Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g10945 Chara braunii HOM05D000059 ORTHO05D137461 2.4e-30 134.8 65 100.0
Nn7g37296 Nelumbo nucifera HOM05D000059 ORTHO05D009759 3.3e-08 61.2 46 58.7
SMO353G0224 Selaginella moellendorffii HOM05D000059 ORTHO05D009759 2.8e-07 58.2 46 54.3
ATR0307G069 Amborella trichopoda HOM05D000059 ORTHO05D009759 3.7e-07 57.8 47 51.1
HPP92_017887 Vanilla planifolia HOM05D000059 ORTHO05D009759 3.7e-07 57.8 46 54.3
Oeu013046.1 Olea europaea HOM05D000059 ORTHO05D009759 6.3e-07 57.0 46 50.0
Phvul.011G186900 Phaseolus vulgaris HOM05D000059 ORTHO05D009759 6.3e-07 57.0 46 52.2
VMungo1127G1077 Vigna mungo HOM05D000059 ORTHO05D009759 6.3e-07 57.0 46 52.2
CANSAT11G0801 Cannabis sativa HOM05D000059 ORTHO05D009759 8.2e-07 56.6 46 54.3
Lj3g0014051 Lotus japonicus HOM05D000059 ORTHO05D009759 8.2e-07 56.6 46 54.3
PGR142G1020 Punica granatum HOM05D000059 ORTHO05D009759 8.2e-07 56.6 46 54.3
SalBow6G6738 Salvia bowleyana HOM05D000059 ORTHO05D009759 8.2e-07 56.6 46 50.0
arahy.Tifrunner.gnm1.ann1.DT2ZPD Arachis hypogaea HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 50.0
arahy.Tifrunner.gnm1.ann1.R5AJY0 Arachis hypogaea HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 50.0
Migut.N01872 Erythranthe guttata HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 47.8
MBI19_g28108_MAGBIO Magnolia biondii HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 50.0
Rhsim07G0072600 Rhododendron simsii HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 50.0
vmacro13792 Vaccinium macrocarpon HOM05D000059 ORTHO05D009759 1.4e-06 55.8 46 50.0
Actinidia12137 Actinidia chinensis HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
CiPaw.13G047900 Carya illinoinensis HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
COL.COLO4_07153 Corchorus olitorius HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 47.8
Eucgr.G02633 Eucalyptus grandis HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
Hma1.2p1_0233F.1_g098010 Hydrangea macrophylla HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 52.2
Sabra10G0192800 Salix brachista HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
Solyc01g096820.4 Solanum lycopersicum HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
Sopen01g040520 Solanum pennellii HOM05D000059 ORTHO05D009759 1.8e-06 55.5 46 50.0
CAN.G134.45 Capsicum annuum HOM05D000059 ORTHO05D009759 2.4e-06 55.1 46 50.0
PGSC0003DMG400027527 Solanum tuberosum HOM05D000059 ORTHO05D009759 2.4e-06 55.1 46 50.0
DCAR_023134 Daucus carota HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 52.2
FvH4_5g27182 Fragaria vesca HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
FAN08G3269 Fragaria x ananassa HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
FAN18G2260 Fragaria x ananassa HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
Glyma.15G222300 Glycine max HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 50.0
MD07G1053900 Malus domestica HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
PSO339G3396 Papaver somniferum HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
RcHm_v2.0_Chr7g0218291 Rosa chinensis HOM05D000059 ORTHO05D009759 3.1e-06 54.7 46 47.8
Atru.chr12.1136 Acer truncatum HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 47.8
Aqoxy1G04298 Aquilegia oxysepala HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 52.2
Dinv02047 Davidia involucrata HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 50.0
Duzib114G0502 Durio zibethinus HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 47.8
Glyma.08G227200 Glycine max HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 50.0
Manes.10G063500 Manihot esculenta HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 50.0
Potri.010G247400 Populus trichocarpa HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 47.8
Thecc.10G130400 Theobroma cacao HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 47.8
TAR633G1052 Trochodendron aralioides HOM05D000059 ORTHO05D009759 4.1e-06 54.3 46 50.0
Cc08_g09570 Coffea canephora HOM05D000059 ORTHO05D009759 5.3e-06 53.9 46 50.0
Haze_03394 Corylus avellana HOM05D000059 ORTHO05D009759 5.3e-06 53.9 46 50.0
PSO384G3320 Papaver somniferum HOM05D000059 ORTHO05D009759 5.3e-06 53.9 46 45.7
Peaxi162Scf00647g00529 Petunia axillaris HOM05D000059 ORTHO05D009759 5.3e-06 53.9 46 47.8
CSS0013163 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 6.9e-06 53.5 46 47.8
CSS0038335 Camellia sinensis var. sinensis HOM05D000059 ORTHO05D009759 6.9e-06 53.5 46 47.8
Haze_03390 Corylus avellana HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 50.0
DCAR_011576 Daucus carota HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 47.8
Gorai.N006600 Gossypium raimondii HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 47.8
Os05g0489900 Oryza sativa ssp. japonica HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 47.8
Potri.008G011541 Populus trichocarpa HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 47.8
Sed0015296 Sechium edule HOM05D000059 ORTHO05D009759 9.0e-06 53.1 46 47.8


User provided reference genes

Program Settings