Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 1.6e-182 642.9 330 100.0
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 7.9e-41 172.2 259 38.6
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 2.0e-39 167.5 227 43.2
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 3.7e-30 136.7 226 36.3
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 3.1e-29 133.7 237 35.4
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.2e-28 131.7 237 35.0
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 2.6e-28 130.6 216 38.4
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.5e-28 130.2 233 33.9
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 5.9e-28 129.4 231 36.8
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.7e-27 127.9 235 35.7
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 2.9e-27 127.1 227 35.2
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 3.8e-27 126.7 235 35.3
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 6.5e-27 125.9 227 35.2
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 8.5e-27 125.6 244 36.5
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 8.5e-27 125.6 229 34.1
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-26 125.2 240 33.3
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 1.1e-26 125.2 226 35.8
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.9e-26 124.4 245 32.7
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 1.9e-26 124.4 225 35.1
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 2.5e-26 124.0 232 35.3
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.5e-26 124.0 248 33.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 3.2e-26 123.6 241 34.0
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 4.2e-26 123.2 245 30.2
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.2e-26 123.2 233 33.5
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 4.2e-26 123.2 231 33.8
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 4.2e-26 123.2 237 35.9
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 5.5e-26 122.9 228 34.6
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 5.5e-26 122.9 234 35.5
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 5.5e-26 122.9 234 35.5
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 7.2e-26 122.5 233 33.5
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 7.2e-26 122.5 236 34.3
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 9.4e-26 122.1 230 34.3
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 9.4e-26 122.1 242 35.1
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 9.4e-26 122.1 221 33.9
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 1.6e-25 121.3 236 31.8
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.6e-25 121.3 229 33.6
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.6e-25 121.3 228 32.9
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 2.7e-25 120.6 227 34.4
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 3.6e-25 120.2 229 34.5
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 3.6e-25 120.2 211 36.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 3.6e-25 120.2 229 31.4
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.6e-25 120.2 228 33.3
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 4.7e-25 119.8 210 35.2
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 6.1e-25 119.4 228 34.2
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 6.1e-25 119.4 233 34.8
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 8.0e-25 119.0 224 33.9
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.0e-24 118.6 233 32.6
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 1.4e-24 118.2 234 36.3
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.4e-24 118.2 229 34.1
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.4e-24 118.2 226 32.7
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.4e-24 118.2 224 33.0
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.8e-24 117.9 224 33.9
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.8e-24 117.9 229 33.2
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 2.3e-24 117.5 210 33.8
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 2.3e-24 117.5 209 34.9
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.0e-24 117.1 239 33.1
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 4.0e-24 116.7 232 33.6
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 5.2e-24 116.3 256 33.2
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 5.2e-24 116.3 223 33.2
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 5.2e-24 116.3 235 32.3
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 5.2e-24 116.3 233 31.3
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 5.2e-24 116.3 221 33.9
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 6.7e-24 115.9 226 33.2
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 6.7e-24 115.9 229 33.6
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 6.7e-24 115.9 223 35.9
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 8.8e-24 115.5 233 31.8
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 1.2e-23 115.2 212 35.4
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 1.5e-23 114.8 226 31.0
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.5e-23 114.8 240 33.3
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 2.0e-23 114.4 226 32.7
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 2.0e-23 114.4 226 33.2
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.0e-23 114.4 223 32.7
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 2.0e-23 114.4 227 30.4
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 2.6e-23 114.0 226 33.2
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 3.3e-23 113.6 203 35.5
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 5.7e-23 112.8 224 33.9
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 9.7e-23 112.1 204 33.3
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.3e-22 111.7 213 29.6
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.7e-22 111.3 231 32.5
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 2.2e-22 110.9 230 33.0
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 3.7e-22 110.2 205 35.6
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 8.2e-22 109.0 228 33.3
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.4e-21 107.5 223 32.3
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 2.4e-21 107.5 231 31.6
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.1e-21 106.7 160 36.9
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.7e-20 104.0 247 31.2
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 3.5e-20 103.6 100 47.0
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 7.7e-20 102.4 215 36.3
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 3.8e-19 100.1 86 53.5
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 3.8e-19 100.1 254 29.9
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 6.5e-19 99.4 255 29.8
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 6.5e-19 99.4 178 34.3
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.5e-18 98.2 224 29.9
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 3.2e-18 97.1 223 30.0
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 3.2e-18 97.1 217 34.1
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 1.2e-17 95.1 219 31.1
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 2.1e-17 94.4 86 50.0
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.1e-17 92.8 230 29.6
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.5e-15 88.2 63 58.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.6e-15 87.4 290 26.9
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 4.4e-15 86.7 63 57.1
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 4.8e-14 83.2 205 30.2
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 1.1e-13 82.0 237 28.7
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.4e-13 81.6 173 37.0
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.8e-13 81.3 66 54.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 3.1e-13 80.5 203 29.1
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 4.1e-13 80.1 198 29.8
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 2.0e-12 77.8 243 30.0
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.7e-11 74.7 279 26.9
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 6.6e-11 72.8 269 25.3
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 5.5e-10 69.7 190 28.4
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 7.2e-10 69.3 273 24.9
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 3.6e-09 67.0 174 29.3
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 8.9e-08 62.4 86 37.2
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 2.2e-06 57.8 222 27.0


User provided reference genes

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