8
AT5G55490 Arabidopsis thaliana HOM05D003288 ORTHO05D003734 6.7e-13 81.3 298 23.5
Carub.0008s1584 Capsella rubella HOM05D003288 ORTHO05D003734 6.7e-13 81.3 282 27.3
Haze_14295 Corylus avellana HOM05D003288 ORTHO05D003734 6.7e-13 81.3 296 24.3
Glyma.17G080975 Glycine max HOM05D003288 ORTHO05D003734 6.7e-13 81.3 126 33.3
arahy.Tifrunner.gnm1.ann1.F6RFY9 Arachis hypogaea HOM05D003288 ORTHO05D003734 8.8e-13 80.9 300 24.7
arahy.Tifrunner.gnm1.ann1.G6QY2G Arachis hypogaea HOM05D003288 ORTHO05D003734 8.8e-13 80.9 300 24.7
Duzib138G1645 Durio zibethinus HOM05D003288 ORTHO05D003734 8.8e-13 80.9 122 34.4
Medtr2g063823 Medicago truncatula HOM05D003288 ORTHO05D003734 8.8e-13 80.9 105 36.2
Medtr6g091980 Medicago truncatula HOM05D003288 ORTHO05D003734 8.8e-13 80.9 105 37.1
CSS0016947 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 1.1e-12 80.5 314 25.2
Psat0s1991g0080 Pisum sativum HOM05D003288 ORTHO05D003734 1.1e-12 80.5 105 37.1
Sabra17G0111800 Salix brachista HOM05D003288 ORTHO05D003734 1.1e-12 80.5 126 33.3
VMungo1383G3441 Vigna mungo HOM05D003288 ORTHO05D003734 1.1e-12 80.5 121 32.2
CAN.G1256.15 Capsicum annuum HOM05D003288 ORTHO05D003734 1.5e-12 80.1 299 27.1
CARHR268800 Cardamine hirsuta HOM05D003288 ORTHO05D003734 1.5e-12 80.1 134 33.6
Sed0014607 Sechium edule HOM05D003288 ORTHO05D003734 1.5e-12 80.1 400 23.5
unitig_748.g8456 Utricularia gibba HOM05D003288 ORTHO05D003734 1.5e-12 80.1 314 24.8
Haze_12714 Corylus avellana HOM05D003288 ORTHO05D003734 2.0e-12 79.7 121 34.7
AL8G31020 Arabidopsis lyrata HOM05D003288 ORTHO05D003734 2.5e-12 79.3 310 24.8
Medtr2g063863 Medicago truncatula HOM05D003288 ORTHO05D003734 3.3e-12 79.0 108 35.2
QL09p034880 Quercus lobata HOM05D003288 ORTHO05D003734 3.3e-12 79.0 121 35.5
Rhsim10G0182400 Rhododendron simsii HOM05D003288 ORTHO05D003734 3.3e-12 79.0 305 24.9
Duzib268G1591 Durio zibethinus HOM05D003288 ORTHO05D003734 4.3e-12 78.6 225 26.2
Potri.017G137100 Populus trichocarpa HOM05D003288 ORTHO05D003734 4.3e-12 78.6 126 32.5
AUR62035243 Chenopodium quinoa HOM05D003288 ORTHO05D003734 5.7e-12 78.2 294 24.5
Ah.03g141820 Amaranthus hybridus HOM05D003288 ORTHO05D003734 7.4e-12 77.8 130 33.8
DCAR_014148 Daucus carota HOM05D003288 ORTHO05D003734 9.7e-12 77.4 121 30.6
Lalb_Chr15g0085041 Lupinus albus HOM05D003288 ORTHO05D003734 9.7e-12 77.4 400 23.5
Sabra17G0114500 Salix brachista HOM05D003288 ORTHO05D003734 9.7e-12 77.4 126 32.5
EL10As8g23882 Beta vulgaris HOM05D003288 ORTHO05D003734 1.3e-11 77.0 305 23.6
Hund06475 Selenicereus undatus HOM05D003288 ORTHO05D003734 1.3e-11 77.0 166 29.5
Sc18g0007110 Simmondsia chinensis HOM05D003288 ORTHO05D003734 1.3e-11 77.0 306 23.2
A03p14030 Brassica napus HOM05D003288 ORTHO05D003734 1.7e-11 76.6 102 38.2
C03p16470 Brassica napus HOM05D003288 ORTHO05D003734 1.7e-11 76.6 102 38.2
AUR62017809 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.7e-11 76.6 254 26.4
ECA240G0593 Erigeron canadensis HOM05D003288 ORTHO05D003734 1.7e-11 76.6 263 25.1
BolC3t14067H Brassica oleracea HOM05D003288 ORTHO05D003734 2.8e-11 75.9 102 38.2
PGSC0003DMG400000983 Solanum tuberosum HOM05D003288 ORTHO05D003734 2.8e-11 75.9 314 26.1
ECA240G3548 Erigeron canadensis HOM05D003288 ORTHO05D003734 4.8e-11 75.1 301 25.9
Thecc.04G002200 Theobroma cacao HOM05D003288 ORTHO05D003734 6.3e-11 74.7 285 25.3
A10p16000 Brassica napus HOM05D003288 ORTHO05D003734 1.1e-10 73.9 133 33.1
Solyc11g006310.2 Solanum lycopersicum HOM05D003288 ORTHO05D003734 1.1e-10 73.9 309 25.9
TPR.G37900 Trifolium pratense HOM05D003288 ORTHO05D003734 1.1e-10 73.9 139 30.2
TPR.G8950 Trifolium pratense HOM05D003288 ORTHO05D003734 1.1e-10 73.9 293 22.9
AUR62004111 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.4e-10 73.6 294 23.8
AUR62023637 Chenopodium quinoa HOM05D003288 ORTHO05D003734 1.4e-10 73.6 340 24.4
A10p12610 Brassica napus HOM05D003288 ORTHO05D003734 1.8e-10 73.2 98 36.7
Aa31LG2G2840 Aethionema arabicum HOM05D003288 ORTHO05D003734 2.4e-10 72.8 117 34.2
CSS0043791 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 2.4e-10 72.8 124 34.7
Cfa007776 Carpinus fangiana HOM05D003288 ORTHO05D003734 2.4e-10 72.8 304 24.0
MD17G1110600 Malus domestica HOM05D003288 ORTHO05D003734 2.4e-10 72.8 155 29.0
Gohir.D12G148400 Gossypium hirsutum HOM05D003288 ORTHO05D003734 3.1e-10 72.4 350 23.7
Nitab4.5_0002640g0060 Nicotiana tabacum HOM05D003288 ORTHO05D003734 4.1e-10 72.0 299 25.1
Rhsim10G0181900 Rhododendron simsii HOM05D003288 ORTHO05D003734 4.1e-10 72.0 144 29.2
Sp6g17370 Schrenkiella parvula HOM05D003288 ORTHO05D003734 5.3e-10 71.6 96 36.5
BcaB08g35905 Brassica carinata HOM05D003288 ORTHO05D003734 1.2e-09 70.5 96 36.5
BcaNung05847 Brassica carinata HOM05D003288 ORTHO05D003734 1.2e-09 70.5 96 36.5
C09p46140 Brassica napus HOM05D003288 ORTHO05D003734 1.2e-09 70.5 96 36.5
BolC9t57480H Brassica oleracea HOM05D003288 ORTHO05D003734 1.2e-09 70.5 96 36.5
Zm00001eb314230 Zea mays HOM05D003288 ORTHO05D003734 1.2e-09 70.5 304 22.4
Migut.A00479 Erythranthe guttata HOM05D003288 ORTHO05D003734 1.5e-09 70.1 286 23.1
AUR62007625 Chenopodium quinoa HOM05D003288 ORTHO05D003734 5.9e-09 68.2 302 23.5
BcaC01g06370 Brassica carinata HOM05D003288 ORTHO05D003734 7.7e-09 67.8 94 37.2
BraA03t10702Z Brassica rapa HOM05D003288 ORTHO05D003734 7.7e-09 67.8 315 23.8
PRCOL_00006849 Prasinoderma coloniale HOM05D003288 ORTHO05D003734 1.0e-08 67.4 259 25.5
SGA_v2.0_scaffold96G29122 Striga asiatica HOM05D003288 ORTHO05D003734 1.3e-08 67.0 297 23.6
HanXRQChr03g0092541 Helianthus annuus HOM05D003288 ORTHO05D003734 1.7e-08 66.6 121 31.4
FAN02G3499 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.2e-08 66.2 154 27.3
EL10Ac6g15375 Beta vulgaris HOM05D003288 ORTHO05D003734 2.9e-08 65.9 201 27.4
FAN05G3577 Fragaria x ananassa HOM05D003288 ORTHO05D003734 2.9e-08 65.9 154 26.6
Os09g0442400 Oryza sativa ssp. japonica HOM05D003288 ORTHO05D003734 2.9e-08 65.9 318 22.0
Lalb_Chr05g0212271 Lupinus albus HOM05D003288 ORTHO05D003734 3.8e-08 65.5 426 21.1
EL10Ac6g15379 Beta vulgaris HOM05D003288 ORTHO05D003734 5.0e-08 65.1 182 28.0
Gorai.008G159700 Gossypium raimondii HOM05D003288 ORTHO05D003734 1.9e-07 63.2 215 25.1
FAN09G4788 Fragaria x ananassa HOM05D003288 ORTHO05D003734 7.2e-07 61.2 266 23.3
FAN14G0969 Fragaria x ananassa HOM05D003288 ORTHO05D003734 1.2e-06 60.5 266 22.9
DCAR_004634 Daucus carota HOM05D003288 ORTHO05D003734 2.7e-06 59.3 193 23.8
CSS0001357 Camellia sinensis var. sinensis HOM05D003288 ORTHO05D003734 6.1e-06 58.2 69 40.6


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