Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12323 Chara braunii HOM05D005176 ORTHO05D006482 8.3e-87 323.6 150 100.0
SMO147G0375 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 3.8e-23 112.1 65 80.0
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis HOM05D005176 ORTHO05D006482 6.5e-23 111.3 64 78.1
Mapoly0003s0157 Marchantia polymorpha HOM05D005176 ORTHO05D006482 1.4e-22 110.2 64 78.1
Ca_00707_v3 Cicer arietinum L. HOM05D005176 ORTHO05D006482 1.1e-19 100.5 65 66.2
Pp3c27_6780 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.5e-19 100.1 61 68.9
FAN21G2852 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.9e-19 99.8 65 67.7
Lj6g0018145 Lotus japonicus HOM05D005176 ORTHO05D006482 1.9e-19 99.8 65 64.6
Phvul.006G144800 Phaseolus vulgaris HOM05D005176 ORTHO05D006482 1.9e-19 99.8 65 66.2
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea HOM05D005176 ORTHO05D006482 3.3e-19 99.0 65 66.2
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea HOM05D005176 ORTHO05D006482 3.3e-19 99.0 65 66.2
FAN25G2381 Fragaria x ananassa HOM05D005176 ORTHO05D006482 3.3e-19 99.0 65 67.7
Medtr2g025140 Medicago truncatula HOM05D005176 ORTHO05D006482 4.3e-19 98.6 65 64.6
Lalb_Chr15g0087861 Lupinus albus HOM05D005176 ORTHO05D006482 5.7e-19 98.2 65 64.6
Manes.16G002000 Manihot esculenta HOM05D005176 ORTHO05D006482 5.7e-19 98.2 65 66.2
Lsat_1_v5_gn_7_14460 Lactuca sativa HOM05D005176 ORTHO05D006482 1.3e-18 97.1 65 61.5
Lj1A1237T47 Lonicera japonica HOM05D005176 ORTHO05D006482 1.3e-18 97.1 65 61.5
TPR.G13024 Trifolium pratense HOM05D005176 ORTHO05D006482 1.3e-18 97.1 65 63.1
VMungo0540G1825 Vigna mungo HOM05D005176 ORTHO05D006482 1.3e-18 97.1 65 63.1
MSTRG.16005 Avicennia marina HOM05D005176 ORTHO05D006482 1.6e-18 96.7 65 64.6
Prupe.4G013400 Prunus persica HOM05D005176 ORTHO05D006482 1.6e-18 96.7 65 66.2
Rhsim13G0148600 Rhododendron simsii HOM05D005176 ORTHO05D006482 1.6e-18 96.7 65 64.6
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 2.2e-18 96.3 65 64.6
CAN.G1186.9 Capsicum annuum HOM05D005176 ORTHO05D006482 2.8e-18 95.9 65 61.5
FvH4_3g01250 Fragaria vesca HOM05D005176 ORTHO05D006482 2.8e-18 95.9 65 66.2
Cpa.g.sc152.62 Carica papaya HOM05D005176 ORTHO05D006482 3.7e-18 95.5 65 64.6
Psat1g177440 Pisum sativum HOM05D005176 ORTHO05D006482 3.7e-18 95.5 65 63.1
Glyma.09G008500 Glycine max HOM05D005176 ORTHO05D006482 4.8e-18 95.1 65 63.1
Glyma.15G112900 Glycine max HOM05D005176 ORTHO05D006482 4.8e-18 95.1 65 63.1
Solyc11g011990.2 Solanum lycopersicum HOM05D005176 ORTHO05D006482 4.8e-18 95.1 65 61.5
Sopen11g006800 Solanum pennellii HOM05D005176 ORTHO05D006482 4.8e-18 95.1 65 61.5
PGSC0003DMG400013335 Solanum tuberosum HOM05D005176 ORTHO05D006482 4.8e-18 95.1 65 61.5
Ciclev10015546m.g Citrus clementina HOM05D005176 ORTHO05D006482 6.3e-18 94.7 65 61.5
Dinv20117 Davidia involucrata HOM05D005176 ORTHO05D006482 6.3e-18 94.7 65 63.1
CSS0003829 Camellia sinensis var. sinensis HOM05D005176 ORTHO05D006482 8.2e-18 94.4 65 61.5
Oeu002752.3 Olea europaea HOM05D005176 ORTHO05D006482 8.2e-18 94.4 65 63.1
QL03p008214 Quercus lobata HOM05D005176 ORTHO05D006482 8.2e-18 94.4 65 63.1
QL05p070074 Quercus lobata HOM05D005176 ORTHO05D006482 8.2e-18 94.4 65 63.1
Cfa000134 Carpinus fangiana HOM05D005176 ORTHO05D006482 1.4e-17 93.6 65 63.1
CBR_g16017 Chara braunii HOM05D005176 ORTHO05D006482 1.4e-17 93.6 65 64.6
Haze_06890 Corylus avellana HOM05D005176 ORTHO05D006482 1.4e-17 93.6 65 63.1
RcHm_v2.0_Chr5g0001781 Rosa chinensis HOM05D005176 ORTHO05D006482 1.4e-17 93.6 65 63.1
Actinidia26877 Actinidia chinensis HOM05D005176 ORTHO05D006482 1.8e-17 93.2 65 61.5
CiPaw.09G100100 Carya illinoinensis HOM05D005176 ORTHO05D006482 1.8e-17 93.2 65 61.5
PSO832G1336 Papaver somniferum HOM05D005176 ORTHO05D006482 1.8e-17 93.2 65 63.1
AUR62012769 Chenopodium quinoa HOM05D005176 ORTHO05D006482 2.4e-17 92.8 65 63.1
Pp3c2_11230 Physcomitrium patens HOM05D005176 ORTHO05D006482 2.4e-17 92.8 65 63.1
SalBow8G4341 Salvia bowleyana HOM05D005176 ORTHO05D006482 2.4e-17 92.8 65 63.1
Nn1g03357 Nelumbo nucifera HOM05D005176 ORTHO05D006482 4.1e-17 92.0 65 63.1
THA.LOC104812984 Tarenaya hassleriana HOM05D005176 ORTHO05D006482 4.1e-17 92.0 65 58.5
SMO200G0146 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 5.3e-17 91.7 65 63.1
Atru.chr10.2310 Acer truncatum HOM05D005176 ORTHO05D006482 6.9e-17 91.3 65 58.5
Sabra04G0001100 Salix brachista HOM05D005176 ORTHO05D006482 6.9e-17 91.3 65 61.5
Hund21443 Selenicereus undatus HOM05D005176 ORTHO05D006482 6.9e-17 91.3 65 61.5
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 9.0e-17 90.9 65 58.5
BraA01t01306Z Brassica rapa HOM05D005176 ORTHO05D006482 9.0e-17 90.9 65 58.5
Migut.M01360 Erythranthe guttata HOM05D005176 ORTHO05D006482 9.0e-17 90.9 65 63.1
Pp3c1_30120 Physcomitrium patens HOM05D005176 ORTHO05D006482 9.0e-17 90.9 65 61.5
Sp7g20380 Schrenkiella parvula HOM05D005176 ORTHO05D006482 1.2e-16 90.5 65 60.0
AT4G22260 Arabidopsis thaliana HOM05D005176 ORTHO05D006482 1.5e-16 90.1 65 58.5
Cc09_g01070 Coffea canephora HOM05D005176 ORTHO05D006482 1.5e-16 90.1 65 60.0
EL10Ac8g20147 Beta vulgaris HOM05D005176 ORTHO05D006482 2.0e-16 89.7 65 61.5
Eucgr.E03967 Eucalyptus grandis HOM05D005176 ORTHO05D006482 2.0e-16 89.7 65 63.1
HanXRQChr05g0129171 Helianthus annuus HOM05D005176 ORTHO05D006482 2.0e-16 89.7 65 60.0
MD10G1328600 Malus domestica HOM05D005176 ORTHO05D006482 2.0e-16 89.7 65 60.0
Potri.004G002600 Populus trichocarpa HOM05D005176 ORTHO05D006482 2.0e-16 89.7 65 60.0
vmacro03656 Vaccinium macrocarpon HOM05D005176 ORTHO05D006482 2.0e-16 89.7 73 57.5
BcaNung03749 Brassica carinata HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 58.5
MELO3C021708.2 Cucumis melo HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 63.1
Duzib160G0919 Durio zibethinus HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 60.0
Eucgr.E03960 Eucalyptus grandis HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 61.5
PGR042G2916 Punica granatum HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 60.0
Sed0020812 Sechium edule HOM05D005176 ORTHO05D006482 2.6e-16 89.4 65 61.5
BcaC09g51146 Brassica carinata HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 58.5
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 58.5
BolC1t01601H Brassica oleracea HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 58.5
CANSAT56G2407 Cannabis sativa HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 60.0
CARHR229150 Cardamine hirsuta HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 58.5
COL.COLO4_31852 Corchorus olitorius HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 61.5
MELO3C021713.2 Cucumis melo HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 63.1
CsaV3_1G045890 Cucumis sativus L. HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 63.1
Mapoly0050s0020 Marchantia polymorpha HOM05D005176 ORTHO05D006482 3.4e-16 89.0 65 60.0
Gohir.A05G173800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 4.5e-16 88.6 65 58.5
Potri.011G021800 Populus trichocarpa HOM05D005176 ORTHO05D006482 4.5e-16 88.6 65 60.0
Aqoxy1G04164 Aquilegia oxysepala HOM05D005176 ORTHO05D006482 5.9e-16 88.2 65 58.5
Gohir.D05G176800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 5.9e-16 88.2 65 58.5
Gorai.009G182200 Gossypium raimondii HOM05D005176 ORTHO05D006482 5.9e-16 88.2 65 58.5
TWI63G1683 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 5.9e-16 88.2 65 61.5
AL7G31370 Arabidopsis lyrata HOM05D005176 ORTHO05D006482 7.6e-16 87.8 65 56.9
Carub.0007s1906 Capsella rubella HOM05D005176 ORTHO05D006482 7.6e-16 87.8 65 55.4
Sabra11G0011400 Salix brachista HOM05D005176 ORTHO05D006482 7.6e-16 87.8 65 58.5
Sabra11G0013200 Salix brachista HOM05D005176 ORTHO05D006482 7.6e-16 87.8 65 58.5
TAR624G0457 Trochodendron aralioides HOM05D005176 ORTHO05D006482 7.6e-16 87.8 65 60.0
Cre07.g350750 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 1.0e-15 87.4 65 64.6
Sc05g0009510 Simmondsia chinensis HOM05D005176 ORTHO05D006482 1.3e-15 87.0 65 60.0
Thecc.06G230100 Theobroma cacao HOM05D005176 ORTHO05D006482 1.3e-15 87.0 65 58.5
TAR626G1813 Trochodendron aralioides HOM05D005176 ORTHO05D006482 1.3e-15 87.0 65 61.5
Zm00001eb066910 Zea mays HOM05D005176 ORTHO05D006482 1.3e-15 87.0 65 58.5
Zm00001eb066920 Zea mays HOM05D005176 ORTHO05D006482 1.3e-15 87.0 65 58.5
ATR1128G104 Amborella trichopoda HOM05D005176 ORTHO05D006482 1.7e-15 86.7 65 60.0
Os04g0668900 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D006482 2.2e-15 86.3 65 56.9
Thhalv10025624m.g Eutrema salsugineum HOM05D005176 ORTHO05D006482 3.8e-15 85.5 65 55.4
unitig_748.g7945 Utricularia gibba HOM05D005176 ORTHO05D006482 6.5e-15 84.7 65 61.5
MCO02G403 Micromonas commoda HOM05D005176 ORTHO05D006482 8.5e-15 84.3 65 56.9
Nitab4.5_0000143g0540 Nicotiana tabacum HOM05D005176 ORTHO05D006482 8.5e-15 84.3 56 66.1
TWI38G1933 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 8.5e-15 84.3 66 62.1
PSO675G3403 Papaver somniferum HOM05D005176 ORTHO05D006482 1.9e-14 83.2 65 58.5
CDE04G3552 Ceratophyllum demersum HOM05D005176 ORTHO05D006482 1.2e-13 80.5 57 61.4
Aa31LG6G4370 Aethionema arabicum HOM05D005176 ORTHO05D006482 2.1e-13 79.7 51 68.6
Nitab4.5_0001198g0240 Nicotiana tabacum HOM05D005176 ORTHO05D006482 2.7e-13 79.3 54 61.1
MCO02G133 Micromonas commoda HOM05D005176 ORTHO05D006482 3.6e-13 79.0 69 50.7
DCAR_004870 Daucus carota HOM05D005176 ORTHO05D006482 1.0e-12 77.4 91 42.9
Peaxi162Scf00063g00213 Petunia axillaris HOM05D005176 ORTHO05D006482 1.0e-12 77.4 65 55.4
SEGI_26802 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 1.4e-12 77.0 52 63.5
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 1.8e-12 76.6 55 60.0
MBI16_g26179_MAGBIO Magnolia biondii HOM05D005176 ORTHO05D006482 3.0e-12 75.9 95 36.8
ClCG01G009770 Citrullus lanatus HOM05D005176 ORTHO05D006482 1.9e-11 73.2 54 61.1
HPP92_004744 Vanilla planifolia HOM05D005176 ORTHO05D006482 2.5e-11 72.8 47 66.0
GSVIVG01006689001 Vitis vinifera HOM05D005176 ORTHO05D006482 7.4e-11 71.2 56 51.8
Cre03.g172500 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 3.1e-09 65.9 70 48.6
PRCOL_00003826 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 3.1e-09 65.9 73 43.8
A03p53390 Brassica napus HOM05D005176 ORTHO05D006482 2.2e-07 59.7 68 50.0
AUR62021889 Chenopodium quinoa HOM05D005176 ORTHO05D006482 5.5e-06 55.1 65 43.1


User provided reference genes

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