Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR290780 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.1e-109 399.1 207 100.0
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 5.7e-86 321.2 208 82.2
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 4.1e-84 315.1 208 79.8
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 9.1e-84 313.9 208 81.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 1.2e-83 313.5 207 80.7
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 7.7e-83 310.8 208 79.8
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 1.7e-82 309.7 205 78.0
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 3.1e-76 288.9 208 73.1
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 3.1e-76 288.9 208 73.1
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 2.6e-75 285.8 205 74.6
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 4.5e-75 285.0 207 72.5
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 1.1e-73 280.4 205 73.7
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 3.1e-68 262.3 209 67.9
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 9.1e-68 260.8 209 67.0
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 2.3e-63 246.1 206 65.5
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 2.3e-63 246.1 206 65.5
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 5.2e-63 245.0 204 65.7
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 5.2e-63 245.0 204 65.7
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 4.4e-46 188.7 209 49.8
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.7e-42 176.8 210 46.2
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 4.3e-41 172.2 220 45.5
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.8e-39 166.8 205 46.3
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 5.2e-39 165.2 216 44.0
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 3.4e-38 162.5 216 42.1
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 5.8e-38 161.8 224 43.8
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 4.9e-37 158.7 224 44.6
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 6.4e-37 158.3 210 41.9
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.9e-36 156.8 215 38.6
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 2.4e-36 156.4 219 38.8
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 4.1e-36 155.6 220 43.2
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 5.4e-36 155.2 211 41.2
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 7.0e-36 154.8 227 37.0
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 1.6e-35 153.7 219 38.4
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.6e-35 153.7 211 41.2
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 2.0e-35 153.3 216 39.8
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 2.7e-35 152.9 221 39.4
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 3.5e-35 152.5 210 39.0
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 4.6e-35 152.1 216 39.8
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 4.6e-35 152.1 199 40.7
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 4.6e-35 152.1 208 41.3
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 1.7e-34 150.2 216 39.4
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 2.3e-34 149.8 211 40.3
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 2.3e-34 149.8 211 42.7
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 4.3e-33 145.6 217 36.9
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.2e-32 144.1 217 37.3
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.2e-32 144.1 222 39.6
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 1.6e-32 143.7 217 37.3
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.1e-32 143.3 218 39.9
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.1e-32 143.3 197 43.1
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 2.8e-32 142.9 199 42.2
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 6.2e-32 141.7 209 37.3
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 8.0e-32 141.4 215 38.1
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 8.0e-32 141.4 232 39.7
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 8.0e-32 141.4 197 42.6
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.1e-31 141.0 213 39.0
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.8e-31 140.2 209 37.3
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.3e-31 139.8 210 39.5
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.3e-31 139.8 198 42.4
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 3.1e-31 139.4 211 39.3
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 5.2e-31 138.7 216 39.8
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 8.9e-31 137.9 217 37.8
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.5e-30 137.1 215 36.7
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 2.6e-30 136.3 223 41.3
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.2e-29 133.3 200 39.5
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.2e-29 133.3 213 36.2
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 3.7e-29 132.5 212 34.4
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 8.3e-29 131.3 225 35.6
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 8.3e-29 131.3 200 39.5
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.1e-28 131.0 217 36.4
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 1.9e-28 130.2 201 36.8
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 3.2e-28 129.4 229 34.1
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 9.2e-28 127.9 214 35.0
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 1.2e-27 127.5 204 36.3
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 4.6e-27 125.6 227 33.9
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 6.0e-27 125.2 198 36.4
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.7e-26 123.6 179 39.7
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 2.3e-26 123.2 229 35.8
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.3e-26 123.2 215 34.0
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 3.9e-26 122.5 224 33.5
FvH4_5g29932 Fragaria vesca HOM05D002759 ORTHO05D003290 6.6e-26 121.7 213 32.9
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-25 120.9 213 33.8
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-25 120.9 214 33.6
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.5e-25 120.6 215 33.0
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 1.5e-25 120.6 222 34.2
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 5.6e-25 118.6 201 33.3
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 5.6e-25 118.6 201 33.3
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 9.5e-25 117.9 172 35.5
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 1.6e-24 117.1 224 32.6
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 3.6e-24 115.9 236 29.7
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.2e-24 115.2 236 29.7
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 8.1e-24 114.8 216 32.9
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.1e-23 114.4 232 34.1
FAN18G4196 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.4e-23 114.0 212 30.7
BcaC09g51042 Brassica carinata HOM05D002759 ORTHO05D039131 1.8e-23 113.6 96 64.6
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 3.1e-23 112.8 209 30.6
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 5.2e-23 112.1 206 35.9
CARHR254470 Cardamine hirsuta HOM05D002759 ORTHO05D003290 6.8e-23 111.7 120 49.2
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 2.6e-22 109.8 236 33.1
Hund17372 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.3e-21 107.5 209 35.4
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.7e-21 107.1 223 32.3
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 3.7e-21 105.9 215 34.4
A01p14270 Brassica napus HOM05D002759 ORTHO05D039131 3.2e-20 102.8 108 55.6
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.1e-20 102.4 224 32.1
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.6e-19 100.5 243 31.7
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.6e-16 90.5 129 38.0
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 1.2e-14 84.3 122 41.8
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.7e-13 80.5 228 32.9
CSS0019427 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 9.2e-12 74.7 112 36.6
C01p17530 Brassica napus HOM05D050466 ORTHO05D039285 4.0e-07 59.3 64 56.2
BcaC09g51045 Brassica carinata HOM05D050466 ORTHO05D039285 5.3e-07 58.9 61 59.0


User provided reference genes

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