Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 3.6e-286 987.6 530 100.0
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.8e-64 251.1 277 48.7
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.6e-63 248.1 276 47.5
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 1.7e-62 244.6 282 49.3
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.5e-61 241.5 269 47.6
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 6.1e-60 236.1 277 44.8
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 6.1e-60 236.1 274 48.5
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 6.1e-60 236.1 276 44.6
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 8.0e-60 235.7 284 46.8
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 6.8e-59 232.6 273 45.1
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 8.9e-59 232.3 273 45.4
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 8.9e-59 232.3 278 45.3
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 1.2e-58 231.9 269 46.5
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.2e-58 231.9 272 44.9
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 3.4e-58 230.3 277 43.3
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 3.4e-58 230.3 277 43.3
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 3.4e-58 230.3 278 47.1
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 3.4e-58 230.3 269 46.8
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 4.4e-58 229.9 270 47.0
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 5.8e-58 229.6 272 45.6
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 7.5e-58 229.2 269 45.4
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 7.5e-58 229.2 274 45.3
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 9.8e-58 228.8 276 45.7
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 9.8e-58 228.8 273 45.4
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 9.8e-58 228.8 270 45.6
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 9.8e-58 228.8 279 44.4
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 9.8e-58 228.8 275 45.5
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 9.8e-58 228.8 275 44.0
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.7e-57 228.0 278 43.5
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.2e-57 227.6 275 45.8
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 2.2e-57 227.6 273 45.4
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.2e-57 227.6 276 44.9
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 2.2e-57 227.6 269 45.4
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 2.9e-57 227.3 273 46.9
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 2.9e-57 227.3 270 44.8
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 3.7e-57 226.9 270 44.8
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 4.9e-57 226.5 275 45.8
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 8.3e-57 225.7 272 44.1
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 8.3e-57 225.7 270 44.8
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 8.3e-57 225.7 269 45.7
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.4e-56 224.9 273 45.1
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.4e-56 224.9 274 45.3
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.4e-56 224.9 273 45.8
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.4e-56 224.9 270 45.2
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 1.8e-56 224.6 277 43.7
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 2.4e-56 224.2 273 44.0
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 2.4e-56 224.2 274 44.2
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 3.2e-56 223.8 274 44.5
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 4.1e-56 223.4 273 44.3
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 4.1e-56 223.4 261 46.4
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 7.0e-56 222.6 273 44.7
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 7.0e-56 222.6 269 44.6
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.0e-56 222.6 271 44.3
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 9.2e-56 222.2 279 42.7
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 1.6e-55 221.5 273 44.3
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.6e-55 221.5 274 43.8
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.6e-55 221.5 273 44.3
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 2.0e-55 221.1 273 44.3
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 2.0e-55 221.1 280 45.4
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.0e-55 221.1 261 45.2
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 2.7e-55 220.7 269 44.6
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.7e-55 220.7 261 44.8
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 2.7e-55 220.7 274 43.8
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 6.0e-55 219.5 276 44.6
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 6.0e-55 219.5 279 43.7
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.0e-54 218.8 273 43.6
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 1.0e-54 218.8 274 44.2
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 1.3e-54 218.4 277 43.3
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 1.3e-54 218.4 273 44.0
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.3e-54 218.4 273 44.0
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.3e-54 217.6 269 45.0
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 3.0e-54 217.2 273 43.6
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 3.0e-54 217.2 276 44.6
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 3.9e-54 216.9 273 43.6
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 8.6e-54 215.7 284 43.0
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 1.1e-53 215.3 274 43.8
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.5e-53 214.9 273 46.5
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.5e-53 214.9 260 45.0
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.5e-53 214.9 308 39.9
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 2.5e-53 214.2 265 44.9
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 3.3e-53 213.8 265 44.9
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.3e-53 213.4 269 44.6
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 7.3e-53 212.6 269 43.5
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 9.5e-53 212.2 260 45.8
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.6e-52 211.5 326 40.2
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 2.8e-52 210.7 289 44.6
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 3.6e-52 210.3 268 42.9
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 8.0e-52 209.1 315 40.0
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.3e-51 207.6 261 43.7
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 5.2e-51 206.5 273 44.3
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.2e-50 205.3 289 41.2
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.5e-50 204.9 269 41.6
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 5.8e-50 203.0 261 43.3
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 3.7e-49 200.3 250 42.8
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 3.7e-49 200.3 250 45.2
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.9e-48 198.0 277 40.4
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 4.1e-48 196.8 249 44.2
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 2.1e-47 194.5 257 42.0
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 3.9e-46 190.3 274 41.2
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 8.1e-44 182.6 241 41.9
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 1.1e-43 182.2 275 41.5
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 4.9e-41 173.3 342 34.8
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.9e-40 171.4 217 43.8
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 2.4e-40 171.0 223 44.4
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 2.4e-40 171.0 255 39.6
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.0e-38 165.6 225 41.8
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.3e-38 165.2 218 40.8
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 1.6e-36 158.3 301 34.9
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 3.6e-36 157.1 273 37.7
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.1e-35 155.6 277 36.1
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 5.2e-35 153.3 269 37.9
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 6.8e-35 152.9 210 43.3
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.6e-34 151.0 375 31.7
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 5.8e-34 149.8 185 46.5
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.3e-30 138.7 197 42.6
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.5e-29 135.2 181 44.8
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 3.1e-27 127.5 116 55.2
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 2.6e-26 124.4 163 41.7
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 2.7e-15 87.8 229 27.9
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 3.0e-14 84.3 150 38.7
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 5.1e-14 83.6 92 42.4
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 9.0e-11 72.8 79 45.6
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 2.0e-10 71.6 73 43.8


User provided reference genes

Program Settings