Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 0.0e+00 2824.7 1771 100.0
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 5.3e-39 168.3 254 42.9
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 6.9e-39 167.9 216 45.8
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 9.3e-36 157.5 221 46.6
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 2.1e-35 156.4 240 43.8
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 3.5e-35 155.6 210 46.2
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 4.6e-35 155.2 223 46.2
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 6.0e-35 154.8 206 46.6
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 6.0e-35 154.8 209 46.4
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.0e-34 154.1 195 46.7
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.0e-34 154.1 223 46.2
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.3e-34 153.7 253 42.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 1.8e-34 153.3 205 46.3
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 3.0e-34 152.5 207 46.9
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 3.0e-34 152.5 239 46.9
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 3.0e-34 152.5 237 43.0
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 3.9e-34 152.1 270 40.7
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 5.1e-34 151.8 206 47.6
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 6.7e-34 151.4 263 41.4
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 6.7e-34 151.4 208 46.2
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 6.7e-34 151.4 219 44.7
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 8.7e-34 151.0 223 44.8
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 1.5e-33 150.2 218 45.4
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 1.9e-33 149.8 197 47.2
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.9e-33 149.8 209 45.9
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 2.5e-33 149.4 271 43.2
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 5.6e-33 148.3 207 46.4
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 7.4e-33 147.9 239 43.1
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 9.6e-33 147.5 157 51.0
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 1.3e-32 147.1 240 44.6
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.6e-32 146.7 208 45.2
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.6e-32 146.7 258 43.0
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 2.1e-32 146.4 226 44.2
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.8e-32 146.0 179 48.6
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 2.8e-32 146.0 216 45.4
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 3.6e-32 145.6 237 43.0
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 3.6e-32 145.6 182 48.9
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 6.2e-32 144.8 397 35.5
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 6.2e-32 144.8 232 43.1
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 8.1e-32 144.4 166 48.2
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 8.1e-32 144.4 195 45.6
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 1.1e-31 144.1 185 47.6
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-31 143.3 298 36.9
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-31 143.3 298 36.9
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 1.8e-31 143.3 176 50.6
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.4e-31 142.9 345 34.5
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 3.1e-31 142.5 304 38.8
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 4.0e-31 142.1 157 50.3
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.0e-31 142.1 349 34.4
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.0e-31 142.1 342 34.5
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 5.3e-31 141.7 176 46.0
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 5.3e-31 141.7 211 45.0
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 5.3e-31 141.7 178 44.9
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 6.9e-31 141.4 181 48.6
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 9.0e-31 141.0 261 40.6
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 9.0e-31 141.0 246 40.2
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 9.0e-31 141.0 260 38.8
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 9.0e-31 141.0 314 34.7
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 1.2e-30 140.6 339 36.6
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.2e-30 140.6 242 40.1
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 1.2e-30 140.6 347 34.9
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.5e-30 140.2 348 33.9
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.5e-30 140.2 269 41.6
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 3.4e-30 139.0 359 33.4
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 3.4e-30 139.0 181 46.4
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 4.5e-30 138.7 361 35.5
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 5.8e-30 138.3 234 42.3
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 7.6e-30 137.9 358 34.4
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 7.6e-30 137.9 273 38.1
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 1.3e-29 137.1 267 39.7
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.7e-29 136.7 361 34.9
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 1.7e-29 136.7 317 36.3
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 1.7e-29 136.7 205 45.9
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 2.2e-29 136.3 180 48.3
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 3.8e-29 135.6 253 40.7
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 4.9e-29 135.2 307 35.5
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 8.4e-29 134.4 393 33.8
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 1.1e-28 134.0 391 32.7
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 3.2e-28 132.5 275 38.2
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 3.2e-28 132.5 308 38.3
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 3.2e-28 132.5 223 40.8
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 5.5e-28 131.7 180 46.7
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 5.5e-28 131.7 181 45.9
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 5.5e-28 131.7 181 45.9
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 5.5e-28 131.7 181 45.9
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 7.1e-28 131.3 236 39.0
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 7.1e-28 131.3 236 39.0
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 3.5e-27 129.0 205 39.0
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 6.0e-27 128.3 206 40.8
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.9e-27 127.9 170 46.5
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 3.0e-26 125.9 121 53.7
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 1.5e-25 123.6 220 38.6
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.9e-25 123.2 250 40.0
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 1.9e-25 123.2 249 38.2
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 2.5e-25 122.9 182 41.8
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 2.8e-24 119.4 167 48.5
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 8.1e-24 117.9 239 36.8
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 2.0e-22 113.2 235 41.7
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 7.6e-22 111.3 202 40.1
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 2.9e-21 109.4 233 36.9
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 2.9e-21 109.4 153 47.1
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 1.1e-20 107.5 240 39.2
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 9.3e-20 104.4 194 41.2
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.8e-18 100.1 134 45.5
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 3.0e-18 99.4 180 38.3
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 5.1e-18 98.6 230 37.0
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 5.1e-18 98.6 208 39.4
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.9e-17 96.7 236 39.4
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 2.8e-16 92.8 172 48.3
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.8e-15 90.1 208 38.9
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 5.3e-15 88.6 188 30.3
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.2e-14 87.4 99 54.5
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 7.6e-14 84.7 94 55.3
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 6.5e-13 81.6 175 35.4
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.5e-12 79.7 290 30.3
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 7.9e-11 74.7 259 30.5
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 7.4e-09 68.2 208 34.1
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.2e-08 66.6 118 44.1
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 3.7e-08 65.9 88 43.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.4e-07 63.9 178 35.4


User provided reference genes

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