Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 1.5e-212 742.7 398 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 1.0e-46 191.8 251 48.2
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 3.1e-40 170.2 232 45.7
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.0e-38 165.2 255 41.6
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 1.7e-38 164.5 239 45.2
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 5.0e-38 162.9 242 42.1
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 1.4e-37 161.4 239 42.3
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 1.9e-37 161.0 235 43.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 2.5e-37 160.6 251 39.4
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 2.5e-37 160.6 251 39.4
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.5e-37 160.6 241 41.5
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 2.5e-37 160.6 223 40.8
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 3.2e-37 160.2 276 39.5
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 3.2e-37 160.2 251 39.4
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 3.2e-37 160.2 248 37.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 4.2e-37 159.8 239 42.7
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 7.2e-37 159.1 251 39.4
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.6e-36 157.9 240 41.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.1e-36 157.5 221 42.1
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 2.1e-36 157.5 240 40.0
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.7e-36 157.1 270 39.3
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.7e-36 157.1 231 42.0
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 4.6e-36 156.4 218 42.7
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 6.1e-36 156.0 266 39.5
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 6.1e-36 156.0 238 40.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 6.1e-36 156.0 250 38.0
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 7.9e-36 155.6 252 38.9
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 7.9e-36 155.6 243 40.7
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 7.9e-36 155.6 239 40.6
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.0e-35 155.2 242 38.4
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 1.4e-35 154.8 239 41.4
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.4e-35 154.8 239 42.3
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.8e-35 154.5 239 40.2
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.8e-35 154.5 237 41.4
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.9e-35 153.3 237 41.8
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 8.8e-35 152.1 225 39.6
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 8.8e-35 152.1 237 38.4
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 8.8e-35 152.1 244 39.3
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 1.1e-34 151.8 257 41.6
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.5e-34 151.4 257 41.2
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.5e-34 151.4 223 38.1
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 1.5e-34 151.4 246 40.7
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.5e-34 151.4 239 39.7
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 2.0e-34 151.0 252 39.3
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.5e-34 150.6 239 38.9
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 2.5e-34 150.6 239 39.7
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 2.5e-34 150.6 240 39.6
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.5e-34 150.6 230 40.9
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 5.7e-34 149.4 223 38.1
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 5.7e-34 149.4 253 36.8
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 5.7e-34 149.4 252 39.7
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 5.7e-34 149.4 232 40.5
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 5.7e-34 149.4 238 38.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 7.4e-34 149.1 260 39.2
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 7.4e-34 149.1 239 39.3
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 9.7e-34 148.7 243 38.7
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 9.7e-34 148.7 249 39.0
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.3e-33 148.3 278 36.7
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 1.7e-33 147.9 232 41.4
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 2.2e-33 147.5 239 40.2
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.2e-33 147.5 266 39.5
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 2.8e-33 147.1 280 37.1
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 4.8e-33 146.4 230 40.0
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 4.8e-33 146.4 277 36.5
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 8.2e-33 145.6 244 40.6
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.4e-32 144.1 275 36.7
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 6.9e-32 142.5 266 39.1
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 9.1e-32 142.1 273 37.0
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 1.5e-31 141.4 264 37.1
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.5e-31 141.4 290 36.9
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 5.9e-31 139.4 272 38.2
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 2.9e-30 137.1 231 41.1
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 3.8e-30 136.7 230 41.3
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 1.9e-29 134.4 253 39.9
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 5.5e-29 132.9 308 33.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 7.2e-29 132.5 206 41.3
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 3.6e-28 130.2 234 38.5
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.7e-28 129.8 239 36.8
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 2.3e-27 127.5 203 38.9
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 3.0e-27 127.1 277 35.0
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 6.7e-27 125.9 220 38.2
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.1e-26 125.2 270 35.6
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 1.1e-26 125.2 243 34.2
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.5e-26 124.8 221 38.0
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 2.0e-26 124.4 240 36.2
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 9.7e-26 122.1 200 39.0
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.7e-25 120.2 270 36.3
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 8.2e-25 119.0 244 36.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.8e-24 117.9 219 36.5
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.1e-24 117.1 239 34.7
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 4.1e-24 116.7 242 36.8
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-23 115.2 193 37.8
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 2.6e-23 114.0 188 39.4
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 2.6e-23 114.0 260 35.8
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.0e-22 112.1 255 34.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.7e-22 111.3 255 33.7
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.7e-22 111.3 255 33.7
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 2.2e-22 110.9 144 44.4
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.3e-19 100.9 214 36.4
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 4.0e-19 100.1 218 34.9
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 3.3e-18 97.1 125 42.4
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 9.1e-16 89.0 134 43.3
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.0e-14 85.5 115 41.7
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 1.7e-14 84.7 128 40.6
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.7e-12 77.4 100 45.0
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.6e-12 77.0 94 43.6
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 3.6e-12 77.0 101 46.5
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.0e-11 75.5 120 40.8
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.3e-11 74.3 148 37.2
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 5.2e-11 73.2 238 29.4
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.9e-06 57.4 121 38.0
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 6.5e-06 56.2 83 39.8


User provided reference genes

Program Settings