Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 8.1e-64 246.9 123 100.0
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 3.1e-55 218.4 123 87.8
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 5.2e-55 217.6 123 90.2
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.5e-54 216.1 123 88.6
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 6.4e-53 210.7 123 86.2
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 6.4e-53 210.7 123 86.2
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 8.4e-53 210.3 123 85.4
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 1.9e-52 209.1 123 85.4
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.9e-52 209.1 123 85.4
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 3.2e-52 208.4 123 85.4
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 7.4e-41 170.6 123 69.9
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 6.9e-39 164.1 123 68.3
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 1.5e-38 162.9 123 65.9
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.3e-37 159.8 123 64.2
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.3e-37 159.8 123 64.2
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 1.7e-37 159.5 123 63.4
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 1.7e-37 159.5 123 64.2
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 1.7e-37 159.5 123 63.4
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.8e-37 158.3 123 65.0
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 3.8e-37 158.3 123 65.0
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 4.9e-37 157.9 123 63.4
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 8.4e-37 157.1 123 64.2
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.9e-36 156.0 123 63.4
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.4e-36 155.6 123 64.2
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 3.2e-36 155.2 123 61.8
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 4.2e-36 154.8 123 61.8
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 4.2e-36 154.8 123 63.4
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 4.2e-36 154.8 123 64.2
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 4.2e-36 154.8 123 64.2
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 7.1e-36 154.1 123 61.0
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 7.1e-36 154.1 124 65.3
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 9.3e-36 153.7 123 62.6
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 9.3e-36 153.7 123 61.8
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 9.3e-36 153.7 123 62.6
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 9.3e-36 153.7 123 62.6
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 9.3e-36 153.7 123 61.8
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 1.6e-35 152.9 123 61.0
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 2.1e-35 152.5 137 58.4
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 2.1e-35 152.5 123 61.8
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 2.1e-35 152.5 123 63.4
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 2.7e-35 152.1 123 61.0
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 3.5e-35 151.8 123 61.8
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 2.3e-34 149.1 123 62.6
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 2.3e-34 149.1 123 62.6
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 8.7e-34 147.1 123 61.8
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 1.1e-33 146.7 123 58.5
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.5e-33 146.4 123 58.5
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 1.9e-33 146.0 123 60.2
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 4.3e-33 144.8 123 58.5
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 5.6e-33 144.4 123 59.3
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 5.6e-33 144.4 123 60.2
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 9.6e-33 143.7 123 60.2
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.3e-32 143.3 123 60.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 1.6e-32 142.9 123 57.7
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.6e-32 142.9 122 57.4
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 2.1e-32 142.5 123 56.9
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 2.1e-32 142.5 123 56.9
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 2.8e-32 142.1 123 57.7
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 2.8e-32 142.1 123 57.7
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 2.8e-32 142.1 123 60.2
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 3.7e-32 141.7 123 57.7
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 4.8e-32 141.4 123 59.3
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 6.2e-32 141.0 123 59.3
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 8.2e-32 140.6 123 56.9
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 8.2e-32 140.6 122 56.6
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 1.1e-31 140.2 123 56.9
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 1.4e-31 139.8 123 56.9
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.8e-31 139.4 123 59.3
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 5.3e-31 137.9 123 56.1
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 9.0e-31 137.1 123 53.7
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 1.2e-30 136.7 110 69.1
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 3.4e-30 135.2 123 55.3
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 4.5e-30 134.8 123 57.7
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 5.8e-30 134.4 123 55.3
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.6e-30 134.0 123 55.3
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.3e-29 133.3 123 53.7
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.3e-29 133.3 123 52.0
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 5.5e-28 127.9 101 64.4
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 5.5e-28 127.9 104 60.6
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 7.1e-28 127.5 123 51.2
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 4.6e-27 124.8 98 58.2
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 7.9e-27 124.0 123 51.2
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 7.9e-27 124.0 100 62.0
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.5e-25 119.0 126 52.4
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 2.5e-25 119.0 98 61.2
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 6.3e-24 114.4 121 52.1
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.4e-23 113.2 71 78.9
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 3.2e-20 102.1 121 46.3
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 5.5e-20 101.3 78 64.1
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 2.7e-19 99.0 90 48.9
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 6.3e-16 87.8 57 73.7
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.5e-14 83.2 59 66.1
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 2.6e-14 82.4 97 46.4
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 5.9e-14 81.3 79 57.0
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 7.7e-14 80.9 117 40.2
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 2.1e-11 72.8 37 91.9
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 5.1e-10 68.2 65 52.3
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 1.5e-09 66.6 138 31.2
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 5.3e-07 58.2 65 46.2


User provided reference genes

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