Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 5.2e-179 630.9 322 100.0
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 2.4e-67 260.0 339 47.8
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 7.3e-64 248.4 317 44.2
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 7.3e-64 248.4 317 44.2
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 2.8e-63 246.5 317 44.2
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 3.6e-63 246.1 317 43.2
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 8.0e-63 245.0 317 42.9
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 8.0e-63 245.0 317 42.6
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 1.8e-62 243.8 317 43.5
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 2.3e-62 243.4 319 42.0
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 4.0e-62 242.7 319 42.0
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 5.2e-62 242.3 317 43.8
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 1.2e-61 241.1 317 42.9
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 2.0e-61 240.4 319 41.7
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 2.6e-61 240.0 317 42.9
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 2.6e-61 240.0 317 42.0
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 3.4e-61 239.6 317 42.0
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 5.8e-61 238.8 338 43.2
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 2.9e-60 236.5 320 41.9
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 2.9e-60 236.5 319 43.3
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 6.4e-60 235.3 317 40.7
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 8.3e-60 235.0 327 43.4
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 1.1e-59 234.6 320 42.8
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 1.9e-59 233.8 317 42.3
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 3.2e-59 233.0 317 41.3
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 7.0e-59 231.9 321 42.7
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 7.0e-59 231.9 317 41.6
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 7.0e-59 231.9 317 41.6
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 7.0e-59 231.9 317 42.9
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 7.0e-59 231.9 323 40.6
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 9.2e-59 231.5 332 41.6
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.2e-58 231.1 317 42.0
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.2e-58 231.1 311 42.4
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.6e-58 230.7 317 42.3
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 1.6e-58 230.7 317 41.0
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.6e-58 230.7 317 42.9
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 2.0e-58 230.3 317 41.6
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 2.7e-58 229.9 317 41.3
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 2.7e-58 229.9 319 43.3
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 3.5e-58 229.6 317 41.6
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 3.5e-58 229.6 317 42.6
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 3.5e-58 229.6 318 41.5
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 3.5e-58 229.6 317 42.3
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 4.6e-58 229.2 317 42.0
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 4.6e-58 229.2 318 43.1
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 6.0e-58 228.8 317 41.6
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 7.8e-58 228.4 324 39.8
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 1.0e-57 228.0 318 42.8
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 1.0e-57 228.0 319 42.3
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 1.0e-57 228.0 319 42.3
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 1.0e-57 228.0 317 42.0
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 1.0e-57 228.0 316 41.5
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 1.3e-57 227.6 317 39.1
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 1.3e-57 227.6 318 42.5
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.3e-57 227.6 324 42.0
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.7e-57 227.3 317 42.3
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.7e-57 227.3 318 41.8
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 2.3e-57 226.9 317 42.0
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 3.0e-57 226.5 317 41.3
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 5.0e-57 225.7 317 42.6
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 5.0e-57 225.7 317 41.0
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 8.6e-57 224.9 317 41.3
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.1e-56 224.6 317 42.6
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 1.1e-56 224.6 317 39.4
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 1.9e-56 223.8 317 39.7
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 1.9e-56 223.8 317 40.1
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 1.9e-56 223.8 317 42.0
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 2.5e-56 223.4 317 38.5
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 5.6e-56 222.2 320 39.7
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 5.6e-56 222.2 317 38.8
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 5.6e-56 222.2 317 41.0
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 7.3e-56 221.9 317 39.4
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 9.5e-56 221.5 325 41.8
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 1.6e-55 220.7 317 40.4
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 1.6e-55 220.7 318 41.2
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 1.6e-55 220.7 317 40.7
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 1.6e-55 220.7 321 41.7
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 2.1e-55 220.3 317 39.7
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 2.1e-55 220.3 319 41.1
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 2.8e-55 219.9 319 39.5
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 3.6e-55 219.5 318 40.3
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 6.2e-55 218.8 311 42.1
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 6.2e-55 218.8 317 41.0
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 1.1e-54 218.0 319 39.5
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.8e-54 217.2 317 40.7
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 2.3e-54 216.9 317 40.1
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 3.1e-54 216.5 320 37.5
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 3.1e-54 216.5 322 38.2
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 4.0e-54 216.1 312 41.3
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 5.2e-54 215.7 319 39.5
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 5.2e-54 215.7 322 41.3
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 6.8e-54 215.3 318 40.6
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 8.9e-54 214.9 317 39.7
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.2e-53 214.5 360 36.9
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 1.2e-53 214.5 317 39.1
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 1.2e-53 214.5 319 39.5
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.5e-53 214.2 323 39.9
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 1.5e-53 214.2 314 39.8
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 1.5e-53 214.2 311 37.9
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.5e-53 214.2 317 41.0
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 3.4e-53 213.0 362 38.1
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 3.4e-53 213.0 317 38.5
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 3.4e-53 213.0 318 40.6
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 4.4e-53 212.6 318 39.6
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 9.8e-53 211.5 322 38.8
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 9.8e-53 211.5 318 41.5
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.3e-52 211.1 293 44.0
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 8.3e-52 208.4 326 40.2
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 1.4e-51 207.6 204 51.0
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.4e-51 207.6 343 36.4
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 2.1e-50 203.8 199 51.8
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 6.0e-50 202.2 204 50.0
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 2.5e-48 196.8 310 39.4
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 2.5e-48 196.8 199 49.2
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.6e-47 194.1 205 46.8
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 1.6e-47 194.1 298 40.9
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 2.1e-47 193.7 204 48.0
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 2.1e-47 193.7 209 46.9
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 8.1e-47 191.8 318 39.0
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 1.1e-46 191.4 321 38.6
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 2.3e-46 190.3 312 38.5
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 3.1e-46 189.9 305 38.4
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 5.2e-46 189.1 319 37.3
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 2.0e-45 187.2 299 39.1
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 4.9e-44 182.6 322 35.7
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 4.9e-44 182.6 248 41.9
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 3.9e-41 172.9 319 36.1
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 6.6e-41 172.2 237 43.5
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 1.5e-40 171.0 388 31.4
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 2.1e-39 167.2 317 36.3
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 3.1e-38 163.3 167 50.3
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 2.6e-37 160.2 317 36.9
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 1.7e-36 157.5 305 35.4
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 6.4e-36 155.6 317 34.1
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 1.1e-35 154.8 317 35.0
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 3.9e-33 146.4 228 40.4
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 5.1e-33 146.0 229 42.4
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 5.1e-33 146.0 231 41.1
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 7.3e-32 142.1 308 33.4
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 1.3e-31 141.4 237 40.1
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 4.8e-31 139.4 228 37.7
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 8.1e-31 138.7 317 32.5
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 7.6e-29 132.1 316 34.8
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 1.4e-27 127.9 161 41.6
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 1.2e-26 124.8 212 38.7
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 9.0e-22 108.6 84 63.1
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 9.9e-21 105.1 129 45.7
MCO13G544 Micromonas commoda HOM05D004518 ORTHO05D005434 2.7e-18 97.1 353 30.6
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 5.6e-16 89.4 90 44.4
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 7.4e-16 89.0 90 47.8
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 2.3e-09 67.4 132 31.8
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 1.3e-07 61.6 50 50.0


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