Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.6e-197 692.6 350 100.0
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.6e-197 692.6 350 100.0
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.0e-135 487.3 253 100.0
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.0e-135 487.3 253 100.0
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.0e-135 487.3 253 100.0
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 2.5e-134 482.6 253 98.8
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 2.5e-134 482.6 253 98.8
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 2.5e-134 482.6 253 98.8
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 2.5e-134 482.6 253 98.8
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 2.5e-134 482.6 253 98.8
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 1.8e-132 476.5 254 98.0
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 3.3e-126 455.7 266 89.1
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 2.3e-124 449.5 256 91.4
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 1.9e-121 439.9 254 90.6
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 7.3e-118 427.9 240 92.9
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 5.8e-115 418.3 254 86.6
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 8.3e-114 414.5 270 83.0
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 1.2e-112 410.6 253 87.0
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 2.7e-112 409.5 239 89.5
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 3.0e-111 406.0 252 85.3
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 1.2e-109 400.6 254 83.9
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.5e-107 393.7 285 76.1
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 3.4e-107 392.5 252 82.1
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.7e-106 390.2 285 75.8
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 3.2e-105 386.0 256 80.9
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 7.1e-105 384.8 239 85.8
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 6.6e-103 378.3 239 84.5
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.8e-100 370.2 252 79.0
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 2.4e-100 369.8 239 83.7
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 4.4e-99 365.5 329 63.5
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 1.5e-94 350.5 361 58.4
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 1.6e-93 347.1 254 75.2
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 2.6e-91 339.7 252 75.8
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 7.6e-91 338.2 251 75.7
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 9.9e-91 337.8 215 84.2
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 6.4e-90 335.1 252 74.6
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.9e-86 323.6 254 72.0
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 7.3e-86 321.6 238 76.1
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 3.1e-84 316.2 168 99.4
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.6e-80 303.9 223 77.1
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 3.5e-80 302.8 226 73.9
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 3.0e-79 299.7 193 82.9
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 8.7e-79 298.1 223 74.4
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 8.7e-79 298.1 223 74.4
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-78 297.4 223 74.4
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 9.9e-75 284.6 254 65.0
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 4.2e-65 252.7 223 66.4
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 9.3e-65 251.5 169 82.2
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 1.1e-60 238.0 147 87.8
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 1.1e-49 201.4 134 77.6
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.5e-46 191.0 172 62.8
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 2.0e-46 190.7 105 89.5
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 7.4e-46 188.7 253 50.6
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-44 184.1 134 78.4
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-44 184.1 134 78.4
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 9.1e-44 181.8 132 78.8
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 6.5e-42 175.6 135 68.9
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 8.5e-42 175.3 129 75.2
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 3.2e-41 173.3 134 76.1
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 7.2e-41 172.2 101 86.1
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 9.4e-41 171.8 105 81.9
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 3.6e-40 169.9 166 60.8
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-39 167.9 104 80.8
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 6.7e-39 165.6 128 75.8
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 9.7e-38 161.8 126 70.6
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 1.3e-37 161.4 89 88.8
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-37 161.0 104 79.8
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 2.8e-37 160.2 106 77.4
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 4.8e-37 159.5 91 84.6
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.6e-35 154.5 107 71.0
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 2.6e-35 153.7 91 92.3
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 2.5e-33 147.1 239 43.9
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 4.2e-33 146.4 147 63.3
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 6.1e-32 142.5 76 89.5
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 8.0e-32 142.1 79 87.3
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 1.5e-30 137.9 90 77.8
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 4.1e-28 129.8 157 54.1
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 5.3e-28 129.4 101 71.3
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 9.1e-28 128.6 193 49.2
Mapoly1449s0001 Marchantia polymorpha HOM05D006604 ORTHO05D007974 3.5e-27 126.7 209 36.4
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 3.2e-25 120.2 126 60.3
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 3.2e-25 120.2 126 60.3
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 4.7e-24 116.3 151 51.0
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.8e-23 114.4 141 50.4
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 5.2e-23 112.8 70 84.3
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 1.5e-22 111.3 70 82.9
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 2.0e-22 110.9 70 84.3
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 2.0e-22 110.9 210 41.0
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 2.6e-22 110.5 88 68.2
MD15G1429600 Malus domestica HOM05D006604 ORTHO05D007974 9.8e-22 108.6 73 80.8
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 8.3e-21 105.5 67 85.1
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 1.1e-20 105.1 69 81.2
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 1.8e-20 104.4 73 75.3
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.2e-19 101.7 63 79.4
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 2.0e-19 100.9 69 78.3
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 2.0e-19 100.9 87 66.7
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 3.5e-19 100.1 103 60.2
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 5.9e-19 99.4 136 45.6
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 7.7e-19 99.0 65 73.8
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-17 95.1 64 73.4
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 8.0e-16 89.0 62 75.8
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 1.4e-15 88.2 146 43.8
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.0e-15 87.0 57 84.2
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 4.0e-15 86.7 51 90.2
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 1.5e-14 84.7 154 39.0
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 2.6e-14 84.0 61 75.4
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 4.1e-12 76.6 64 59.4
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-11 75.1 65 60.0
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 2.0e-11 74.3 47 76.6
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.5e-11 73.2 44 84.1
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 4.5e-11 73.2 56 67.9
SHI37140 Sapria himalayana HOM05D006604 ORTHO05D007974 3.9e-10 70.1 45 77.8
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 6.6e-10 69.3 91 47.3
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 6.6e-10 69.3 45 84.4
EL10Ac8g19070 Beta vulgaris HOM05D007194 ORTHO05D009182 8.6e-10 68.9 140 33.6
BolC1t03453H Brassica oleracea HOM05D013555 ORTHO05D007974 1.9e-09 67.8 79 50.6
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 2.5e-09 67.4 38 94.7
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 4.3e-09 66.6 44 70.5
SHI36463 Sapria himalayana HOM05D006604 ORTHO05D007974 4.3e-09 66.6 43 79.1
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 9.5e-09 65.5 138 33.3
ECA003G0002 Erigeron canadensis HOM05D006604 ORTHO05D007974 2.1e-08 64.3 35 97.1
CARHR288260 Cardamine hirsuta HOM05D006604 ORTHO05D007974 4.7e-08 63.2 30 96.7
SHI31173 Sapria himalayana HOM05D006604 ORTHO05D007974 1.0e-07 62.0 168 33.9
MELO3C000965.2 Cucumis melo HOM05D006604 ORTHO05D007974 3.1e-07 60.5 47 68.1
Medtr0248s0030 Medicago truncatula HOM05D006604 ORTHO05D007974 4.4e-06 56.6 31 93.5
SHI36366 Sapria himalayana HOM05D006604 ORTHO05D007974 9.8e-06 55.5 32 81.2


User provided reference genes

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