Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 8.7e-50 199.9 95 100.0
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 8.7e-50 199.9 95 100.0
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 3.1e-39 164.9 98 83.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.8e-37 157.9 75 100.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.1e-35 150.6 96 80.2
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.4e-34 149.4 70 100.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.7e-32 141.4 71 95.8
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-31 139.8 69 97.1
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 3.5e-30 134.8 63 100.0
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 3.5e-30 134.8 63 100.0
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 3.5e-30 134.8 63 100.0
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 3.5e-30 134.8 63 100.0
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 5.9e-30 134.0 73 87.7
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 1.3e-29 132.9 63 98.4
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 1.1e-28 129.8 63 96.8
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.5e-28 129.4 63 95.2
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 2.5e-28 128.6 63 95.2
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 2.5e-28 128.6 63 95.2
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 9.4e-28 126.7 61 96.7
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 3.6e-27 124.8 77 80.5
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.4e-26 122.9 58 98.3
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.8e-26 122.5 77 79.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-26 122.5 76 81.6
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-26 122.5 76 81.6
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-26 122.5 76 81.6
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-26 122.5 76 81.6
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 2.3e-26 122.1 59 94.9
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 2.3e-26 122.1 62 91.9
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 3.0e-26 121.7 56 100.0
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 8.8e-26 120.2 80 75.0
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 3.3e-25 118.2 57 96.5
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 7.5e-25 117.1 58 93.1
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-23 113.2 77 75.3
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 2.7e-22 108.6 71 77.5
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 5.9e-22 107.5 52 94.2
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.9e-22 107.5 52 94.2
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.9e-22 107.5 52 94.2
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 7.2e-20 100.5 70 71.4
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 8.8e-18 93.6 51 88.2
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 1.1e-15 86.7 65 67.7
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.4e-15 86.3 64 71.9
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 5.4e-15 84.3 47 85.1
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 6.5e-13 77.4 61 67.2
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 1.5e-12 76.3 36 97.2
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.2e-12 73.9 75 56.0
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.6e-11 72.8 66 62.1
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 4.0e-10 68.2 35 91.4
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 8.8e-10 67.0 61 59.0
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 2.0e-09 65.9 42 78.6
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 2.6e-09 65.5 34 88.2
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 4.4e-09 64.7 37 81.1
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 9.8e-09 63.5 41 78.0
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.3e-08 63.2 54 63.0
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 1.7e-08 62.8 41 75.6
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.8e-08 62.0 32 90.6
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.7e-08 61.6 59 61.0
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 4.9e-08 61.2 51 62.7
Lalb_Chr08g0236231 Lupinus albus HOM05D001966 ORTHO05D010986 6.3e-08 60.8 32 87.5
Lalb_Chr24g0400891 Lupinus albus HOM05D001966 ORTHO05D010986 6.3e-08 60.8 32 87.5
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 8.3e-08 60.5 41 73.2
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 1.1e-07 60.1 43 69.8
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.1e-07 60.1 41 73.2
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-07 59.7 33 81.8
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 3.5e-06 55.1 28 89.3


User provided reference genes

Program Settings