Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.6e-92 342.8 179 100.0
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 2.3e-51 206.1 168 71.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 5.7e-50 201.4 162 74.7
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 9.7e-50 200.7 168 70.2
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.6e-49 199.9 173 68.2
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.9e-45 186.4 180 63.3
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 2.5e-45 186.0 183 62.3
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 9.4e-45 184.1 164 67.1
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 2.7e-44 182.6 179 58.7
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.8e-43 179.9 166 65.1
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 7.4e-42 174.5 146 66.4
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 9.1e-40 167.5 164 61.6
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 1.1e-34 150.6 164 55.5
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 5.7e-26 121.7 179 48.0
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 3.7e-25 119.0 136 50.7
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 4.8e-25 118.6 138 47.8
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 8.2e-25 117.9 165 47.9
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.1e-24 117.5 145 50.3
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 4.1e-24 115.5 123 49.6
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 7.0e-24 114.8 171 43.9
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 9.1e-24 114.4 176 44.9
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 9.1e-24 114.4 177 45.8
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 2.0e-23 113.2 137 51.1
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 2.0e-23 113.2 137 51.1
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 3.5e-23 112.5 163 43.6
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 4.5e-23 112.1 137 50.4
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 5.9e-23 111.7 178 42.7
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 5.9e-23 111.7 133 47.4
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 7.7e-23 111.3 125 51.2
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 7.7e-23 111.3 167 49.1
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.2e-22 109.8 173 42.8
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 5.0e-22 108.6 170 44.1
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 8.5e-22 107.8 133 48.9
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 8.5e-22 107.8 172 43.0
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 8.5e-22 107.8 125 51.2
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 2.5e-21 106.3 142 48.6
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 7.2e-21 104.8 156 45.5
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 7.2e-21 104.8 134 49.3
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 9.4e-21 104.4 115 59.1
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.2e-20 104.0 161 44.1
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.2e-20 104.0 187 40.6
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 1.2e-20 104.0 162 42.6
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.6e-20 103.6 149 49.0
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.6e-20 102.4 156 42.9
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 6.1e-20 101.7 128 49.2
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 8.0e-20 101.3 183 43.2
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 8.0e-20 101.3 160 41.2
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.8e-19 100.1 169 43.2
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.8e-19 100.1 126 47.6
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 3.0e-19 99.4 194 39.7
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 3.0e-19 99.4 180 42.2
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 6.8e-19 98.2 155 44.5
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 8.8e-19 97.8 111 53.2
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 8.8e-19 97.8 164 40.2
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 8.8e-19 97.8 188 41.5
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.2e-18 97.4 139 43.9
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.5e-18 97.1 193 39.9
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.5e-18 97.1 102 53.9
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.0e-18 96.7 192 39.1
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 2.0e-18 96.7 133 44.4
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 3.4e-18 95.9 126 47.6
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 4.4e-18 95.5 183 41.0
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 7.5e-18 94.7 89 55.1
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.7e-17 93.6 169 43.2
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 1.7e-17 93.6 197 38.6
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 2.2e-17 93.2 182 39.6
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 3.7e-17 92.4 194 38.1
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 6.3e-17 91.7 129 45.0
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 6.3e-17 91.7 188 36.7
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 4.1e-16 89.0 137 42.3
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 5.4e-16 88.6 135 47.4
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 7.0e-16 88.2 111 49.5
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 7.0e-16 88.2 120 45.0
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 9.1e-16 87.8 129 43.4
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.6e-15 87.0 135 43.7
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.0e-15 86.7 134 41.0
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.7e-15 86.3 120 43.3
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 5.9e-15 85.1 181 37.0
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.0e-14 84.3 173 37.6
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.7e-14 83.6 180 37.2
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 2.2e-14 83.2 131 42.0
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 2.9e-14 82.8 147 42.2
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 3.8e-14 82.4 210 35.2
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 3.8e-14 82.4 159 38.4
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 6.5e-14 81.6 174 37.9
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 8.5e-14 81.3 116 39.7
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 1.1e-13 80.9 191 35.6
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.2e-12 77.4 146 37.7
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.6e-12 77.0 47 76.6
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 3.6e-12 75.9 104 44.2
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 3.6e-12 75.9 130 38.5
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 8.8e-11 71.2 106 42.5
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.0e-10 70.1 64 54.7
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 5.7e-10 68.6 63 52.4
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 3.1e-08 62.8 95 40.0
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 2.0e-07 60.1 170 32.9
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 7.7e-07 58.2 133 35.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 6.6e-06 55.1 148 34.5


User provided reference genes

Program Settings