Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12491 Chara braunii HOM05D023318 ORTHO05D028739 3.0e-214 748.4 435 100.0
Cre10.g441750 Chlamydomonas reinhardtii HOM05D023318 ORTHO05D028739 2.7e-13 80.9 176 33.5
MCO01G024 Micromonas commoda HOM05D023318 ORTHO05D028739 8.2e-10 69.3 235 27.2
AL8G16320 Arabidopsis lyrata HOM05D000770 ORTHO05D000586 5.9e-08 63.2 173 28.3
CARHR179610 Cardamine hirsuta HOM05D000770 ORTHO05D000586 7.6e-08 62.8 173 28.3
AT5G43830 Arabidopsis thaliana HOM05D000770 ORTHO05D000586 1.0e-07 62.4 173 28.3
Cc03_g04340 Coffea canephora HOM05D000770 ORTHO05D000586 1.0e-07 62.4 223 26.9
Aa31LG5G3460 Aethionema arabicum HOM05D000770 ORTHO05D000586 1.3e-07 62.0 174 28.2
Carub.0008s0479 Capsella rubella HOM05D000770 ORTHO05D000586 1.7e-07 61.6 173 27.2
Gohir.D01G022100 Gossypium hirsutum HOM05D000770 ORTHO05D000586 2.2e-07 61.2 223 24.7
Gorai.002G024600 Gossypium raimondii HOM05D000770 ORTHO05D000586 2.2e-07 61.2 223 24.7
MSTRG.9947 Avicennia marina HOM05D000770 ORTHO05D000586 8.4e-07 59.3 175 29.1
MD00G1095400 Malus domestica HOM05D000770 ORTHO05D000586 8.4e-07 59.3 96 37.5
Peaxi162Scf00316g00330 Petunia axillaris HOM05D000770 ORTHO05D000586 1.1e-06 58.9 223 25.6
PGR142G3508 Punica granatum HOM05D000770 ORTHO05D000586 1.1e-06 58.9 175 28.0
Sabra10G0061300 Salix brachista HOM05D000770 ORTHO05D000586 1.1e-06 58.9 192 25.5
Sp2g08630 Schrenkiella parvula HOM05D000770 ORTHO05D000586 1.1e-06 58.9 175 26.3
PGSC0003DMG400030170 Solanum tuberosum HOM05D000770 ORTHO05D000586 1.1e-06 58.9 223 25.6
Gohir.A01G024100 Gossypium hirsutum HOM05D000770 ORTHO05D000586 1.4e-06 58.5 204 24.5
Nitab4.5_0002652g0010 Nicotiana tabacum HOM05D000770 ORTHO05D000586 1.9e-06 58.2 223 25.6
Potri.010G081600 Populus trichocarpa HOM05D000770 ORTHO05D000586 1.9e-06 58.2 192 25.5
Duzib212G0482 Durio zibethinus HOM05D000770 ORTHO05D000586 2.5e-06 57.8 240 25.4
Actinidia04507 Actinidia chinensis HOM05D000770 ORTHO05D000586 3.2e-06 57.4 224 24.6
CSS0017632 Camellia sinensis var. sinensis HOM05D000770 ORTHO05D000586 4.2e-06 57.0 224 24.1
CAN.G1435.10 Capsicum annuum HOM05D000770 ORTHO05D000586 4.2e-06 57.0 173 26.0
CDE10G0163 Ceratophyllum demersum HOM05D000770 ORTHO05D000586 4.2e-06 57.0 189 27.0
Nitab4.5_0007166g0030 Nicotiana tabacum HOM05D000770 ORTHO05D000586 4.2e-06 57.0 223 25.1
Sabra08G0120700 Salix brachista HOM05D000770 ORTHO05D000586 4.2e-06 57.0 175 26.9
Thecc.04G239500 Theobroma cacao HOM05D000770 ORTHO05D000586 4.2e-06 57.0 222 25.2
Gohir.A09G057000 Gossypium hirsutum HOM05D000770 ORTHO05D000586 5.5e-06 56.6 240 25.0
BcaC01g03413 Brassica carinata HOM05D000770 ORTHO05D000586 7.2e-06 56.2 176 30.1
C03p52810 Brassica napus HOM05D000770 ORTHO05D000586 7.2e-06 56.2 176 30.1
BolC3t17550H Brassica oleracea HOM05D000770 ORTHO05D000586 7.2e-06 56.2 176 30.1
Potri.008G158400 Populus trichocarpa HOM05D000770 ORTHO05D000586 7.2e-06 56.2 175 26.9
AL3G37190 Arabidopsis lyrata HOM05D000770 ORTHO05D000586 9.3e-06 55.8 174 29.3
MSTRG.4065 Avicennia marina HOM05D000770 ORTHO05D000586 9.3e-06 55.8 174 27.0


User provided reference genes

Program Settings