Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g11009 Chara braunii HOM05D009714 ORTHO05D014804 0.0e+00 2126.7 1114 100.0
AagrBONN_evm.TU.Sc2ySwM_368.943 Anthoceros agrestis HOM05D009714 ORTHO05D014804 6.7e-133 479.6 1001 37.0
PRCOL_00003224 Prasinoderma coloniale HOM05D009714 ORTHO05D014804 5.6e-55 220.7 378 37.0
CBR_g36497 Chara braunii HOM05D009714 ORTHO05D014804 2.7e-33 148.7 251 33.9
CBR_g31330 Chara braunii HOM05D000409 ORTHO05D014804 4.6e-33 147.9 249 32.9
CBR_g29540 Chara braunii HOM05D009714 ORTHO05D014804 3.0e-32 145.2 254 33.9
AagrBONN_evm.TU.Sc2ySwM_228.3578 Anthoceros agrestis HOM05D009714 ORTHO05D014804 2.1e-30 139.0 258 33.3
Cre10.g425300 Chlamydomonas reinhardtii HOM05D009714 ORTHO05D014804 3.1e-29 135.2 244 35.7
CBR_g32415 Chara braunii HOM05D009714 ORTHO05D014813 2.2e-27 129.0 243 29.6
PRCOL_00002510 Prasinoderma coloniale HOM05D009714 ORTHO05D004743 3.9e-24 118.2 386 28.2
Cre06.g278168 Chlamydomonas reinhardtii HOM05D009714 ORTHO05D014804 6.7e-24 117.5 287 28.2
MCO02G243 Micromonas commoda HOM05D009714 ORTHO05D014804 3.3e-23 115.2 232 32.8
Pp3c5_14730 Physcomitrium patens HOM05D009714 ORTHO05D014813 6.3e-22 110.9 243 28.8
Cre06.g266800 Chlamydomonas reinhardtii HOM05D009714 ORTHO05D014804 2.0e-20 105.9 235 29.8
Mapoly0098s0039 Marchantia polymorpha HOM05D009714 ORTHO05D014813 2.0e-20 105.9 225 29.8
PRCOL_00000022 Prasinoderma coloniale HOM05D009714 ORTHO05D014804 3.9e-16 91.7 379 23.7
MCO16G100 Micromonas commoda HOM05D009714 ORTHO05D014813 8.5e-11 73.9 176 26.1
vmacro12957 Vaccinium macrocarpon HOM05D001481 ORTHO05D001865 8.8e-08 63.9 264 26.9
HPP92_026980 Vanilla planifolia HOM05D001481 ORTHO05D001865 8.8e-08 63.9 222 27.9
SEGI_14003 Sequoiadendron giganteum HOM05D001481 ORTHO05D001865 3.3e-07 62.0 254 26.8
Lsat_1_v5_gn_9_19881 Lactuca sativa HOM05D001481 ORTHO05D001865 4.4e-07 61.6 255 25.9
PGR010G0005 Punica granatum HOM05D001481 ORTHO05D001865 5.7e-07 61.2 257 26.1
PGR119G0367 Punica granatum HOM05D001481 ORTHO05D001865 5.7e-07 61.2 257 26.1
HPP92_015416 Vanilla planifolia HOM05D001481 ORTHO05D001865 7.4e-07 60.8 222 27.5
arahy.Tifrunner.gnm1.ann1.42WI7N Arachis hypogaea HOM05D001481 ORTHO05D001865 9.7e-07 60.5 283 25.8
arahy.Tifrunner.gnm1.ann1.Y8KTYY Arachis hypogaea HOM05D001481 ORTHO05D001865 9.7e-07 60.5 283 25.8
Phvul.006G069300 Phaseolus vulgaris HOM05D001481 ORTHO05D001865 9.7e-07 60.5 284 26.8
SEGI_33651 Sequoiadendron giganteum HOM05D001481 ORTHO05D001865 9.7e-07 60.5 254 26.8
Cre12.g521400 Chlamydomonas reinhardtii HOM05D009714 ORTHO05D014813 1.3e-06 60.1 170 24.7
Haze_24354 Corylus avellana HOM05D001481 ORTHO05D001865 1.3e-06 60.1 159 29.6
CsaV3_6G031950 Cucumis sativus L. HOM05D001481 ORTHO05D001865 1.3e-06 60.1 220 27.7
Nn2g14498 Nelumbo nucifera HOM05D001481 ORTHO05D001865 1.3e-06 60.1 279 27.6
A06p27160 Brassica napus HOM05D001481 ORTHO05D001865 1.7e-06 59.7 256 25.4
BraA06t25655Z Brassica rapa HOM05D001481 ORTHO05D001865 1.7e-06 59.7 256 25.4
CBR_g4450 Chara braunii HOM05D001481 ORTHO05D001865 1.7e-06 59.7 261 24.5
PRCOL_00005220 Prasinoderma coloniale HOM05D001481 ORTHO05D001865 1.7e-06 59.7 254 27.6
Cc01_g14420 Coffea canephora HOM05D001481 ORTHO05D001865 2.2e-06 59.3 261 25.7
MELO3C011485.2 Cucumis melo HOM05D001481 ORTHO05D001865 2.2e-06 59.3 220 26.8
Gohir.D09G088800 Gossypium hirsutum HOM05D001481 ORTHO05D001865 2.2e-06 59.3 235 26.0
Gorai.006G105200 Gossypium raimondii HOM05D001481 ORTHO05D001865 2.2e-06 59.3 235 26.0
PSO801G0392 Papaver somniferum HOM05D001481 ORTHO05D001865 2.2e-06 59.3 258 26.7
ClCG02G019460 Citrullus lanatus HOM05D001481 ORTHO05D001865 2.8e-06 58.9 220 27.3
MELO3C026828.2 Cucumis melo HOM05D001481 ORTHO05D001865 2.8e-06 58.9 220 27.3
BcaB01g00935 Brassica carinata HOM05D001481 ORTHO05D001865 3.7e-06 58.5 261 24.5
BcaC01g02190 Brassica carinata HOM05D001481 ORTHO05D001865 3.7e-06 58.5 255 24.3
C03p67270 Brassica napus HOM05D001481 ORTHO05D001865 3.7e-06 58.5 255 24.3
BolSC21t60298H Brassica oleracea HOM05D001481 ORTHO05D001865 3.7e-06 58.5 255 24.3
Migut.N00774 Erythranthe guttata HOM05D001481 ORTHO05D001865 3.7e-06 58.5 240 26.2
Manes.02G212800 Manihot esculenta HOM05D001481 ORTHO05D001865 3.7e-06 58.5 254 24.8
Oeu001785.1 Olea europaea HOM05D001481 ORTHO05D001865 3.7e-06 58.5 311 26.0
QL06p049538 Quercus lobata HOM05D001481 ORTHO05D001865 3.7e-06 58.5 266 25.6
Rhsim10G0163100 Rhododendron simsii HOM05D001481 ORTHO05D001865 3.7e-06 58.5 284 26.4
VMungo0540G0522 Vigna mungo HOM05D001481 ORTHO05D001865 3.7e-06 58.5 279 25.4
AagrBONN_evm.TU.Sc2ySwM_344.215 Anthoceros agrestis HOM05D001481 ORTHO05D001865 4.8e-06 58.2 254 25.2
Ciclev10028078m.g Citrus clementina HOM05D001481 ORTHO05D001865 4.8e-06 58.2 254 25.2
Gohir.A09G088900 Gossypium hirsutum HOM05D001481 ORTHO05D001865 4.8e-06 58.2 235 25.5
Sp5g14540 Schrenkiella parvula HOM05D001481 ORTHO05D001865 4.8e-06 58.2 261 24.5
Zm00001eb163240 Zea mays HOM05D001481 ORTHO05D001865 4.8e-06 58.2 223 29.1
COL.COLO4_19191 Corchorus olitorius HOM05D001481 ORTHO05D001865 6.3e-06 57.8 254 25.2
CsaV3_6G016090 Cucumis sativus L. HOM05D001481 ORTHO05D001865 6.3e-06 57.8 217 27.2
Glyma.18G061100 Glycine max HOM05D001481 ORTHO05D001865 6.3e-06 57.8 279 26.5
PSO339G2151 Papaver somniferum HOM05D001481 ORTHO05D001865 6.3e-06 57.8 257 26.8
SalBow2G2063 Salvia bowleyana HOM05D001481 ORTHO05D001865 6.3e-06 57.8 256 25.4
CiPaw.04G099400 Carya illinoinensis HOM05D001481 ORTHO05D001865 8.2e-06 57.4 258 26.0
Ca_14959_v3 Cicer arietinum L. HOM05D001481 ORTHO05D001865 8.2e-06 57.4 254 24.8
HanXRQChr08g0229331 Helianthus annuus HOM05D001481 ORTHO05D001865 8.2e-06 57.4 254 25.6
GSVIVG01024713001 Vitis vinifera HOM05D001481 ORTHO05D001865 8.2e-06 57.4 283 25.1


User provided reference genes

Program Settings