Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 0.0e+00 1138.3 600 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 1.5e-57 228.4 395 38.0
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 7.4e-54 216.1 401 37.2
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 4.1e-52 210.3 383 37.6
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 7.2e-49 199.5 398 35.7
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 5.2e-47 193.4 401 32.4
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 6.8e-47 193.0 395 37.0
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 4.4e-46 190.3 396 32.8
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.8e-45 187.6 387 34.1
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 4.8e-45 186.8 394 34.5
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 8.3e-45 186.0 394 36.0
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.2e-43 182.2 392 34.4
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 2.7e-43 181.0 386 33.2
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 2.7e-43 181.0 409 30.8
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.5e-43 180.6 390 33.1
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 4.5e-43 180.3 397 34.0
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.3e-42 178.7 393 31.6
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 2.2e-42 177.9 409 31.1
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 2.9e-42 177.6 397 32.5
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 2.9e-42 177.6 403 34.0
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 3.8e-42 177.2 387 31.8
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 5.0e-42 176.8 399 32.1
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 8.5e-42 176.0 390 33.1
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 1.5e-41 175.3 396 33.6
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 1.5e-41 175.3 384 33.1
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 1.5e-41 175.3 385 33.8
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 1.9e-41 174.9 393 33.3
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 2.5e-41 174.5 391 32.0
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 3.2e-41 174.1 416 31.2
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 4.2e-41 173.7 404 32.2
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 5.5e-41 173.3 388 33.5
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 7.2e-41 172.9 398 33.4
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 7.2e-41 172.9 394 31.0
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 9.4e-41 172.6 397 31.5
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 1.2e-40 172.2 397 31.5
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 2.1e-40 171.4 392 32.4
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 4.7e-40 170.2 396 32.6
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 4.7e-40 170.2 385 33.5
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 4.7e-40 170.2 396 30.3
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 4.7e-40 170.2 387 33.9
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.0e-39 169.1 393 31.6
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.4e-39 168.7 405 32.1
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 1.4e-39 168.7 385 33.8
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 1.4e-39 168.7 387 31.8
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 1.8e-39 168.3 396 30.6
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.8e-39 168.3 281 37.4
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 2.3e-39 167.9 384 31.5
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.3e-39 167.9 406 31.3
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 3.0e-39 167.5 393 31.6
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 3.0e-39 167.5 395 33.4
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 4.0e-39 167.2 397 33.8
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 4.0e-39 167.2 405 33.3
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 5.2e-39 166.8 391 33.0
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 8.8e-39 166.0 393 32.3
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 8.8e-39 166.0 391 32.5
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 8.8e-39 166.0 391 32.7
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 8.8e-39 166.0 373 33.2
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.2e-38 165.6 386 31.6
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 1.5e-38 165.2 401 31.9
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 2.6e-38 164.5 397 32.7
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 4.4e-38 163.7 399 29.8
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 5.7e-38 163.3 401 31.7
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 5.7e-38 163.3 408 32.6
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 7.5e-38 162.9 404 32.2
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 9.8e-38 162.5 405 32.1
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.3e-37 162.2 397 33.0
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 1.7e-37 161.8 405 31.4
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 1.7e-37 161.8 412 32.0
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 2.8e-37 161.0 398 31.7
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 3.7e-37 160.6 405 32.8
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 4.9e-37 160.2 393 31.8
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 4.9e-37 160.2 394 31.0
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 4.9e-37 160.2 385 33.8
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 6.3e-37 159.8 369 32.8
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 6.3e-37 159.8 398 33.2
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 6.3e-37 159.8 276 37.0
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 6.3e-37 159.8 271 37.3
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 1.1e-36 159.1 405 31.4
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 1.4e-36 158.7 391 33.0
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.8e-36 158.3 403 31.0
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 1.8e-36 158.3 391 31.7
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 2.4e-36 157.9 386 33.4
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 2.4e-36 157.9 395 31.1
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 4.1e-36 157.1 394 31.0
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 5.4e-36 156.8 383 32.9
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 7.0e-36 156.4 325 34.5
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 7.0e-36 156.4 271 36.2
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.2e-35 155.6 380 32.9
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 1.2e-35 155.6 233 39.9
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 1.6e-35 155.2 429 30.8
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 4.5e-35 153.7 316 34.5
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 7.7e-35 152.9 273 37.0
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 7.7e-35 152.9 380 31.6
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.9e-33 148.3 316 32.0
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 4.2e-33 147.1 322 33.9
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 9.5e-33 146.0 316 32.0
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 8.0e-32 142.9 316 31.6
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 7.5e-30 136.3 315 32.7
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 6.3e-29 133.3 387 29.2
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 3.5e-27 127.5 320 30.3
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 4.6e-27 127.1 464 26.9
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 7.8e-27 126.3 263 32.7
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 3.3e-25 120.9 380 28.7
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.2e-24 119.0 229 37.1
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 6.1e-24 116.7 383 28.5
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.6e-19 102.1 242 31.8
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 7.3e-17 93.2 323 29.1
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.1e-16 91.7 127 41.7
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 2.3e-15 88.2 368 25.5
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 3.4e-14 84.3 114 40.4
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 2.8e-08 64.7 122 36.1


User provided reference genes

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