Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 0.0e+00 1551.2 854 100.0
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.6e-20 105.1 745 23.5
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.0e-16 93.2 751 22.6
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 3.0e-16 91.7 421 24.9
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 1.5e-15 89.4 745 22.6
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 5.7e-15 87.4 741 21.7
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.7e-14 84.7 747 22.1
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 3.7e-14 84.7 465 24.1
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 4.8e-14 84.3 397 25.7
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 8.2e-14 83.6 338 25.7
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 7.0e-13 80.5 746 22.3
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 2.6e-12 78.6 300 24.7
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 4.5e-12 77.8 746 22.5
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 4.5e-12 77.8 761 22.3
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 5.9e-12 77.4 510 22.4
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.0e-11 76.6 452 24.6
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 1.3e-11 76.3 745 23.1
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 2.2e-11 75.5 312 26.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 3.8e-11 74.7 746 21.3
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 5.0e-11 74.3 746 21.3
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.4e-10 72.8 749 21.4
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.4e-10 72.8 495 22.4
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.9e-10 72.4 302 27.2
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.5e-10 72.0 747 22.1
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.5e-10 72.0 312 26.9
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 3.2e-10 71.6 748 22.3
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 3.2e-10 71.6 748 22.6
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.2e-10 71.6 745 21.5
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 4.2e-10 71.2 495 22.6
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 5.5e-10 70.9 753 23.2
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 5.5e-10 70.9 747 21.2
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 7.2e-10 70.5 743 22.3
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 9.4e-10 70.1 742 22.4
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 9.4e-10 70.1 307 24.4
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.6e-09 69.3 119 37.8
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 2.1e-09 68.9 745 23.2
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.1e-09 68.9 429 24.0
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.1e-09 68.9 429 24.0
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 4.7e-09 67.8 119 38.7
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 4.7e-09 67.8 752 23.4
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.0e-08 66.6 517 24.0
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.0e-08 66.6 506 22.5
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 1.0e-08 66.6 106 36.8
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 1.4e-08 66.2 119 34.5
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.8e-08 65.9 119 34.5
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.8e-08 65.9 453 23.8
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 2.3e-08 65.5 321 25.9
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 5.2e-08 64.3 759 20.9
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 5.2e-08 64.3 441 23.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 6.7e-08 63.9 131 34.4
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 8.8e-08 63.5 743 22.2
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.1e-07 63.2 301 24.9
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 2.0e-07 62.4 309 25.6
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 2.0e-07 62.4 460 23.0
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 2.6e-07 62.0 767 22.6
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 2.6e-07 62.0 452 21.5
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.6e-07 62.0 627 22.6
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 5.7e-07 60.8 363 25.3
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 7.4e-07 60.5 743 21.9
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 7.4e-07 60.5 302 26.2
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 9.7e-07 60.1 743 20.3
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.3e-06 59.7 338 23.4
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.2e-06 58.9 434 24.2
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 2.8e-06 58.5 148 25.7
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.8e-06 58.5 770 20.9
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 3.7e-06 58.2 387 23.0
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 3.7e-06 58.2 310 21.9
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.8e-06 57.8 750 22.0


User provided reference genes

Program Settings