Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 2.4e-253 878.2 421 100.0
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 2.5e-221 771.9 401 90.8
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 2.3e-219 765.4 401 89.8
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 1.1e-216 756.5 401 87.8
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 3.1e-216 755.0 401 89.0
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 3.1e-216 755.0 401 88.3
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 1.1e-213 746.5 402 88.8
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 3.2e-213 745.0 401 86.0
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 1.4e-211 739.6 402 87.6
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 4.0e-211 738.0 402 87.6
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 1.1e-208 729.9 418 84.4
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 1.2e-175 620.2 401 70.8
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 5.0e-174 614.8 399 69.9
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 5.0e-174 614.8 401 71.3
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 6.6e-174 614.4 402 70.9
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 3.3e-173 612.1 399 71.7
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 5.6e-173 611.3 396 70.7
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 6.8e-171 604.4 402 71.1
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 3.4e-170 602.1 401 69.6
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 5.8e-170 601.3 402 71.1
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 9.9e-170 600.5 415 67.5
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 1.7e-169 599.7 449 63.3
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 8.3e-169 597.4 410 69.5
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.4e-168 596.7 399 69.4
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 1.4e-168 596.7 420 65.7
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 7.1e-168 594.3 397 70.0
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 1.2e-167 593.6 407 68.8
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 4.6e-167 591.7 419 65.6
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 6.0e-167 591.3 396 71.0
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 6.0e-167 591.3 411 67.2
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 7.8e-167 590.9 398 70.4
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 1.0e-166 590.5 401 68.8
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.7e-166 589.7 396 68.7
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 5.1e-166 588.2 397 70.0
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 8.6e-166 587.4 388 68.6
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 1.1e-165 587.0 405 66.9
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 1.9e-165 586.3 396 69.2
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 2.5e-165 585.9 417 65.9
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 3.3e-165 585.5 398 67.6
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 4.3e-165 585.1 414 65.9
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 2.8e-164 582.4 396 67.9
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 4.7e-164 581.6 400 67.0
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 8.1e-164 580.9 411 65.7
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 1.4e-163 580.1 388 68.6
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 1.8e-163 579.7 395 68.6
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 1.8e-163 579.7 398 68.6
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 4.0e-163 578.6 400 67.8
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 5.2e-163 578.2 413 65.1
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 5.2e-163 578.2 400 67.0
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 1.2e-162 577.0 399 67.7
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 4.4e-162 575.1 408 65.2
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 5.8e-162 574.7 400 67.2
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 2.2e-161 572.8 398 66.1
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 2.2e-161 572.8 398 66.1
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 6.4e-161 571.2 396 66.9
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 8.4e-161 570.9 398 66.1
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 9.2e-160 567.4 397 65.7
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 9.2e-160 567.4 397 65.2
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 1.3e-158 563.5 421 63.9
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 3.0e-158 562.4 402 64.9
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 5.1e-158 561.6 398 65.1
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.5e-157 560.1 397 63.5
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 1.9e-157 559.7 380 68.9
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 1.2e-156 557.0 371 69.0
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 1.6e-156 556.6 397 65.2
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 2.4e-155 552.7 336 75.3
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.1e-155 552.4 397 65.5
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 9.0e-155 550.8 391 65.2
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 2.6e-154 549.3 397 65.2
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 7.6e-154 547.7 403 65.0
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 4.9e-153 545.0 401 63.1
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 1.4e-152 543.5 391 64.2
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 1.4e-152 543.5 438 60.3
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.1e-151 539.7 398 64.3
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 2.1e-151 539.7 393 63.9
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 7.8e-151 537.7 399 62.9
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.3e-150 536.2 402 65.4
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 9.6e-149 530.8 325 73.2
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 6.0e-143 511.5 418 57.9
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 1.3e-142 510.4 412 60.7
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.9e-142 508.8 401 61.8
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 4.8e-140 501.9 355 66.2
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 8.1e-140 501.1 341 66.9
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 1.4e-136 490.3 315 69.5
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 5.5e-136 488.4 383 61.6
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 1.0e-134 484.2 300 71.0
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 1.5e-133 480.3 397 58.2
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 7.4e-133 478.0 401 59.9
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 2.1e-132 476.5 337 65.9
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 1.2e-130 470.7 322 67.4
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.9e-128 463.4 401 58.9
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 4.6e-127 458.8 453 54.1
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 7.9e-127 458.0 402 55.5
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 1.5e-125 453.8 271 74.5
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 4.8e-124 448.7 333 64.0
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 4.2e-120 435.6 365 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 6.7e-118 428.3 335 57.0
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.9e-113 412.9 312 58.0
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 2.5e-112 409.8 301 63.5
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 3.0e-110 402.9 369 58.0
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 1.1e-109 401.0 268 71.3
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 3.7e-100 369.4 236 79.2
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 6.3e-100 368.6 229 80.8
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 5.9e-90 335.5 321 52.3
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 6.8e-86 322.0 296 53.4
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 3.4e-85 319.7 238 63.9
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 3.4e-85 319.7 238 63.9
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 3.7e-84 316.2 157 92.4
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 4.8e-84 315.8 327 46.5
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 8.3e-84 315.1 157 91.7
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 1.8e-83 313.9 178 76.4
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 5.4e-83 312.4 348 46.0
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 5.7e-77 292.4 157 82.8
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 2.8e-76 290.0 157 82.2
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 4.4e-69 266.2 359 38.4
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.9e-64 250.8 328 41.2
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 1.8e-46 191.0 106 77.4
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 4.2e-43 179.9 106 73.6
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 4.6e-42 176.4 141 58.9
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 1.0e-41 175.3 108 69.4
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 3.6e-39 166.8 343 33.2
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 1.5e-37 161.4 98 70.4
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.3e-31 141.7 330 30.6
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 4.0e-30 136.7 74 77.0
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 5.4e-27 126.3 73 72.6
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 4.8e-23 113.2 55 87.3
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 1.8e-22 111.3 129 46.5
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 6.2e-15 86.3 273 26.0
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 2.4e-14 84.3 107 46.7


User provided reference genes

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